RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 DDX60LQ5H9U9 1706 aaKnown RBP-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 LCE6AA0A183 80 aa-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 M0QY20 66 aa-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 M0QZ58 72 aa-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 IGLC2P0DOY2 106 aa-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 IGLC3P0DOY3 106 aa-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 WT1-ASQ06250 92 aa-1.45□□□□□ -2.64
LRCH3-211ENST00000466054 ITSN1Q15811 1721 aa-1.46□□□□□ -2.64
LRCH3-211ENST00000466054 LEPROTL1O95214 131 aa-1.46□□□□□ -2.64
LRCH3-211ENST00000466054 ACYP1P07311 99 aa-1.46□□□□□ -2.64
LRCH3-211ENST00000466054 RGPD1P0DJD0 1748 aa-1.46□□□□□ -2.64
LRCH3-211ENST00000466054 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.47□□□□□ -2.64
LRCH3-211ENST00000466054 LTN1O94822 1766 aa-1.47□□□□□ -2.64
LRCH3-211ENST00000466054 PIK3C2BO00750 1634 aa-1.47□□□□□ -2.64
LRCH3-211ENST00000466054 ZC3H13Q5T200 1668 aaKnown RBP-1.47□□□□□ -2.64
LRCH3-211ENST00000466054 LEAP2Q969E1 77 aa-1.47□□□□□ -2.64
LRCH3-211ENST00000466054 TMEM218A2RU14 115 aa-1.48□□□□□ -2.65
LRCH3-211ENST00000466054 H3BUA1 57 aa-1.48□□□□□ -2.65
LRCH3-211ENST00000466054 BVES-AS1Q5T3Y7 98 aa-1.48□□□□□ -2.65
LRCH3-211ENST00000466054 GAFA1Q96PS6 74 aa-1.48□□□□□ -2.65
LRCH3-211ENST00000466054 DOT1LQ8TEK3 1739 aa-1.49□□□□□ -2.65
LRCH3-211ENST00000466054 ATP10BO94823 1461 aa-1.49□□□□□ -2.65
LRCH3-211ENST00000466054 HMGN3Q15651 99 aa-1.49□□□□□ -2.65
LRCH3-211ENST00000466054 PMCHL2Q9BQD1 86 aa-1.49□□□□□ -2.65
LRCH3-211ENST00000466054 KIF21BO75037 1637 aa-1.49□□□□□ -2.65
LRCH3-211ENST00000466054 PLIN4Q96Q06 1357 aa-1.49□□□□□ -2.65
LRCH3-211ENST00000466054 ATOX1O00244 68 aa-1.5□□□□□ -2.65
LRCH3-211ENST00000466054 ALKAL2Q6UX46 152 aa-1.5□□□□□ -2.65
LRCH3-211ENST00000466054 CFAP47Q6ZTR5 3102 aa-1.5□□□□□ -2.65
LRCH3-211ENST00000466054 CD163L1Q9NR16 1453 aa-1.5□□□□□ -2.65
LRCH3-211ENST00000466054 MAP3K4Q9Y6R4 1608 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 USP34Q70CQ2 3546 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 PPLO60437 1756 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 IQCF6A8MYZ5 107 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 D6R8Y8 96 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 RPS27P42677 84 aaKnown RBP-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 RPS27LQ71UM5 84 aaKnown RBP-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 MUSTN1Q8IVN3 82 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 MYH4Q9Y623 1939 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 CCNB3Q8WWL7 1395 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 NRXN1Q9ULB1 1477 aa-1.51□□□□□ -2.65
LRCH3-211ENST00000466054 A0A1B0GUT8 65 aa-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 MED14O60244 1454 aa-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 DIP2BQ9P265 1576 aa-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 KIF14Q15058 1648 aa-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 NRAPQ86VF7 1730 aa-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 UBR1Q8IWV7 1749 aa-1.52□□□□□ -2.65
LRCH3-211ENST00000466054 UNC80Q8N2C7 3258 aa-1.53□□□□□ -2.65
LRCH3-211ENST00000466054 CROCC2H7BZ55 1655 aa-1.53□□□□□ -2.65
LRCH3-211ENST00000466054 ETDBQ3ZM63 59 aa-1.53□□□□□ -2.65
LRCH3-211ENST00000466054 PREX2Q70Z35 1606 aa-1.53□□□□□ -2.65
LRCH3-211ENST00000466054 ACBD7Q8N6N7 88 aa-1.53□□□□□ -2.65
LRCH3-211ENST00000466054 CEP250Q9BV73 2442 aa-1.53□□□□□ -2.65
LRCH3-211ENST00000466054 TJP1Q07157 1748 aa-1.54□□□□□ -2.66
LRCH3-211ENST00000466054 NCOA2Q15596 1464 aa-1.54□□□□□ -2.66
LRCH3-211ENST00000466054 ZNF720Q7Z2F6 126 aa-1.54□□□□□ -2.66
LRCH3-211ENST00000466054 CLTCQ00610 1675 aaKnown RBP-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 NEXMIFQ5QGS0 1516 aa-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 ASXL1Q8IXJ9 1541 aa-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 CCDC88BA6NC98 1476 aa-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 MRPL33O75394 65 aaKnown RBP-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 CYB5AP00167 134 aa-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 MINOS1Q5TGZ0 78 aa-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 RNF17Q9BXT8 1623 aaKnown RBP-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 INO80Q9ULG1 1556 aaPredicted RBP-1.55□□□□□ -2.66
LRCH3-211ENST00000466054 ARFGEF2Q9Y6D5 1785 aa-1.56□□□□□ -2.66
LRCH3-211ENST00000466054 RICTORQ6R327 1708 aa-1.56□□□□□ -2.66
LRCH3-211ENST00000466054 DEFB131BA0A096LNP1 70 aa-1.56□□□□□ -2.66
LRCH3-211ENST00000466054 TRAV21A0A0B4J279 112 aa-1.56□□□□□ -2.66
LRCH3-211ENST00000466054 PLGLAQ15195 96 aa-1.56□□□□□ -2.66
LRCH3-211ENST00000466054 LOC400499M0QZD8 3231 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 EEA1Q15075 1411 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 DNAH12Q6ZR08 3092 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 NDUFB1O75438 58 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 SFTA3P0C7M3 94 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 FCER1GP30273 86 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 C6orf48Q9UBA6 75 aa-1.57□□□□□ -2.66
LRCH3-211ENST00000466054 NCBP2-AS2Q69YL0 99 aa-1.58□□□□□ -2.66
LRCH3-211ENST00000466054 C20orf78Q9BR46 151 aa-1.58□□□□□ -2.66
LRCH3-211ENST00000466054 MYO5CQ9NQX4 1742 aa-1.58□□□□□ -2.66
LRCH3-211ENST00000466054 VCANP13611 3396 aa-1.58□□□□□ -2.66
LRCH3-211ENST00000466054 FAM208AQ9UK61 1670 aaKnown RBP-1.58□□□□□ -2.66
LRCH3-211ENST00000466054 HFM1A2PYH4 1435 aa-1.58□□□□□ -2.66
LRCH3-211ENST00000466054 EPRSP07814 1512 aaKnown RBP-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 NDUFA4O00483 81 aa-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 LINC00032P0C843 101 aa-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 IFI27P40305 119 aaPredicted RBP-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 S100A10P60903 97 aa-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 FANCAO15360 1455 aa-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 NHSQ6T4R5 1651 aa-1.59□□□□□ -2.66
LRCH3-211ENST00000466054 ASPMQ8IZT6 3477 aa-1.6□□□□□ -2.66
LRCH3-211ENST00000466054 CFAP43Q8NDM7 1665 aa-1.6□□□□□ -2.67
LRCH3-211ENST00000466054 URB2Q14146 1524 aaKnown RBP-1.61□□□□□ -2.67
LRCH3-211ENST00000466054 CLASP1Q7Z460 1538 aa-1.61□□□□□ -2.67
LRCH3-211ENST00000466054 MYO3AQ8NEV4 1616 aa-1.61□□□□□ -2.67
LRCH3-211ENST00000466054 UQCRHLA0A096LP55 91 aa-1.61□□□□□ -2.67
LRCH3-211ENST00000466054 DPY30Q9C005 99 aa-1.61□□□□□ -2.67
LRCH3-211ENST00000466054 ARHGAP35Q9NRY4 1499 aa-1.62□□□□□ -2.67
LRCH3-211ENST00000466054 COL5A1-AS1Q5SY13 56 aa-1.62□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms