RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 A8MWP4 228 aa3.48□□□□□ -1.85
SF3B1-206ENST00000462613 BPY2O14599 106 aa3.48□□□□□ -1.85
SF3B1-206ENST00000462613 ATP11AUNQ6ZP68 121 aa3.48□□□□□ -1.85
SF3B1-206ENST00000462613 A0A1B0GV90 55 aa3.47□□□□□ -1.85
SF3B1-206ENST00000462613 DSCR10P59022 87 aa3.47□□□□□ -1.85
SF3B1-206ENST00000462613 RPL37P61927 97 aaKnown RBP3.47□□□□□ -1.85
SF3B1-206ENST00000462613 Q6ZVQ6 151 aa3.47□□□□□ -1.85
SF3B1-206ENST00000462613 Q75L30 129 aa3.47□□□□□ -1.85
SF3B1-206ENST00000462613 ACYP1P07311 99 aa3.46□□□□□ -1.86
SF3B1-206ENST00000462613 J3QR89 54 aa3.45□□□□□ -1.86
SF3B1-206ENST00000462613 LRP2P98164 4655 aa3.45□□□□□ -1.86
SF3B1-206ENST00000462613 FAM240AA0A1B0GVK7 77 aa3.44□□□□□ -1.86
SF3B1-206ENST00000462613 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
SF3B1-206ENST00000462613 PRR15Q8IV56 129 aa3.44□□□□□ -1.86
SF3B1-206ENST00000462613 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
SF3B1-206ENST00000462613 LINC00846Q9NV44 126 aa3.44□□□□□ -1.86
SF3B1-206ENST00000462613 LPAP08519 4548 aa3.44□□□□□ -1.86
SF3B1-206ENST00000462613 IGKV3D-7A0A0C4DH55 119 aa3.43□□□□□ -1.86
SF3B1-206ENST00000462613 A8MUU9 505 aa3.43□□□□□ -1.86
SF3B1-206ENST00000462613 C8orf17Q9NRJ1 99 aa3.43□□□□□ -1.86
SF3B1-206ENST00000462613 hDV103S1A0JD37 113 aa3.41□□□□□ -1.86
SF3B1-206ENST00000462613 K7EQZ3 153 aa3.41□□□□□ -1.86
SF3B1-206ENST00000462613 CXCL6P80162 114 aa3.41□□□□□ -1.86
SF3B1-206ENST00000462613 ATP5EP2Q5VTU8 51 aa3.41□□□□□ -1.86
SF3B1-206ENST00000462613 TMEM254Q8TBM7 123 aa3.41□□□□□ -1.86
SF3B1-206ENST00000462613 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
SF3B1-206ENST00000462613 NDUFS5O43920 106 aa3.4□□□□□ -1.87
SF3B1-206ENST00000462613 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
SF3B1-206ENST00000462613 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
SF3B1-206ENST00000462613 MMP24-AS1A0A0U1RRL7 71 aa3.39□□□□□ -1.87
SF3B1-206ENST00000462613 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
SF3B1-206ENST00000462613 WFDC13Q8IUB5 93 aa3.39□□□□□ -1.87
SF3B1-206ENST00000462613 HCG22E2RYF7 251 aa3.38□□□□□ -1.87
SF3B1-206ENST00000462613 Q8N9P0 234 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-206ENST00000462613 Q8N9L7 120 aa3.37□□□□□ -1.87
SF3B1-206ENST00000462613 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
SF3B1-206ENST00000462613 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
SF3B1-206ENST00000462613 COX6B2Q6YFQ2 88 aa3.36□□□□□ -1.87
SF3B1-206ENST00000462613 LINC00643Q86TS7 51 aa3.36□□□□□ -1.87
SF3B1-206ENST00000462613 K7ERU9 68 aa3.35□□□□□ -1.87
SF3B1-206ENST00000462613 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
SF3B1-206ENST00000462613 KRTAP4-1Q9BYQ7 146 aa3.33□□□□□ -1.88
SF3B1-206ENST00000462613 TP53AIP1Q9HCN2 124 aa3.33□□□□□ -1.88
SF3B1-206ENST00000462613 FAM236DA0A1B0GTK5 79 aa3.32□□□□□ -1.88
SF3B1-206ENST00000462613 FAM236CP0DP71 79 aa3.32□□□□□ -1.88
SF3B1-206ENST00000462613 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
SF3B1-206ENST00000462613 SPINK7P58062 85 aa3.31□□□□□ -1.88
SF3B1-206ENST00000462613 C7orf65Q6ZTY9 151 aa3.3□□□□□ -1.88
SF3B1-206ENST00000462613 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
SF3B1-206ENST00000462613 IGKV2D-30A0A075B6S6 120 aa3.29□□□□□ -1.88
SF3B1-206ENST00000462613 IGKV2-30P06310 120 aa3.29□□□□□ -1.88
SF3B1-206ENST00000462613 TRAV22A0A0B4J277 110 aa3.27□□□□□ -1.89
SF3B1-206ENST00000462613 M0R2T5 61 aa3.27□□□□□ -1.89
SF3B1-206ENST00000462613 SCGB1A1P11684 91 aa3.27□□□□□ -1.89
SF3B1-206ENST00000462613 A0A087WVE0 104 aa3.26□□□□□ -1.89
SF3B1-206ENST00000462613 ATOX1O00244 68 aa3.26□□□□□ -1.89
SF3B1-206ENST00000462613 UQCRQO14949 82 aa3.26□□□□□ -1.89
SF3B1-206ENST00000462613 Q5W150 140 aa3.26□□□□□ -1.89
SF3B1-206ENST00000462613 IMUPQ9GZP8 106 aa3.26□□□□□ -1.89
SF3B1-206ENST00000462613 MUC2Q02817 5179 aa3.25□□□□□ -1.89
SF3B1-206ENST00000462613 HRES1P13985 223 aa3.25□□□□□ -1.89
SF3B1-206ENST00000462613 MP68P56378 58 aa3.24□□□□□ -1.89
SF3B1-206ENST00000462613 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
SF3B1-206ENST00000462613 H0Y9P7 68 aa3.23□□□□□ -1.89
SF3B1-206ENST00000462613 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-206ENST00000462613 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
SF3B1-206ENST00000462613 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
SF3B1-206ENST00000462613 MPLKIPQ8TAP9 179 aa3.22□□□□□ -1.89
SF3B1-206ENST00000462613 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
SF3B1-206ENST00000462613 MT1HP80294 61 aa3.21□□□□□ -1.9
SF3B1-206ENST00000462613 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
SF3B1-206ENST00000462613 SMIM20Q8N5G0 67 aa3.21□□□□□ -1.9
SF3B1-206ENST00000462613 FAM236AA0A1B0GUQ0 79 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 FAM236BA0A1B0GV22 79 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 H3BPC8 53 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 C1orf64Q8NEQ6 169 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 OCR1Q9BZK8 76 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
SF3B1-206ENST00000462613 H1FX-AS1Q4G0G2 97 aa3.18□□□□□ -1.9
SF3B1-206ENST00000462613 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
SF3B1-206ENST00000462613 TRAV7A0A075B6U4 112 aa3.16□□□□□ -1.9
SF3B1-206ENST00000462613 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-206ENST00000462613 A8MUN3 132 aa3.13□□□□□ -1.91
SF3B1-206ENST00000462613 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
SF3B1-206ENST00000462613 S4R3F8 94 aa3.13□□□□□ -1.91
SF3B1-206ENST00000462613 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
SF3B1-206ENST00000462613 LORP23490 312 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-206ENST00000462613 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
SF3B1-206ENST00000462613 KLKP1Q107X0 134 aa3.09□□□□□ -1.91
SF3B1-206ENST00000462613 CSAG1Q6PB30 78 aa3.09□□□□□ -1.91
SF3B1-206ENST00000462613 NDUFC1O43677 76 aa3.08□□□□□ -1.92
SF3B1-206ENST00000462613 FLGP20930 4061 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-206ENST00000462613 LCA10Q71F78 164 aa3.07□□□□□ -1.92
SF3B1-206ENST00000462613 C20orf197Q8N268 126 aa3.07□□□□□ -1.92
SF3B1-206ENST00000462613 KRTAP3-1Q9BYR8 98 aa3.07□□□□□ -1.92
SF3B1-206ENST00000462613 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
SF3B1-206ENST00000462613 SNURFQ9Y675 71 aa3.06□□□□□ -1.92
SF3B1-206ENST00000462613 ACYP2P14621 99 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms