RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 A8MU10 97 aa2.09□□□□□ -2.07
COL8A1-204ENST00000462604 ACYP2P14621 99 aa2.09□□□□□ -2.07
COL8A1-204ENST00000462604 SPINK6Q6UWN8 80 aa2.09□□□□□ -2.07
COL8A1-204ENST00000462604 LCA10Q71F78 164 aa2.09□□□□□ -2.07
COL8A1-204ENST00000462604 ANAPC11Q9NYG5 84 aa2.09□□□□□ -2.07
COL8A1-204ENST00000462604 TEP1Q99973 2627 aaKnown RBP2.09□□□□□ -2.08
COL8A1-204ENST00000462604 HELZ2Q9BYK8 2649 aaKnown RBP2.09□□□□□ -2.08
COL8A1-204ENST00000462604 DNAH9Q9NYC9 4486 aa2.09□□□□□ -2.08
COL8A1-204ENST00000462604 IGLV7-43P04211 117 aa2.08□□□□□ -2.08
COL8A1-204ENST00000462604 C7orf65Q6ZTY9 151 aa2.08□□□□□ -2.08
COL8A1-204ENST00000462604 SSBP3-AS1Q7Z2R9 100 aa2.08□□□□□ -2.08
COL8A1-204ENST00000462604 CIRBP-AS1Q8TBR5 109 aa2.08□□□□□ -2.08
COL8A1-204ENST00000462604 LYSTQ99698 3801 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 A0A087X002 238 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 SPINK7P58062 85 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 KRTAP13-3Q3SY46 172 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 NOTCH2NLQ7Z3S9 236 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 DMAC1Q96GE9 116 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 VPS13DQ5THJ4 4388 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
COL8A1-204ENST00000462604 LINC00313P59037 77 aa2.06□□□□□ -2.08
COL8A1-204ENST00000462604 C1orf134Q5TEV5 83 aa2.06□□□□□ -2.08
COL8A1-204ENST00000462604 Q5W150 140 aa2.06□□□□□ -2.08
COL8A1-204ENST00000462604 RBM12B-AS1Q9P1G2 102 aa2.06□□□□□ -2.08
COL8A1-204ENST00000462604 PLECQ15149 4684 aaKnown RBP2.06□□□□□ -2.08
COL8A1-204ENST00000462604 MAST4O15021 2626 aa2.05□□□□□ -2.08
COL8A1-204ENST00000462604 DNAH17Q9UFH2 4485 aa2.05□□□□□ -2.08
COL8A1-204ENST00000462604 A0A1B0GU69 56 aa2.05□□□□□ -2.08
COL8A1-204ENST00000462604 IGKV2-30P06310 120 aa2.05□□□□□ -2.08
COL8A1-204ENST00000462604 HECTD4Q9Y4D8 3996 aa2.05□□□□□ -2.08
COL8A1-204ENST00000462604 DNAH7Q8WXX0 4024 aa2.05□□□□□ -2.08
COL8A1-204ENST00000462604 DNAH8Q96JB1 4490 aa2.04□□□□□ -2.08
COL8A1-204ENST00000462604 BAHCC1Q9P281 2608 aa2.04□□□□□ -2.08
COL8A1-204ENST00000462604 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
COL8A1-204ENST00000462604 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
COL8A1-204ENST00000462604 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
COL8A1-204ENST00000462604 RETNLBQ9BQ08 111 aa2.03□□□□□ -2.08
COL8A1-204ENST00000462604 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
COL8A1-204ENST00000462604 FLNBO75369 2602 aaKnown RBP2.03□□□□□ -2.09
COL8A1-204ENST00000462604 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
COL8A1-204ENST00000462604 IGKV2D-30A0A075B6S6 120 aa2.02□□□□□ -2.09
COL8A1-204ENST00000462604 UQCR11O14957 56 aa2.02□□□□□ -2.09
COL8A1-204ENST00000462604 LY6G6CO95867 125 aa2.02□□□□□ -2.09
COL8A1-204ENST00000462604 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
COL8A1-204ENST00000462604 PKD1L1Q8TDX9 2849 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 KRTAP16-1A8MUX0 517 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 KRTAP13-2Q52LG2 175 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 F8P00451 2351 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
COL8A1-204ENST00000462604 NOTCH1P46531 2555 aa2□□□□□ -2.09
COL8A1-204ENST00000462604 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
COL8A1-204ENST00000462604 STAB1Q9NY15 2570 aa2□□□□□ -2.09
COL8A1-204ENST00000462604 NBEAL1Q6ZS30 2694 aa1.99□□□□□ -2.09
COL8A1-204ENST00000462604 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
COL8A1-204ENST00000462604 KRTAP10-2P60368 255 aa1.99□□□□□ -2.09
COL8A1-204ENST00000462604 Q6ZSA8 131 aa1.99□□□□□ -2.09
COL8A1-204ENST00000462604 TYMSOSQ8TAI1 123 aa1.99□□□□□ -2.09
COL8A1-204ENST00000462604 SPINK1P00995 79 aa1.98□□□□□ -2.09
COL8A1-204ENST00000462604 PRAC1Q96KF2 57 aa1.98□□□□□ -2.09
COL8A1-204ENST00000462604 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
COL8A1-204ENST00000462604 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
COL8A1-204ENST00000462604 KRTAP10-1P60331 282 aa1.97□□□□□ -2.09
COL8A1-204ENST00000462604 RPS29P62273 56 aaKnown RBP1.97□□□□□ -2.09
COL8A1-204ENST00000462604 MGAM2Q2M2H8 2515 aa1.97□□□□□ -2.09
COL8A1-204ENST00000462604 CSMD3Q7Z407 3707 aa1.96□□□□□ -2.09
COL8A1-204ENST00000462604 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
COL8A1-204ENST00000462604 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
COL8A1-204ENST00000462604 Q8N1X5 172 aa1.96□□□□□ -2.1
COL8A1-204ENST00000462604 LINC00304Q8N9R0 145 aa1.96□□□□□ -2.1
COL8A1-204ENST00000462604 COL6A5A8TX70 2615 aa1.95□□□□□ -2.1
COL8A1-204ENST00000462604 ADM2Q7Z4H4 148 aa1.95□□□□□ -2.1
COL8A1-204ENST00000462604 SACSQ9NZJ4 4579 aa1.95□□□□□ -2.1
COL8A1-204ENST00000462604 KMT2AQ03164 3969 aa1.94□□□□□ -2.1
COL8A1-204ENST00000462604 FAT2Q9NYQ8 4349 aa1.94□□□□□ -2.1
COL8A1-204ENST00000462604 LRP1BQ9NZR2 4599 aa1.93□□□□□ -2.1
COL8A1-204ENST00000462604 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
COL8A1-204ENST00000462604 A0A1B0GU33 70 aa1.92□□□□□ -2.1
COL8A1-204ENST00000462604 A8MUU9 505 aa1.92□□□□□ -2.1
COL8A1-204ENST00000462604 K7ERS5 55 aa1.92□□□□□ -2.1
COL8A1-204ENST00000462604 H1FX-AS1Q4G0G2 97 aa1.92□□□□□ -2.1
COL8A1-204ENST00000462604 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
COL8A1-204ENST00000462604 PKHD1L1Q86WI1 4243 aa1.91□□□□□ -2.1
COL8A1-204ENST00000462604 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
COL8A1-204ENST00000462604 TENM2Q9NT68 2774 aa1.9□□□□□ -2.1
COL8A1-204ENST00000462604 PKD1P98161 4303 aa1.9□□□□□ -2.11
COL8A1-204ENST00000462604 COL7A1Q02388 2944 aa1.9□□□□□ -2.11
COL8A1-204ENST00000462604 MEGF8Q7Z7M0 2845 aa1.9□□□□□ -2.11
COL8A1-204ENST00000462604 H0YAA0 97 aa1.9□□□□□ -2.11
COL8A1-204ENST00000462604 VPS13BQ7Z7G8 4022 aa1.9□□□□□ -2.11
COL8A1-204ENST00000462604 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
COL8A1-204ENST00000462604 COX6B2Q6YFQ2 88 aa1.89□□□□□ -2.11
COL8A1-204ENST00000462604 KRTAP3-1Q9BYR8 98 aa1.89□□□□□ -2.11
COL8A1-204ENST00000462604 DYNC1H1Q14204 4646 aaKnown RBP1.89□□□□□ -2.11
COL8A1-204ENST00000462604 DNHD1Q96M86 4753 aa1.88□□□□□ -2.11
COL8A1-204ENST00000462604 FBN3Q75N90 2809 aa1.88□□□□□ -2.11
COL8A1-204ENST00000462604 SMR3BP02814 79 aaPredicted RBP1.87□□□□□ -2.11
COL8A1-204ENST00000462604 APOBP04114 4563 aaKnown RBP1.87□□□□□ -2.11
COL8A1-204ENST00000462604 ROMO1P60602 79 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms