RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	CXCL6	P80162	114 aa		5.32	□□□□□ -1.56
TRIM5-208	ENST00000465634	DSCR10	P59022	87 aa		5.31	□□□□□ -1.56
TRIM5-208	ENST00000465634	LINC00313	P59037	77 aa		5.31	□□□□□ -1.56
TRIM5-208	ENST00000465634	PRR15	Q8IV56	129 aa		5.31	□□□□□ -1.56
TRIM5-208	ENST00000465634	CDIP1	Q9H305	208 aa		5.31	□□□□□ -1.56
TRIM5-208	ENST00000465634	HERC1	Q15751	4861 aa		5.31	□□□□□ -1.56
TRIM5-208	ENST00000465634	IGHV6-1	A0A0B4J1U7	121 aa		5.3	□□□□□ -1.56
TRIM5-208	ENST00000465634	IGKV3D-7	A0A0C4DH55	119 aa		5.3	□□□□□ -1.56
TRIM5-208	ENST00000465634	ATP5EP2	Q5VTU8	51 aa		5.3	□□□□□ -1.56
TRIM5-208	ENST00000465634	LINC00643	Q86TS7	51 aa		5.3	□□□□□ -1.56
TRIM5-208	ENST00000465634	C9orf92	A6NGG3	77 aa		5.28	□□□□□ -1.56
TRIM5-208	ENST00000465634		K7EQZ3	153 aa		5.27	□□□□□ -1.57
TRIM5-208	ENST00000465634	XP32	Q5T750	250 aa		5.27	□□□□□ -1.57
TRIM5-208	ENST00000465634	C8orf17	Q9NRJ1	99 aa		5.26	□□□□□ -1.57
TRIM5-208	ENST00000465634	NOTCH2NL	Q7Z3S9	236 aa		5.24	□□□□□ -1.57
TRIM5-208	ENST00000465634	C20orf166-AS1	Q96NR2	134 aa		5.24	□□□□□ -1.57
TRIM5-208	ENST00000465634	KRTAP16-1	A8MUX0	517 aa		5.23	□□□□□ -1.57
TRIM5-208	ENST00000465634		Q75L30	129 aa		5.23	□□□□□ -1.57
TRIM5-208	ENST00000465634		Q8N9L7	120 aa		5.23	□□□□□ -1.57
TRIM5-208	ENST00000465634	MMP24-AS1	A0A0U1RRL7	71 aa		5.22	□□□□□ -1.57
TRIM5-208	ENST00000465634	hDV103S1	A0JD37	113 aa		5.22	□□□□□ -1.57
TRIM5-208	ENST00000465634		A8MUU9	505 aa		5.22	□□□□□ -1.57
TRIM5-208	ENST00000465634	TMEM254	Q8TBM7	123 aa		5.22	□□□□□ -1.57
TRIM5-208	ENST00000465634	SEC61B	P60468	96 aa	Known RBP	5.21	□□□□□ -1.58
TRIM5-208	ENST00000465634	RPL37	P61927	97 aa	Known RBP	5.21	□□□□□ -1.58
TRIM5-208	ENST00000465634		Q8N9P0	234 aa	Predicted RBP	5.21	□□□□□ -1.58
TRIM5-208	ENST00000465634	KRTAP3-3	Q9BYR6	98 aa		5.21	□□□□□ -1.58
TRIM5-208	ENST00000465634	KRTAP3-2	Q9BYR7	98 aa		5.21	□□□□□ -1.58
TRIM5-208	ENST00000465634	HMCN2	Q8NDA2	5059 aa		5.2	□□□□□ -1.58
TRIM5-208	ENST00000465634	HCG22	E2RYF7	251 aa		5.2	□□□□□ -1.58
TRIM5-208	ENST00000465634	CASC2	Q6XLA1	102 aa		5.2	□□□□□ -1.58
TRIM5-208	ENST00000465634	MRPL34	Q9BQ48	92 aa	Known RBP	5.2	□□□□□ -1.58
TRIM5-208	ENST00000465634	HIST1H4A	P62805	103 aa	Known RBP	5.19	□□□□□ -1.58
TRIM5-208	ENST00000465634	IMUP	Q9GZP8	106 aa		5.19	□□□□□ -1.58
TRIM5-208	ENST00000465634	ATP11AUN	Q6ZP68	121 aa		5.18	□□□□□ -1.58
TRIM5-208	ENST00000465634	WFDC13	Q8IUB5	93 aa		5.16	□□□□□ -1.58
TRIM5-208	ENST00000465634	LPA	P08519	4548 aa		5.16	□□□□□ -1.58
TRIM5-208	ENST00000465634	NDUFS5	O43920	106 aa		5.13	□□□□□ -1.59
TRIM5-208	ENST00000465634	MT-ATP8	P03928	68 aa		5.13	□□□□□ -1.59
TRIM5-208	ENST00000465634	PCOTH	Q58A44	107 aa		5.13	□□□□□ -1.59
TRIM5-208	ENST00000465634	TP53AIP1	Q9HCN2	124 aa		5.13	□□□□□ -1.59
TRIM5-208	ENST00000465634	LRP2	P98164	4655 aa		5.13	□□□□□ -1.59
TRIM5-208	ENST00000465634	ZCCHC13	Q8WW36	166 aa	Known RBP	5.12	□□□□□ -1.59
TRIM5-208	ENST00000465634		A0A087WVE0	104 aa		5.11	□□□□□ -1.59
TRIM5-208	ENST00000465634	UQCRQ	O14949	82 aa		5.06	□□□□□ -1.6
TRIM5-208	ENST00000465634	SCGB1A1	P11684	91 aa		5.06	□□□□□ -1.6
TRIM5-208	ENST00000465634		Q5W150	140 aa		5.04	□□□□□ -1.6
TRIM5-208	ENST00000465634	SMIM20	Q8N5G0	67 aa		5.03	□□□□□ -1.6
TRIM5-208	ENST00000465634	OCR1	Q9BZK8	76 aa		5.03	□□□□□ -1.6
TRIM5-208	ENST00000465634	TRAV22	A0A0B4J277	110 aa		5.02	□□□□□ -1.61
TRIM5-208	ENST00000465634	FAM236A	A0A1B0GUQ0	79 aa		5.02	□□□□□ -1.61
TRIM5-208	ENST00000465634	FAM236B	A0A1B0GV22	79 aa		5.02	□□□□□ -1.61
TRIM5-208	ENST00000465634	KRTAP4-1	Q9BYQ7	146 aa		5.02	□□□□□ -1.61
TRIM5-208	ENST00000465634	ATOX1	O00244	68 aa		5.01	□□□□□ -1.61
TRIM5-208	ENST00000465634	SPINK7	P58062	85 aa		5.01	□□□□□ -1.61
TRIM5-208	ENST00000465634	C5orf47	Q569G3	176 aa		5	□□□□□ -1.61
TRIM5-208	ENST00000465634	MUC17	Q685J3	4493 aa		5	□□□□□ -1.61
TRIM5-208	ENST00000465634	C7orf65	Q6ZTY9	151 aa		4.99	□□□□□ -1.61
TRIM5-208	ENST00000465634	UBR4	Q5T4S7	5183 aa		4.99	□□□□□ -1.61
TRIM5-208	ENST00000465634		A0A0U1RQV1	116 aa		4.98	□□□□□ -1.61
TRIM5-208	ENST00000465634	TRAV7	A0A075B6U4	112 aa		4.97	□□□□□ -1.61
TRIM5-208	ENST00000465634	LOC101927531	A0A1B0GV80	90 aa		4.97	□□□□□ -1.61
TRIM5-208	ENST00000465634		H0Y9P7	68 aa		4.97	□□□□□ -1.61
TRIM5-208	ENST00000465634		H3BPC8	53 aa		4.97	□□□□□ -1.61
TRIM5-208	ENST00000465634	IGKV2-30	P06310	120 aa		4.97	□□□□□ -1.61
TRIM5-208	ENST00000465634	MP68	P56378	58 aa		4.97	□□□□□ -1.61
TRIM5-208	ENST00000465634	IGKV2D-30	A0A075B6S6	120 aa		4.96	□□□□□ -1.62
TRIM5-208	ENST00000465634	HRES1	P13985	223 aa		4.94	□□□□□ -1.62
TRIM5-208	ENST00000465634	MPLKIP	Q8TAP9	179 aa		4.94	□□□□□ -1.62
TRIM5-208	ENST00000465634	CYP4F30P	Q9H0H9	118 aa		4.94	□□□□□ -1.62
TRIM5-208	ENST00000465634	RBM12B-AS1	Q9P1G2	102 aa		4.94	□□□□□ -1.62
TRIM5-208	ENST00000465634	C1orf64	Q8NEQ6	169 aa		4.93	□□□□□ -1.62
TRIM5-208	ENST00000465634	SERP2	Q8N6R1	65 aa		4.92	□□□□□ -1.62
TRIM5-208	ENST00000465634	LINC00208	Q96KT6	92 aa		4.92	□□□□□ -1.62
TRIM5-208	ENST00000465634	MUC2	Q02817	5179 aa		4.9	□□□□□ -1.62
TRIM5-208	ENST00000465634	COX6B2	Q6YFQ2	88 aa		4.89	□□□□□ -1.63
TRIM5-208	ENST00000465634	KRTAP19-2	Q3LHN2	52 aa		4.88	□□□□□ -1.63
TRIM5-208	ENST00000465634	FAM236D	A0A1B0GTK5	79 aa		4.87	□□□□□ -1.63
TRIM5-208	ENST00000465634	FAM236C	P0DP71	79 aa		4.87	□□□□□ -1.63
TRIM5-208	ENST00000465634	RNF213	Q63HN8	5207 aa		4.87	□□□□□ -1.63
TRIM5-208	ENST00000465634	COX7C	P15954	63 aa		4.85	□□□□□ -1.63
TRIM5-208	ENST00000465634	C4orf26	Q17RF5	130 aa		4.85	□□□□□ -1.63
TRIM5-208	ENST00000465634	LCE2C	Q5TA81	110 aa		4.85	□□□□□ -1.63
TRIM5-208	ENST00000465634	ANAPC13	Q9BS18	74 aa		4.84	□□□□□ -1.63
TRIM5-208	ENST00000465634	KLKP1	Q107X0	134 aa		4.82	□□□□□ -1.64
TRIM5-208	ENST00000465634	H1FX-AS1	Q4G0G2	97 aa		4.82	□□□□□ -1.64
TRIM5-208	ENST00000465634	C20orf197	Q8N268	126 aa		4.82	□□□□□ -1.64
TRIM5-208	ENST00000465634		A8MUN3	132 aa		4.8	□□□□□ -1.64
TRIM5-208	ENST00000465634	SNURF	Q9Y675	71 aa		4.8	□□□□□ -1.64
TRIM5-208	ENST00000465634	MT1H	P80294	61 aa		4.78	□□□□□ -1.64
TRIM5-208	ENST00000465634	KRTAP3-1	Q9BYR8	98 aa		4.78	□□□□□ -1.64
TRIM5-208	ENST00000465634	NDUFC1	O43677	76 aa		4.77	□□□□□ -1.65
TRIM5-208	ENST00000465634	LCE2A	Q5TA79	106 aa	Predicted RBP	4.77	□□□□□ -1.65
TRIM5-208	ENST00000465634	SPANXA2-OT1	Q8N9U9	137 aa		4.75	□□□□□ -1.65
TRIM5-208	ENST00000465634		M0R2T5	61 aa		4.73	□□□□□ -1.65
TRIM5-208	ENST00000465634	DMAC1	Q96GE9	116 aa		4.73	□□□□□ -1.65
TRIM5-208	ENST00000465634	FAT4	Q6V0I7	4981 aa		4.72	□□□□□ -1.65
TRIM5-208	ENST00000465634		S4R3F8	94 aa		4.71	□□□□□ -1.66
TRIM5-208	ENST00000465634	CCDC179	H3BU77	68 aa		4.7	□□□□□ -1.66
TRIM5-208	ENST00000465634		H7BZZ5	65 aa		4.7	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms