RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 NDUFB1O75438 58 aa8.66□□□□□ -1.02
TMEM39A-203ENST00000461654 HIST1H4AP62805 103 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-203ENST00000461654 Q96NJ1 140 aa8.65□□□□□ -1.02
TMEM39A-203ENST00000461654 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
TMEM39A-203ENST00000461654 IMUPQ9GZP8 106 aa8.64□□□□□ -1.03
TMEM39A-203ENST00000461654 A8MWP4 228 aa8.63□□□□□ -1.03
TMEM39A-203ENST00000461654 DSCR10P59022 87 aa8.63□□□□□ -1.03
TMEM39A-203ENST00000461654 Q8N9L7 120 aa8.59□□□□□ -1.03
TMEM39A-203ENST00000461654 K7EQZ3 153 aa8.58□□□□□ -1.04
TMEM39A-203ENST00000461654 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
TMEM39A-203ENST00000461654 A0A1B0GVX0 72 aa8.56□□□□□ -1.04
TMEM39A-203ENST00000461654 IGHV6-1A0A0B4J1U7 121 aa8.55□□□□□ -1.04
TMEM39A-203ENST00000461654 A0A087WVE0 104 aa8.53□□□□□ -1.04
TMEM39A-203ENST00000461654 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
TMEM39A-203ENST00000461654 RNF213Q63HN8 5207 aa8.52□□□□□ -1.05
TMEM39A-203ENST00000461654 PRR4Q16378 134 aa8.52□□□□□ -1.05
TMEM39A-203ENST00000461654 LPAP08519 4548 aa8.52□□□□□ -1.05
TMEM39A-203ENST00000461654 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
TMEM39A-203ENST00000461654 FP248Q71RG6 208 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-203ENST00000461654 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
TMEM39A-203ENST00000461654 C8orf17Q9NRJ1 99 aa8.49□□□□□ -1.05
TMEM39A-203ENST00000461654 LINC00313P59037 77 aa8.48□□□□□ -1.05
TMEM39A-203ENST00000461654 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
TMEM39A-203ENST00000461654 FAM236AA0A1B0GUQ0 79 aa8.47□□□□□ -1.05
TMEM39A-203ENST00000461654 FAM236BA0A1B0GV22 79 aa8.47□□□□□ -1.05
TMEM39A-203ENST00000461654 SCGB1A1P11684 91 aa8.47□□□□□ -1.05
TMEM39A-203ENST00000461654 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
TMEM39A-203ENST00000461654 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
TMEM39A-203ENST00000461654 hDV103S1A0JD37 113 aa8.45□□□□□ -1.06
TMEM39A-203ENST00000461654 IGLV7-46A0A075B6I9 117 aa8.44□□□□□ -1.06
TMEM39A-203ENST00000461654 TMEM254Q8TBM7 123 aa8.42□□□□□ -1.06
TMEM39A-203ENST00000461654 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.06
TMEM39A-203ENST00000461654 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-203ENST00000461654 ATOX1O00244 68 aa8.39□□□□□ -1.07
TMEM39A-203ENST00000461654 C9orf92A6NGG3 77 aa8.38□□□□□ -1.07
TMEM39A-203ENST00000461654 SMIM20Q8N5G0 67 aa8.37□□□□□ -1.07
TMEM39A-203ENST00000461654 NDUFS5O43920 106 aa8.36□□□□□ -1.07
TMEM39A-203ENST00000461654 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
TMEM39A-203ENST00000461654 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
TMEM39A-203ENST00000461654 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
TMEM39A-203ENST00000461654 ANAPC13Q9BS18 74 aa8.31□□□□□ -1.08
TMEM39A-203ENST00000461654 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
TMEM39A-203ENST00000461654 Q8N9P0 234 aaPredicted RBP8.3□□□□□ -1.08
TMEM39A-203ENST00000461654 TRAV7A0A075B6U4 112 aa8.29□□□□□ -1.08
TMEM39A-203ENST00000461654 UQCRQO14949 82 aa8.28□□□□□ -1.08
TMEM39A-203ENST00000461654 OCR1Q9BZK8 76 aa8.28□□□□□ -1.08
TMEM39A-203ENST00000461654 MUC2Q02817 5179 aa8.26□□□□□ -1.09
TMEM39A-203ENST00000461654 SERP2Q8N6R1 65 aa8.26□□□□□ -1.09
TMEM39A-203ENST00000461654 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
TMEM39A-203ENST00000461654 C20orf166-AS1Q96NR2 134 aa8.25□□□□□ -1.09
TMEM39A-203ENST00000461654 A8MUU9 505 aa8.24□□□□□ -1.09
TMEM39A-203ENST00000461654 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
TMEM39A-203ENST00000461654 XP32Q5T750 250 aa8.22□□□□□ -1.09
TMEM39A-203ENST00000461654 Q75L30 129 aa8.22□□□□□ -1.09
TMEM39A-203ENST00000461654 MP68P56378 58 aa8.21□□□□□ -1.1
TMEM39A-203ENST00000461654 COX7CP15954 63 aa8.2□□□□□ -1.1
TMEM39A-203ENST00000461654 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
TMEM39A-203ENST00000461654 H0Y9P7 68 aa8.18□□□□□ -1.1
TMEM39A-203ENST00000461654 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-203ENST00000461654 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
TMEM39A-203ENST00000461654 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-203ENST00000461654 MUC17Q685J3 4493 aa8.15□□□□□ -1.11
TMEM39A-203ENST00000461654 H3BPC8 53 aa8.14□□□□□ -1.11
TMEM39A-203ENST00000461654 PCP4P48539 62 aa8.13□□□□□ -1.11
TMEM39A-203ENST00000461654 Q5W150 140 aa8.13□□□□□ -1.11
TMEM39A-203ENST00000461654 LCE2AQ5TA79 106 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-203ENST00000461654 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
TMEM39A-203ENST00000461654 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
TMEM39A-203ENST00000461654 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
TMEM39A-203ENST00000461654 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
TMEM39A-203ENST00000461654 LOC101927531A0A1B0GV80 90 aa8.08□□□□□ -1.12
TMEM39A-203ENST00000461654 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-203ENST00000461654 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
TMEM39A-203ENST00000461654 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
TMEM39A-203ENST00000461654 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
TMEM39A-203ENST00000461654 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
TMEM39A-203ENST00000461654 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
TMEM39A-203ENST00000461654 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
TMEM39A-203ENST00000461654 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
TMEM39A-203ENST00000461654 NDUFC1O43677 76 aa8□□□□□ -1.13
TMEM39A-203ENST00000461654 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
TMEM39A-203ENST00000461654 CYP4F30PQ9H0H9 118 aa7.99□□□□□ -1.13
TMEM39A-203ENST00000461654 SPINK7P58062 85 aa7.97□□□□□ -1.13
TMEM39A-203ENST00000461654 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
TMEM39A-203ENST00000461654 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
TMEM39A-203ENST00000461654 H7BZZ5 65 aa7.88□□□□□ -1.15
TMEM39A-203ENST00000461654 HRES1P13985 223 aa7.86□□□□□ -1.15
TMEM39A-203ENST00000461654 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
TMEM39A-203ENST00000461654 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
TMEM39A-203ENST00000461654 TMEM258P61165 79 aa7.83□□□□□ -1.16
TMEM39A-203ENST00000461654 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
TMEM39A-203ENST00000461654 C4orf26Q17RF5 130 aa7.8□□□□□ -1.16
TMEM39A-203ENST00000461654 ATP5EP56381 51 aaPredicted RBP7.79□□□□□ -1.16
TMEM39A-203ENST00000461654 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
TMEM39A-203ENST00000461654 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
TMEM39A-203ENST00000461654 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
TMEM39A-203ENST00000461654 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
TMEM39A-203ENST00000461654 A8MUN3 132 aa7.74□□□□□ -1.17
TMEM39A-203ENST00000461654 MT1HP80294 61 aa7.73□□□□□ -1.17
TMEM39A-203ENST00000461654 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms