RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 A0A1B0GVX0 72 aa10.74□□□□□ -0.69
SCAF8-204ENST00000461219 C8orf87E5RJ46 101 aa10.74□□□□□ -0.69
SCAF8-204ENST00000461219 NDUFB1O75438 58 aa10.74□□□□□ -0.69
SCAF8-204ENST00000461219 H3BT86 120 aa10.73□□□□□ -0.69
SCAF8-204ENST00000461219 MTURNQ8N3F0 131 aa10.72□□□□□ -0.69
SCAF8-204ENST00000461219 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
SCAF8-204ENST00000461219 NOTCH2NLQ7Z3S9 236 aa10.7□□□□□ -0.7
SCAF8-204ENST00000461219 KRTAP19-2Q3LHN2 52 aa10.69□□□□□ -0.7
SCAF8-204ENST00000461219 SPCS1Q9Y6A9 102 aa10.69□□□□□ -0.7
SCAF8-204ENST00000461219 KRTAP16-1A8MUX0 517 aa10.68□□□□□ -0.7
SCAF8-204ENST00000461219 NREPQ16612 68 aa10.67□□□□□ -0.7
SCAF8-204ENST00000461219 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
SCAF8-204ENST00000461219 M0R2T5 61 aa10.66□□□□□ -0.7
SCAF8-204ENST00000461219 MT1HP80294 61 aa10.64□□□□□ -0.71
SCAF8-204ENST00000461219 A8MWP4 228 aa10.62□□□□□ -0.71
SCAF8-204ENST00000461219 KRTAP9-2Q9BYQ4 174 aa10.58□□□□□ -0.72
SCAF8-204ENST00000461219 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
SCAF8-204ENST00000461219 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
SCAF8-204ENST00000461219 IGKV3D-7A0A0C4DH55 119 aa10.54□□□□□ -0.72
SCAF8-204ENST00000461219 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
SCAF8-204ENST00000461219 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
SCAF8-204ENST00000461219 PRR15Q8IV56 129 aa10.51□□□□□ -0.73
SCAF8-204ENST00000461219 K7EP34 96 aa10.5□□□□□ -0.73
SCAF8-204ENST00000461219 ZCCHC13Q8WW36 166 aaKnown RBP10.5□□□□□ -0.73
SCAF8-204ENST00000461219 BPY2O14599 106 aa10.49□□□□□ -0.73
SCAF8-204ENST00000461219 Q6ZVQ6 151 aa10.49□□□□□ -0.73
SCAF8-204ENST00000461219 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
SCAF8-204ENST00000461219 GTF2H5Q6ZYL4 71 aa10.47□□□□□ -0.73
SCAF8-204ENST00000461219 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
SCAF8-204ENST00000461219 Q8N9P0 234 aaPredicted RBP10.46□□□□□ -0.73
SCAF8-204ENST00000461219 K7EQZ3 153 aa10.43□□□□□ -0.74
SCAF8-204ENST00000461219 KRTAP10-6P60371 365 aaPredicted RBP10.43□□□□□ -0.74
SCAF8-204ENST00000461219 NDUFS5O43920 106 aa10.42□□□□□ -0.74
SCAF8-204ENST00000461219 TMEM254Q8TBM7 123 aa10.42□□□□□ -0.74
SCAF8-204ENST00000461219 MRPL34Q9BQ48 92 aaKnown RBP10.41□□□□□ -0.74
SCAF8-204ENST00000461219 MMP24-AS1A0A0U1RRL7 71 aa10.4□□□□□ -0.74
SCAF8-204ENST00000461219 hDV103S1A0JD37 113 aa10.4□□□□□ -0.74
SCAF8-204ENST00000461219 PRO0461Q9UI25 63 aa10.4□□□□□ -0.74
SCAF8-204ENST00000461219 UBL5Q9BZL1 73 aa10.38□□□□□ -0.75
SCAF8-204ENST00000461219 FLGP20930 4061 aaPredicted RBP10.37□□□□□ -0.75
SCAF8-204ENST00000461219 HRES1P13985 223 aa10.37□□□□□ -0.75
SCAF8-204ENST00000461219 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
SCAF8-204ENST00000461219 SPINK7P58062 85 aa10.37□□□□□ -0.75
SCAF8-204ENST00000461219 LCE2DQ5TA82 110 aaPredicted RBP10.34□□□□□ -0.75
SCAF8-204ENST00000461219 F8W1H4 67 aa10.33□□□□□ -0.76
SCAF8-204ENST00000461219 WFDC13Q8IUB5 93 aa10.32□□□□□ -0.76
SCAF8-204ENST00000461219 Q8N9L7 120 aa10.31□□□□□ -0.76
SCAF8-204ENST00000461219 LINC00846Q9NV44 126 aa10.3□□□□□ -0.76
SCAF8-204ENST00000461219 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
SCAF8-204ENST00000461219 MPLKIPQ8TAP9 179 aa10.28□□□□□ -0.76
SCAF8-204ENST00000461219 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
SCAF8-204ENST00000461219 HCG22E2RYF7 251 aa10.22□□□□□ -0.77
SCAF8-204ENST00000461219 KRTAP9-6A0A140TA67 174 aa10.19□□□□□ -0.78
SCAF8-204ENST00000461219 IGKV2D-30A0A075B6S6 120 aa10.18□□□□□ -0.78
SCAF8-204ENST00000461219 IGKV2-30P06310 120 aa10.18□□□□□ -0.78
SCAF8-204ENST00000461219 CXCL6P80162 114 aa10.14□□□□□ -0.79
SCAF8-204ENST00000461219 C7orf65Q6ZTY9 151 aa10.14□□□□□ -0.79
SCAF8-204ENST00000461219 Q5W150 140 aa10.1□□□□□ -0.79
SCAF8-204ENST00000461219 ACYP1P07311 99 aa10.05□□□□□ -0.8
SCAF8-204ENST00000461219 KRTAP9-8Q9BYQ0 159 aa10.05□□□□□ -0.8
SCAF8-204ENST00000461219 CRCT1Q9UGL9 99 aa10.05□□□□□ -0.8
SCAF8-204ENST00000461219 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
SCAF8-204ENST00000461219 TP53AIP1Q9HCN2 124 aa10□□□□□ -0.81
SCAF8-204ENST00000461219 FSIP2Q5CZC0 6907 aa9.97□□□□□ -0.81
SCAF8-204ENST00000461219 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.82
SCAF8-204ENST00000461219 MT2AP02795 61 aa9.96□□□□□ -0.82
SCAF8-204ENST00000461219 KRTAP10-10P60014 251 aa9.96□□□□□ -0.82
SCAF8-204ENST00000461219 C4orf26Q17RF5 130 aa9.94□□□□□ -0.82
SCAF8-204ENST00000461219 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
SCAF8-204ENST00000461219 HIST1H4AP62805 103 aaKnown RBP9.92□□□□□ -0.82
SCAF8-204ENST00000461219 A0A1B0GV90 55 aa9.9□□□□□ -0.82
SCAF8-204ENST00000461219 MT1FP04733 61 aa9.88□□□□□ -0.83
SCAF8-204ENST00000461219 TRAV22A0A0B4J277 110 aa9.8□□□□□ -0.84
SCAF8-204ENST00000461219 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
SCAF8-204ENST00000461219 C1orf64Q8NEQ6 169 aa9.79□□□□□ -0.84
SCAF8-204ENST00000461219 J3QR89 54 aa9.75□□□□□ -0.85
SCAF8-204ENST00000461219 S4R3F8 94 aa9.74□□□□□ -0.85
SCAF8-204ENST00000461219 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
SCAF8-204ENST00000461219 KRTAP9-3Q9BYQ3 159 aa9.73□□□□□ -0.85
SCAF8-204ENST00000461219 UQCRQO14949 82 aa9.72□□□□□ -0.85
SCAF8-204ENST00000461219 CYP4F30PQ9H0H9 118 aa9.72□□□□□ -0.85
SCAF8-204ENST00000461219 A0A087WVE0 104 aa9.71□□□□□ -0.86
SCAF8-204ENST00000461219 C5orf47Q569G3 176 aa9.7□□□□□ -0.86
SCAF8-204ENST00000461219 ATOX1O00244 68 aa9.69□□□□□ -0.86
SCAF8-204ENST00000461219 H0Y9P7 68 aa9.68□□□□□ -0.86
SCAF8-204ENST00000461219 LCE2BO14633 110 aa9.66□□□□□ -0.86
SCAF8-204ENST00000461219 KRTAP3-1Q9BYR8 98 aa9.66□□□□□ -0.86
SCAF8-204ENST00000461219 CSAG1Q6PB30 78 aa9.63□□□□□ -0.87
SCAF8-204ENST00000461219 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
SCAF8-204ENST00000461219 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
SCAF8-204ENST00000461219 LCA10Q71F78 164 aa9.6□□□□□ -0.87
SCAF8-204ENST00000461219 USH2AO75445 5202 aa9.58□□□□□ -0.88
SCAF8-204ENST00000461219 MP68P56378 58 aa9.56□□□□□ -0.88
SCAF8-204ENST00000461219 LINC00208Q96KT6 92 aa9.54□□□□□ -0.88
SCAF8-204ENST00000461219 SCGB1A1P11684 91 aa9.52□□□□□ -0.89
SCAF8-204ENST00000461219 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
SCAF8-204ENST00000461219 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
SCAF8-204ENST00000461219 KRTAP19-1Q8IUB9 90 aa9.48□□□□□ -0.89
SCAF8-204ENST00000461219 OCR1Q9BZK8 76 aa9.48□□□□□ -0.89
SCAF8-204ENST00000461219 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms