RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 CCKP06307 115 aa3.88□□□□□ -1.79
UBXN4-205ENST00000467065 ACYP1P07311 99 aa3.88□□□□□ -1.79
UBXN4-205ENST00000467065 CDIP1Q9H305 208 aa3.88□□□□□ -1.79
UBXN4-205ENST00000467065 IMUPQ9GZP8 106 aa3.87□□□□□ -1.79
UBXN4-205ENST00000467065 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
UBXN4-205ENST00000467065 IGLV8-61A0A075B6I0 122 aa3.86□□□□□ -1.79
UBXN4-205ENST00000467065 TRBV7-4A0A0J9YYF1 115 aa3.86□□□□□ -1.79
UBXN4-205ENST00000467065 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
UBXN4-205ENST00000467065 SMIM29Q86T20 159 aa3.86□□□□□ -1.79
UBXN4-205ENST00000467065 RPS29P62273 56 aaKnown RBP3.85□□□□□ -1.79
UBXN4-205ENST00000467065 NREPQ16612 68 aa3.85□□□□□ -1.79
UBXN4-205ENST00000467065 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
UBXN4-205ENST00000467065 IGFL1Q6UW32 110 aa3.85□□□□□ -1.79
UBXN4-205ENST00000467065 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
UBXN4-205ENST00000467065 LOC110117498A0A087WWA1 95 aa3.84□□□□□ -1.79
UBXN4-205ENST00000467065 TRBV7-7A0A0K0K1E9 115 aa3.84□□□□□ -1.79
UBXN4-205ENST00000467065 PRR4Q16378 134 aa3.84□□□□□ -1.79
UBXN4-205ENST00000467065 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
UBXN4-205ENST00000467065 NDUFB1O75438 58 aa3.83□□□□□ -1.8
UBXN4-205ENST00000467065 A0A087WSZ3 146 aa3.82□□□□□ -1.8
UBXN4-205ENST00000467065 J3KT08 172 aa3.82□□□□□ -1.8
UBXN4-205ENST00000467065 Q6ZQT0 140 aa3.81□□□□□ -1.8
UBXN4-205ENST00000467065 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
UBXN4-205ENST00000467065 MT-ATP8P03928 68 aa3.8□□□□□ -1.8
UBXN4-205ENST00000467065 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-205ENST00000467065 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
UBXN4-205ENST00000467065 A0A0G2JQZ4 141 aa3.79□□□□□ -1.8
UBXN4-205ENST00000467065 Q5XG85 94 aa3.79□□□□□ -1.8
UBXN4-205ENST00000467065 RETNLBQ9BQ08 111 aa3.79□□□□□ -1.8
UBXN4-205ENST00000467065 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
UBXN4-205ENST00000467065 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
UBXN4-205ENST00000467065 A0A1W2PNM2 257 aa3.78□□□□□ -1.8
UBXN4-205ENST00000467065 BPY2O14599 106 aa3.78□□□□□ -1.8
UBXN4-205ENST00000467065 IGKV4-1P06312 121 aa3.78□□□□□ -1.8
UBXN4-205ENST00000467065 LINC00643Q86TS7 51 aa3.78□□□□□ -1.8
UBXN4-205ENST00000467065 ASB16-AS1Q495Z4 193 aa3.77□□□□□ -1.81
UBXN4-205ENST00000467065 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
UBXN4-205ENST00000467065 C1orf195Q5TG92 126 aa3.74□□□□□ -1.81
UBXN4-205ENST00000467065 IGHV6-1A0A0B4J1U7 121 aa3.73□□□□□ -1.81
UBXN4-205ENST00000467065 UQCRQO14949 82 aa3.73□□□□□ -1.81
UBXN4-205ENST00000467065 LINC00313P59037 77 aa3.73□□□□□ -1.81
UBXN4-205ENST00000467065 ATP5EP2Q5VTU8 51 aa3.73□□□□□ -1.81
UBXN4-205ENST00000467065 MUC2Q02817 5179 aa3.73□□□□□ -1.81
UBXN4-205ENST00000467065 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
UBXN4-205ENST00000467065 C8orf87E5RJ46 101 aa3.72□□□□□ -1.81
UBXN4-205ENST00000467065 ATOX1O00244 68 aa3.72□□□□□ -1.81
UBXN4-205ENST00000467065 Q6ZVQ6 151 aa3.72□□□□□ -1.81
UBXN4-205ENST00000467065 A8MWP4 228 aa3.71□□□□□ -1.82
UBXN4-205ENST00000467065 HIST1H4AP62805 103 aaKnown RBP3.71□□□□□ -1.82
UBXN4-205ENST00000467065 TPRXLQ17RH7 258 aa3.71□□□□□ -1.82
UBXN4-205ENST00000467065 LINC00846Q9NV44 126 aa3.71□□□□□ -1.82
UBXN4-205ENST00000467065 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
UBXN4-205ENST00000467065 C9orf92A6NGG3 77 aa3.7□□□□□ -1.82
UBXN4-205ENST00000467065 CXCL6P80162 114 aa3.7□□□□□ -1.82
UBXN4-205ENST00000467065 ATP11AUNQ6ZP68 121 aa3.7□□□□□ -1.82
UBXN4-205ENST00000467065 Q96NJ1 140 aa3.7□□□□□ -1.82
UBXN4-205ENST00000467065 LINC00472Q9H8W2 130 aa3.7□□□□□ -1.82
UBXN4-205ENST00000467065 A0A1B0GVX0 72 aa3.69□□□□□ -1.82
UBXN4-205ENST00000467065 NDUFS5O43920 106 aa3.69□□□□□ -1.82
UBXN4-205ENST00000467065 RPS28P62857 69 aaKnown RBP3.69□□□□□ -1.82
UBXN4-205ENST00000467065 A0A0U1RQV1 116 aa3.68□□□□□ -1.82
UBXN4-205ENST00000467065 COX7CP15954 63 aa3.68□□□□□ -1.82
UBXN4-205ENST00000467065 PRR15Q8IV56 129 aa3.68□□□□□ -1.82
UBXN4-205ENST00000467065 FAM236AA0A1B0GUQ0 79 aa3.67□□□□□ -1.82
UBXN4-205ENST00000467065 FAM236BA0A1B0GV22 79 aa3.67□□□□□ -1.82
UBXN4-205ENST00000467065 SEC61BP60468 96 aaKnown RBP3.67□□□□□ -1.82
UBXN4-205ENST00000467065 SMIM20Q8N5G0 67 aa3.67□□□□□ -1.82
UBXN4-205ENST00000467065 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
UBXN4-205ENST00000467065 CCDC179H3BU77 68 aa3.66□□□□□ -1.82
UBXN4-205ENST00000467065 KRTAP13-3Q3SY46 172 aa3.66□□□□□ -1.82
UBXN4-205ENST00000467065 CASC2Q6XLA1 102 aa3.66□□□□□ -1.82
UBXN4-205ENST00000467065 hDV103S1A0JD37 113 aa3.65□□□□□ -1.83
UBXN4-205ENST00000467065 DSCR10P59022 87 aa3.65□□□□□ -1.83
UBXN4-205ENST00000467065 TMEM258P61165 79 aa3.65□□□□□ -1.83
UBXN4-205ENST00000467065 C8orf17Q9NRJ1 99 aa3.65□□□□□ -1.83
UBXN4-205ENST00000467065 K7EQZ3 153 aa3.64□□□□□ -1.83
UBXN4-205ENST00000467065 SERP2Q8N6R1 65 aa3.64□□□□□ -1.83
UBXN4-205ENST00000467065 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
UBXN4-205ENST00000467065 WFDC13Q8IUB5 93 aa3.62□□□□□ -1.83
UBXN4-205ENST00000467065 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
UBXN4-205ENST00000467065 MRPL34Q9BQ48 92 aaKnown RBP3.62□□□□□ -1.83
UBXN4-205ENST00000467065 TP53AIP1Q9HCN2 124 aa3.62□□□□□ -1.83
UBXN4-205ENST00000467065 Q75L30 129 aa3.61□□□□□ -1.83
UBXN4-205ENST00000467065 Q8N9L7 120 aa3.61□□□□□ -1.83
UBXN4-205ENST00000467065 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
UBXN4-205ENST00000467065 NDUFC1O43677 76 aa3.59□□□□□ -1.83
UBXN4-205ENST00000467065 ATP5EP56381 51 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-205ENST00000467065 TRAV7A0A075B6U4 112 aa3.58□□□□□ -1.84
UBXN4-205ENST00000467065 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
UBXN4-205ENST00000467065 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
UBXN4-205ENST00000467065 MP68P56378 58 aa3.57□□□□□ -1.84
UBXN4-205ENST00000467065 KLKP1Q107X0 134 aa3.57□□□□□ -1.84
UBXN4-205ENST00000467065 C20orf166-AS1Q96NR2 134 aa3.57□□□□□ -1.84
UBXN4-205ENST00000467065 A8MUU9 505 aa3.56□□□□□ -1.84
UBXN4-205ENST00000467065 PCOTHQ58A44 107 aa3.56□□□□□ -1.84
UBXN4-205ENST00000467065 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
UBXN4-205ENST00000467065 Q8N9P0 234 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-205ENST00000467065 ZCCHC13Q8WW36 166 aaKnown RBP3.55□□□□□ -1.84
UBXN4-205ENST00000467065 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
UBXN4-205ENST00000467065 C5orf47Q569G3 176 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms