RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 C1orf64Q8NEQ6 169 aa11.06□□□□□ -0.64
TSPAN4-210ENST00000464987 IGHV6-1A0A0B4J1U7 121 aa11.05□□□□□ -0.64
TSPAN4-210ENST00000464987 C8orf17Q9NRJ1 99 aa11.05□□□□□ -0.64
TSPAN4-210ENST00000464987 ASB16-AS1Q495Z4 193 aa11.04□□□□□ -0.64
TSPAN4-210ENST00000464987 A0A087X002 238 aa11.04□□□□□ -0.64
TSPAN4-210ENST00000464987 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
TSPAN4-210ENST00000464987 A0A1B0GVX0 72 aa11.02□□□□□ -0.65
TSPAN4-210ENST00000464987 KRTAP10-1P60331 282 aa11□□□□□ -0.65
TSPAN4-210ENST00000464987 CD164Q04900 197 aa11□□□□□ -0.65
TSPAN4-210ENST00000464987 SPINK6Q6UWN8 80 aa10.99□□□□□ -0.65
TSPAN4-210ENST00000464987 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
TSPAN4-210ENST00000464987 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
TSPAN4-210ENST00000464987 H3BPC8 53 aa10.97□□□□□ -0.65
TSPAN4-210ENST00000464987 CDK2AP2O75956 126 aa10.96□□□□□ -0.66
TSPAN4-210ENST00000464987 Q6ZSA8 131 aa10.94□□□□□ -0.66
TSPAN4-210ENST00000464987 PSPHP1O15172 72 aa10.94□□□□□ -0.66
TSPAN4-210ENST00000464987 NDUFS5O43920 106 aa10.94□□□□□ -0.66
TSPAN4-210ENST00000464987 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
TSPAN4-210ENST00000464987 TP53AIP1Q9HCN2 124 aa10.9□□□□□ -0.66
TSPAN4-210ENST00000464987 PKHD1P08F94 4074 aa10.9□□□□□ -0.67
TSPAN4-210ENST00000464987 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
TSPAN4-210ENST00000464987 PCOTHQ58A44 107 aa10.89□□□□□ -0.67
TSPAN4-210ENST00000464987 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
TSPAN4-210ENST00000464987 SPANXA2-OT1Q8N9U9 137 aa10.88□□□□□ -0.67
TSPAN4-210ENST00000464987 SACSQ9NZJ4 4579 aa10.85□□□□□ -0.67
TSPAN4-210ENST00000464987 A8MUN3 132 aa10.85□□□□□ -0.67
TSPAN4-210ENST00000464987 Q5VV11 94 aa10.82□□□□□ -0.68
TSPAN4-210ENST00000464987 KRTAP1-4P0C5Y4 121 aa10.8□□□□□ -0.68
TSPAN4-210ENST00000464987 Q5W150 140 aa10.8□□□□□ -0.68
TSPAN4-210ENST00000464987 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
TSPAN4-210ENST00000464987 KTN1-AS1Q86SY8 53 aa10.78□□□□□ -0.68
TSPAN4-210ENST00000464987 A8MU10 97 aa10.77□□□□□ -0.68
TSPAN4-210ENST00000464987 LIMD2Q9BT23 127 aa10.74□□□□□ -0.69
TSPAN4-210ENST00000464987 KMT2CQ8NEZ4 4911 aaKnown RBP10.73□□□□□ -0.69
TSPAN4-210ENST00000464987 KRTAP13-3Q3SY46 172 aa10.73□□□□□ -0.69
TSPAN4-210ENST00000464987 Q8N9P0 234 aaPredicted RBP10.72□□□□□ -0.69
TSPAN4-210ENST00000464987 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
TSPAN4-210ENST00000464987 COA5Q86WW8 74 aa10.71□□□□□ -0.69
TSPAN4-210ENST00000464987 CHKB-CPT1BH3BT56 60 aa10.7□□□□□ -0.7
TSPAN4-210ENST00000464987 LINC00313P59037 77 aa10.69□□□□□ -0.7
TSPAN4-210ENST00000464987 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
TSPAN4-210ENST00000464987 ATP11AUNQ6ZP68 121 aa10.68□□□□□ -0.7
TSPAN4-210ENST00000464987 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-210ENST00000464987 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-210ENST00000464987 RETNLBQ9BQ08 111 aa10.66□□□□□ -0.7
TSPAN4-210ENST00000464987 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
TSPAN4-210ENST00000464987 Q75L30 129 aa10.64□□□□□ -0.71
TSPAN4-210ENST00000464987 LCA10Q71F78 164 aa10.63□□□□□ -0.71
TSPAN4-210ENST00000464987 PRR15LQ9BU68 103 aa10.62□□□□□ -0.71
TSPAN4-210ENST00000464987 A6NN06 94 aa10.62□□□□□ -0.71
TSPAN4-210ENST00000464987 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
TSPAN4-210ENST00000464987 KRTAP16-1A8MUX0 517 aa10.61□□□□□ -0.71
TSPAN4-210ENST00000464987 RYR3Q15413 4870 aa10.6□□□□□ -0.71
TSPAN4-210ENST00000464987 HRES1P13985 223 aa10.6□□□□□ -0.71
TSPAN4-210ENST00000464987 SPTSSBQ8NFR3 76 aa10.6□□□□□ -0.71
TSPAN4-210ENST00000464987 FAT1Q14517 4588 aa10.59□□□□□ -0.71
TSPAN4-210ENST00000464987 SMR3BP02814 79 aaPredicted RBP10.58□□□□□ -0.72
TSPAN4-210ENST00000464987 RYR2Q92736 4967 aa10.56□□□□□ -0.72
TSPAN4-210ENST00000464987 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
TSPAN4-210ENST00000464987 PRR26Q8N8Z3 221 aa10.56□□□□□ -0.72
TSPAN4-210ENST00000464987 C4orf48Q5BLP8 95 aa10.55□□□□□ -0.72
TSPAN4-210ENST00000464987 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
TSPAN4-210ENST00000464987 A6NED7 52 aa10.54□□□□□ -0.72
TSPAN4-210ENST00000464987 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
TSPAN4-210ENST00000464987 SPINK1P00995 79 aa10.5□□□□□ -0.73
TSPAN4-210ENST00000464987 SPAG11AQ6PDA7 123 aa10.5□□□□□ -0.73
TSPAN4-210ENST00000464987 C7orf65Q6ZTY9 151 aa10.5□□□□□ -0.73
TSPAN4-210ENST00000464987 A0A1B0GVY2 172 aa10.49□□□□□ -0.73
TSPAN4-210ENST00000464987 IGKV2-30P06310 120 aa10.47□□□□□ -0.73
TSPAN4-210ENST00000464987 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
TSPAN4-210ENST00000464987 PKHD1L1Q86WI1 4243 aa10.45□□□□□ -0.74
TSPAN4-210ENST00000464987 LINC01558Q9Y6Z2 57 aa10.43□□□□□ -0.74
TSPAN4-210ENST00000464987 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
TSPAN4-210ENST00000464987 IGKV2D-30A0A075B6S6 120 aa10.39□□□□□ -0.75
TSPAN4-210ENST00000464987 ACYP2P14621 99 aa10.39□□□□□ -0.75
TSPAN4-210ENST00000464987 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
TSPAN4-210ENST00000464987 RPS29P62273 56 aaKnown RBP10.34□□□□□ -0.75
TSPAN4-210ENST00000464987 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
TSPAN4-210ENST00000464987 SPINK7P58062 85 aa10.28□□□□□ -0.76
TSPAN4-210ENST00000464987 EPPK1P58107 5090 aaKnown RBP10.24□□□□□ -0.77
TSPAN4-210ENST00000464987 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
TSPAN4-210ENST00000464987 TNXBP22105 4242 aa10.17□□□□□ -0.78
TSPAN4-210ENST00000464987 FLG2Q5D862 2391 aaPredicted RBP10.17□□□□□ -0.78
TSPAN4-210ENST00000464987 Q8N1X5 172 aa10.16□□□□□ -0.78
TSPAN4-210ENST00000464987 HSPG2P98160 4391 aa10.16□□□□□ -0.78
TSPAN4-210ENST00000464987 A8MUU9 505 aa10.14□□□□□ -0.79
TSPAN4-210ENST00000464987 C20orf166-AS1Q96NR2 134 aa10.14□□□□□ -0.79
TSPAN4-210ENST00000464987 BIRC6Q9NR09 4857 aa10.13□□□□□ -0.79
TSPAN4-210ENST00000464987 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
TSPAN4-210ENST00000464987 PRAC1Q96KF2 57 aa10.1□□□□□ -0.79
TSPAN4-210ENST00000464987 LINC01554Q52M75 96 aa10.09□□□□□ -0.79
TSPAN4-210ENST00000464987 A0A1B0GU69 56 aa10.07□□□□□ -0.8
TSPAN4-210ENST00000464987 ADM2Q7Z4H4 148 aa10.02□□□□□ -0.81
TSPAN4-210ENST00000464987 Q5VSD8 79 aa10□□□□□ -0.81
TSPAN4-210ENST00000464987 KRTAP17-1Q9BYP8 105 aa10□□□□□ -0.81
TSPAN4-210ENST00000464987 RYR1P21817 5038 aa9.99□□□□□ -0.81
TSPAN4-210ENST00000464987 H3BS24 57 aa9.99□□□□□ -0.81
TSPAN4-210ENST00000464987 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
TSPAN4-210ENST00000464987 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
TSPAN4-210ENST00000464987 SPATA8Q6RVD6 105 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms