RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
VPS16-206ENST00000466415 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
VPS16-206ENST00000466415 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
VPS16-206ENST00000466415 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
VPS16-206ENST00000466415 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
VPS16-206ENST00000466415 PCP4P48539 62 aa6.85□□□□□ -1.31
VPS16-206ENST00000466415 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
VPS16-206ENST00000466415 A0A087WVE0 104 aa6.84□□□□□ -1.31
VPS16-206ENST00000466415 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
VPS16-206ENST00000466415 FP248Q71RG6 208 aaPredicted RBP6.82□□□□□ -1.32
VPS16-206ENST00000466415 HCG22E2RYF7 251 aa6.81□□□□□ -1.32
VPS16-206ENST00000466415 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
VPS16-206ENST00000466415 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
VPS16-206ENST00000466415 MMP24-AS1A0A0U1RRL7 71 aa6.78□□□□□ -1.32
VPS16-206ENST00000466415 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
VPS16-206ENST00000466415 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
VPS16-206ENST00000466415 LINC00313P59037 77 aa6.78□□□□□ -1.32
VPS16-206ENST00000466415 PRR4Q16378 134 aa6.78□□□□□ -1.32
VPS16-206ENST00000466415 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
VPS16-206ENST00000466415 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
VPS16-206ENST00000466415 hDV103S1A0JD37 113 aa6.76□□□□□ -1.33
VPS16-206ENST00000466415 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
VPS16-206ENST00000466415 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
VPS16-206ENST00000466415 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
VPS16-206ENST00000466415 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
VPS16-206ENST00000466415 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
VPS16-206ENST00000466415 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
VPS16-206ENST00000466415 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
VPS16-206ENST00000466415 ATOX1O00244 68 aa6.71□□□□□ -1.34
VPS16-206ENST00000466415 NDUFS5O43920 106 aa6.71□□□□□ -1.34
VPS16-206ENST00000466415 DMBT1Q9UGM3 2413 aaPredicted RBP6.7□□□□□ -1.34
VPS16-206ENST00000466415 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
VPS16-206ENST00000466415 SMIM20Q8N5G0 67 aa6.67□□□□□ -1.34
VPS16-206ENST00000466415 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
VPS16-206ENST00000466415 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.34
VPS16-206ENST00000466415 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
VPS16-206ENST00000466415 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
VPS16-206ENST00000466415 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
VPS16-206ENST00000466415 ANAPC13Q9BS18 74 aa6.63□□□□□ -1.35
VPS16-206ENST00000466415 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
VPS16-206ENST00000466415 UQCRQO14949 82 aa6.61□□□□□ -1.35
VPS16-206ENST00000466415 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
VPS16-206ENST00000466415 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
VPS16-206ENST00000466415 A8MUU9 505 aa6.6□□□□□ -1.35
VPS16-206ENST00000466415 XP32Q5T750 250 aa6.6□□□□□ -1.35
VPS16-206ENST00000466415 Q75L30 129 aa6.59□□□□□ -1.35
VPS16-206ENST00000466415 SERP2Q8N6R1 65 aa6.59□□□□□ -1.35
VPS16-206ENST00000466415 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
VPS16-206ENST00000466415 MP68P56378 58 aa6.56□□□□□ -1.36
VPS16-206ENST00000466415 RPL37P61927 97 aaKnown RBP6.56□□□□□ -1.36
VPS16-206ENST00000466415 H0Y9P7 68 aa6.55□□□□□ -1.36
VPS16-206ENST00000466415 COX7CP15954 63 aa6.54□□□□□ -1.36
VPS16-206ENST00000466415 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
VPS16-206ENST00000466415 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
VPS16-206ENST00000466415 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
VPS16-206ENST00000466415 Q5W150 140 aa6.5□□□□□ -1.37
VPS16-206ENST00000466415 H3BPC8 53 aa6.49□□□□□ -1.37
VPS16-206ENST00000466415 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
VPS16-206ENST00000466415 LINC00208Q96KT6 92 aa6.48□□□□□ -1.37
VPS16-206ENST00000466415 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
VPS16-206ENST00000466415 LOC101927531A0A1B0GV80 90 aa6.46□□□□□ -1.38
VPS16-206ENST00000466415 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
VPS16-206ENST00000466415 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
VPS16-206ENST00000466415 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
VPS16-206ENST00000466415 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
VPS16-206ENST00000466415 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
VPS16-206ENST00000466415 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
VPS16-206ENST00000466415 LPAP08519 4548 aa6.45□□□□□ -1.38
VPS16-206ENST00000466415 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
VPS16-206ENST00000466415 HERC1Q15751 4861 aa6.44□□□□□ -1.38
VPS16-206ENST00000466415 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
VPS16-206ENST00000466415 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
VPS16-206ENST00000466415 HMCN2Q8NDA2 5059 aa6.4□□□□□ -1.39
VPS16-206ENST00000466415 SPINK7P58062 85 aa6.38□□□□□ -1.39
VPS16-206ENST00000466415 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
VPS16-206ENST00000466415 NDUFC1O43677 76 aa6.37□□□□□ -1.39
VPS16-206ENST00000466415 LRP2P98164 4655 aa6.34□□□□□ -1.39
VPS16-206ENST00000466415 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
VPS16-206ENST00000466415 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
VPS16-206ENST00000466415 H7BZZ5 65 aa6.3□□□□□ -1.4
VPS16-206ENST00000466415 HRES1P13985 223 aa6.29□□□□□ -1.4
VPS16-206ENST00000466415 TMEM258P61165 79 aa6.25□□□□□ -1.41
VPS16-206ENST00000466415 C4orf26Q17RF5 130 aa6.25□□□□□ -1.41
VPS16-206ENST00000466415 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
VPS16-206ENST00000466415 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
VPS16-206ENST00000466415 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
VPS16-206ENST00000466415 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
VPS16-206ENST00000466415 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
VPS16-206ENST00000466415 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
VPS16-206ENST00000466415 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
VPS16-206ENST00000466415 A8MUN3 132 aa6.18□□□□□ -1.42
VPS16-206ENST00000466415 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
VPS16-206ENST00000466415 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
VPS16-206ENST00000466415 ACYP2P14621 99 aa6.15□□□□□ -1.42
VPS16-206ENST00000466415 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
VPS16-206ENST00000466415 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
VPS16-206ENST00000466415 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
VPS16-206ENST00000466415 COA5Q86WW8 74 aa6.08□□□□□ -1.44
VPS16-206ENST00000466415 S4R3F8 94 aa6.06□□□□□ -1.44
VPS16-206ENST00000466415 SERP1Q9Y6X1 66 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms