RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 CCKP06307 115 aa10.41□□□□□ -0.74
CSPG5-204ENST00000465441 IGHV6-1A0A0B4J1U7 121 aa10.4□□□□□ -0.74
CSPG5-204ENST00000465441 RBM12B-AS1Q9P1G2 102 aa10.4□□□□□ -0.74
CSPG5-204ENST00000465441 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.39□□□□□ -0.75
CSPG5-204ENST00000465441 NAA38Q9BRA0 125 aaKnown RBP10.37□□□□□ -0.75
CSPG5-204ENST00000465441 ATXN8Q156A1 80 aa10.36□□□□□ -0.75
CSPG5-204ENST00000465441 BAALC-AS2P0C853 105 aa10.35□□□□□ -0.75
CSPG5-204ENST00000465441 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
CSPG5-204ENST00000465441 KRTAP9-7A8MTY7 169 aa10.33□□□□□ -0.76
CSPG5-204ENST00000465441 MT1FP04733 61 aa10.33□□□□□ -0.76
CSPG5-204ENST00000465441 LYRM7Q5U5X0 104 aa10.32□□□□□ -0.76
CSPG5-204ENST00000465441 VPS25Q9BRG1 176 aa10.32□□□□□ -0.76
CSPG5-204ENST00000465441 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
CSPG5-204ENST00000465441 DSCR8Q96T75 97 aa10.31□□□□□ -0.76
CSPG5-204ENST00000465441 A0A1B0GVX0 72 aa10.3□□□□□ -0.76
CSPG5-204ENST00000465441 LCE2BO14633 110 aa10.3□□□□□ -0.76
CSPG5-204ENST00000465441 BATFQ16520 125 aa10.3□□□□□ -0.76
CSPG5-204ENST00000465441 KRTAP9-3Q9BYQ3 159 aa10.29□□□□□ -0.76
CSPG5-204ENST00000465441 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
CSPG5-204ENST00000465441 C9JAW5 83 aa10.25□□□□□ -0.77
CSPG5-204ENST00000465441 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
CSPG5-204ENST00000465441 C21orf62-AS1Q17RA5 79 aa10.24□□□□□ -0.77
CSPG5-204ENST00000465441 FCGBPQ9Y6R7 5405 aaPredicted RBP10.23□□□□□ -0.77
CSPG5-204ENST00000465441 ZCCHC13Q8WW36 166 aaKnown RBP10.23□□□□□ -0.77
CSPG5-204ENST00000465441 C9orf118A6NHY6 69 aa10.22□□□□□ -0.77
CSPG5-204ENST00000465441 KRTAP19-1Q8IUB9 90 aa10.22□□□□□ -0.77
CSPG5-204ENST00000465441 MTURNQ8N3F0 131 aa10.22□□□□□ -0.77
CSPG5-204ENST00000465441 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
CSPG5-204ENST00000465441 SPINK7P58062 85 aa10.21□□□□□ -0.77
CSPG5-204ENST00000465441 J3KT08 172 aa10.2□□□□□ -0.78
CSPG5-204ENST00000465441 TAX1BP3O14907 124 aa10.2□□□□□ -0.78
CSPG5-204ENST00000465441 Q6ZQT0 140 aa10.2□□□□□ -0.78
CSPG5-204ENST00000465441 A0A1B0GW54 56 aa10.17□□□□□ -0.78
CSPG5-204ENST00000465441 PDE6GP18545 87 aa10.17□□□□□ -0.78
CSPG5-204ENST00000465441 A0A1W2PPM0 123 aa10.16□□□□□ -0.78
CSPG5-204ENST00000465441 Q8N9P0 234 aaPredicted RBP10.16□□□□□ -0.78
CSPG5-204ENST00000465441 NDUFB1O75438 58 aa10.13□□□□□ -0.79
CSPG5-204ENST00000465441 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
CSPG5-204ENST00000465441 H3BT86 120 aa10.12□□□□□ -0.79
CSPG5-204ENST00000465441 C8orf17Q9NRJ1 99 aa10.09□□□□□ -0.79
CSPG5-204ENST00000465441 A8MWP4 228 aa10.07□□□□□ -0.8
CSPG5-204ENST00000465441 IGKV3D-7A0A0C4DH55 119 aa10.05□□□□□ -0.8
CSPG5-204ENST00000465441 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
CSPG5-204ENST00000465441 SPCS1Q9Y6A9 102 aa10.03□□□□□ -0.8
CSPG5-204ENST00000465441 COL5A1-AS1Q5SY13 56 aa10.02□□□□□ -0.81
CSPG5-204ENST00000465441 Q6ZVQ6 151 aa10.01□□□□□ -0.81
CSPG5-204ENST00000465441 NREPQ16612 68 aa9.96□□□□□ -0.82
CSPG5-204ENST00000465441 KRTAP19-6Q3LI70 58 aa9.96□□□□□ -0.82
CSPG5-204ENST00000465441 PRR15Q8IV56 129 aa9.96□□□□□ -0.82
CSPG5-204ENST00000465441 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
CSPG5-204ENST00000465441 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
CSPG5-204ENST00000465441 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
CSPG5-204ENST00000465441 MMP24-AS1A0A0U1RRL7 71 aa9.9□□□□□ -0.82
CSPG5-204ENST00000465441 K7EP34 96 aa9.9□□□□□ -0.82
CSPG5-204ENST00000465441 TMEM254Q8TBM7 123 aa9.9□□□□□ -0.82
CSPG5-204ENST00000465441 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
CSPG5-204ENST00000465441 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
CSPG5-204ENST00000465441 MACF1Q9UPN3 7388 aaKnown RBP9.85□□□□□ -0.83
CSPG5-204ENST00000465441 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
CSPG5-204ENST00000465441 K7EQZ3 153 aa9.83□□□□□ -0.84
CSPG5-204ENST00000465441 SYNE2Q8WXH0 6885 aaKnown RBP9.82□□□□□ -0.84
CSPG5-204ENST00000465441 NDUFS5O43920 106 aa9.82□□□□□ -0.84
CSPG5-204ENST00000465441 PCP4L1A6NKN8 68 aa9.81□□□□□ -0.84
CSPG5-204ENST00000465441 BPY2O14599 106 aa9.81□□□□□ -0.84
CSPG5-204ENST00000465441 GTF2H5Q6ZYL4 71 aa9.79□□□□□ -0.84
CSPG5-204ENST00000465441 Q5W150 140 aa9.76□□□□□ -0.85
CSPG5-204ENST00000465441 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
CSPG5-204ENST00000465441 IGKV2-30P06310 120 aa9.75□□□□□ -0.85
CSPG5-204ENST00000465441 F8W1H4 67 aa9.72□□□□□ -0.85
CSPG5-204ENST00000465441 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
CSPG5-204ENST00000465441 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
CSPG5-204ENST00000465441 Q8N9L7 120 aa9.68□□□□□ -0.86
CSPG5-204ENST00000465441 KRTAP6-3Q3LI67 103 aa9.64□□□□□ -0.87
CSPG5-204ENST00000465441 ETDBQ3ZM63 59 aa9.64□□□□□ -0.87
CSPG5-204ENST00000465441 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
CSPG5-204ENST00000465441 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
CSPG5-204ENST00000465441 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
CSPG5-204ENST00000465441 CXCL6P80162 114 aa9.54□□□□□ -0.88
CSPG5-204ENST00000465441 C5orf47Q569G3 176 aa9.53□□□□□ -0.88
CSPG5-204ENST00000465441 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
CSPG5-204ENST00000465441 FAM236AA0A1B0GUQ0 79 aa9.47□□□□□ -0.89
CSPG5-204ENST00000465441 FAM236BA0A1B0GV22 79 aa9.47□□□□□ -0.89
CSPG5-204ENST00000465441 ACYP1P07311 99 aa9.45□□□□□ -0.9
CSPG5-204ENST00000465441 FAM240AA0A1B0GVK7 77 aa9.44□□□□□ -0.9
CSPG5-204ENST00000465441 MT1BP07438 61 aa9.43□□□□□ -0.9
CSPG5-204ENST00000465441 S4R3F8 94 aa9.43□□□□□ -0.9
CSPG5-204ENST00000465441 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
CSPG5-204ENST00000465441 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
CSPG5-204ENST00000465441 A6NN06 94 aa9.41□□□□□ -0.9
CSPG5-204ENST00000465441 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
CSPG5-204ENST00000465441 Q5VV11 94 aa9.38□□□□□ -0.91
CSPG5-204ENST00000465441 LCA10Q71F78 164 aa9.38□□□□□ -0.91
CSPG5-204ENST00000465441 KRTAP19-8Q3LI54 63 aa9.37□□□□□ -0.91
CSPG5-204ENST00000465441 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
CSPG5-204ENST00000465441 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
CSPG5-204ENST00000465441 A0A1B0GV90 55 aa9.32□□□□□ -0.92
CSPG5-204ENST00000465441 MUC12Q9UKN1 5478 aa9.28□□□□□ -0.92
CSPG5-204ENST00000465441 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
CSPG5-204ENST00000465441 KRTAP10-5P60370 271 aa9.26□□□□□ -0.93
CSPG5-204ENST00000465441 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms