RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 SMIM20Q8N5G0 67 aa10.74□□□□□ -0.69
CHRNA4-203ENST00000467563 MMP24-AS1A0A0U1RRL7 71 aa10.73□□□□□ -0.69
CHRNA4-203ENST00000467563 IGHV6-1A0A0B4J1U7 121 aa10.73□□□□□ -0.69
CHRNA4-203ENST00000467563 OCR1Q9BZK8 76 aa10.73□□□□□ -0.69
CHRNA4-203ENST00000467563 CASC2Q6XLA1 102 aa10.72□□□□□ -0.69
CHRNA4-203ENST00000467563 LRP1Q07954 4544 aaKnown RBP10.71□□□□□ -0.69
CHRNA4-203ENST00000467563 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
CHRNA4-203ENST00000467563 Q8N1X5 172 aa10.7□□□□□ -0.7
CHRNA4-203ENST00000467563 C8orf17Q9NRJ1 99 aa10.7□□□□□ -0.7
CHRNA4-203ENST00000467563 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
CHRNA4-203ENST00000467563 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
CHRNA4-203ENST00000467563 hDV103S1A0JD37 113 aa10.67□□□□□ -0.7
CHRNA4-203ENST00000467563 TNXBP22105 4242 aa10.64□□□□□ -0.71
CHRNA4-203ENST00000467563 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
CHRNA4-203ENST00000467563 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
CHRNA4-203ENST00000467563 FAT3Q8TDW7 4589 aa10.61□□□□□ -0.71
CHRNA4-203ENST00000467563 C20orf197Q8N268 126 aa10.61□□□□□ -0.71
CHRNA4-203ENST00000467563 CYSTM1Q9H1C7 97 aa10.61□□□□□ -0.71
CHRNA4-203ENST00000467563 MYCBP2O75592 4640 aa10.57□□□□□ -0.72
CHRNA4-203ENST00000467563 C8orf87E5RJ46 101 aa10.56□□□□□ -0.72
CHRNA4-203ENST00000467563 TMEM254Q8TBM7 123 aa10.56□□□□□ -0.72
CHRNA4-203ENST00000467563 MRPL34Q9BQ48 92 aaKnown RBP10.56□□□□□ -0.72
CHRNA4-203ENST00000467563 LINC00313P59037 77 aa10.54□□□□□ -0.72
CHRNA4-203ENST00000467563 SNURFQ9Y675 71 aa10.54□□□□□ -0.72
CHRNA4-203ENST00000467563 KLKP1Q107X0 134 aa10.52□□□□□ -0.73
CHRNA4-203ENST00000467563 KRTAP4-5Q9BYR2 181 aa10.51□□□□□ -0.73
CHRNA4-203ENST00000467563 NDUFS5O43920 106 aa10.49□□□□□ -0.73
CHRNA4-203ENST00000467563 C5orf47Q569G3 176 aa10.49□□□□□ -0.73
CHRNA4-203ENST00000467563 A0A0U1RQV1 116 aa10.49□□□□□ -0.73
CHRNA4-203ENST00000467563 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
CHRNA4-203ENST00000467563 MT1HL1P0DM35 61 aa10.48□□□□□ -0.73
CHRNA4-203ENST00000467563 KRTAP16-1A8MUX0 517 aa10.47□□□□□ -0.73
CHRNA4-203ENST00000467563 TP53AIP1Q9HCN2 124 aa10.46□□□□□ -0.73
CHRNA4-203ENST00000467563 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
CHRNA4-203ENST00000467563 H0Y9P7 68 aa10.43□□□□□ -0.74
CHRNA4-203ENST00000467563 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
CHRNA4-203ENST00000467563 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
CHRNA4-203ENST00000467563 TRAV22A0A0B4J277 110 aa10.42□□□□□ -0.74
CHRNA4-203ENST00000467563 H7BZZ5 65 aa10.42□□□□□ -0.74
CHRNA4-203ENST00000467563 MP68P56378 58 aa10.42□□□□□ -0.74
CHRNA4-203ENST00000467563 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
CHRNA4-203ENST00000467563 LINC00208Q96KT6 92 aa10.38□□□□□ -0.75
CHRNA4-203ENST00000467563 Q5W150 140 aa10.37□□□□□ -0.75
CHRNA4-203ENST00000467563 OXTP01178 125 aa10.35□□□□□ -0.75
CHRNA4-203ENST00000467563 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
CHRNA4-203ENST00000467563 NDUFC1O43677 76 aa10.35□□□□□ -0.75
CHRNA4-203ENST00000467563 H3BPC8 53 aa10.34□□□□□ -0.75
CHRNA4-203ENST00000467563 TMEM258P61165 79 aa10.34□□□□□ -0.75
CHRNA4-203ENST00000467563 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
CHRNA4-203ENST00000467563 HERC2O95714 4834 aa10.33□□□□□ -0.76
CHRNA4-203ENST00000467563 C1orf64Q8NEQ6 169 aa10.33□□□□□ -0.76
CHRNA4-203ENST00000467563 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
CHRNA4-203ENST00000467563 FP248Q71RG6 208 aaPredicted RBP10.27□□□□□ -0.77
CHRNA4-203ENST00000467563 FAM236DA0A1B0GTK5 79 aa10.22□□□□□ -0.77
CHRNA4-203ENST00000467563 FAM236CP0DP71 79 aa10.22□□□□□ -0.77
CHRNA4-203ENST00000467563 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
CHRNA4-203ENST00000467563 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
CHRNA4-203ENST00000467563 A8MUU9 505 aa10.21□□□□□ -0.77
CHRNA4-203ENST00000467563 LOC101927531A0A1B0GV80 90 aa10.19□□□□□ -0.78
CHRNA4-203ENST00000467563 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
CHRNA4-203ENST00000467563 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
CHRNA4-203ENST00000467563 PRR4Q16378 134 aa10.13□□□□□ -0.79
CHRNA4-203ENST00000467563 IGKV2-30P06310 120 aa10.13□□□□□ -0.79
CHRNA4-203ENST00000467563 ATP5EP56381 51 aaPredicted RBP10.13□□□□□ -0.79
CHRNA4-203ENST00000467563 Q75L30 129 aa10.11□□□□□ -0.79
CHRNA4-203ENST00000467563 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
CHRNA4-203ENST00000467563 J3QL48 77 aa10.08□□□□□ -0.8
CHRNA4-203ENST00000467563 IGKV2D-30A0A075B6S6 120 aa10.08□□□□□ -0.8
CHRNA4-203ENST00000467563 XP32Q5T750 250 aa10.07□□□□□ -0.8
CHRNA4-203ENST00000467563 RPS28P62857 69 aaKnown RBP10.02□□□□□ -0.81
CHRNA4-203ENST00000467563 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
CHRNA4-203ENST00000467563 RPL37P61927 97 aaKnown RBP10.01□□□□□ -0.81
CHRNA4-203ENST00000467563 TPRXLQ17RH7 258 aa10□□□□□ -0.81
CHRNA4-203ENST00000467563 HRES1P13985 223 aa10□□□□□ -0.81
CHRNA4-203ENST00000467563 C7orf65Q6ZTY9 151 aa9.99□□□□□ -0.81
CHRNA4-203ENST00000467563 ATP11AUNQ6ZP68 121 aa9.95□□□□□ -0.82
CHRNA4-203ENST00000467563 LPAP08519 4548 aa9.95□□□□□ -0.82
CHRNA4-203ENST00000467563 PCLOQ9Y6V0 5065 aa9.94□□□□□ -0.82
CHRNA4-203ENST00000467563 SPINK7P58062 85 aa9.91□□□□□ -0.82
CHRNA4-203ENST00000467563 LRP2P98164 4655 aa9.91□□□□□ -0.82
CHRNA4-203ENST00000467563 SVIPQ8NHG7 77 aa9.91□□□□□ -0.82
CHRNA4-203ENST00000467563 DMAC1Q96GE9 116 aa9.84□□□□□ -0.83
CHRNA4-203ENST00000467563 C4orf26Q17RF5 130 aa9.83□□□□□ -0.84
CHRNA4-203ENST00000467563 COA5Q86WW8 74 aa9.83□□□□□ -0.84
CHRNA4-203ENST00000467563 ACYP2P14621 99 aa9.78□□□□□ -0.84
CHRNA4-203ENST00000467563 HERC1Q15751 4861 aa9.77□□□□□ -0.85
CHRNA4-203ENST00000467563 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
CHRNA4-203ENST00000467563 KRTAP3-1Q9BYR8 98 aa9.71□□□□□ -0.86
CHRNA4-203ENST00000467563 A8MUN3 132 aa9.68□□□□□ -0.86
CHRNA4-203ENST00000467563 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
CHRNA4-203ENST00000467563 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
CHRNA4-203ENST00000467563 SEC61BP60468 96 aaKnown RBP9.63□□□□□ -0.87
CHRNA4-203ENST00000467563 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
CHRNA4-203ENST00000467563 CHKB-CPT1BH3BT56 60 aa9.62□□□□□ -0.87
CHRNA4-203ENST00000467563 Q1T7F1 81 aa9.57□□□□□ -0.88
CHRNA4-203ENST00000467563 MUC17Q685J3 4493 aa9.53□□□□□ -0.88
CHRNA4-203ENST00000467563 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.88
CHRNA4-203ENST00000467563 V9GYY9 64 aa9.47□□□□□ -0.89
CHRNA4-203ENST00000467563 LINC01558Q9Y6Z2 57 aa9.44□□□□□ -0.9
CHRNA4-203ENST00000467563 PSPHP1O15172 72 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms