RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 BATFQ16520 125 aa9.57□□□□□ -0.88
COL9A2-205ENST00000461118 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
COL9A2-205ENST00000461118 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
COL9A2-205ENST00000461118 Q6ZQT0 140 aa9.55□□□□□ -0.88
COL9A2-205ENST00000461118 A0A1B0GW54 56 aa9.54□□□□□ -0.88
COL9A2-205ENST00000461118 NOTCH2NLQ7Z3S9 236 aa9.54□□□□□ -0.88
COL9A2-205ENST00000461118 PDE6GP18545 87 aa9.53□□□□□ -0.88
COL9A2-205ENST00000461118 KRTAP9-7A8MTY7 169 aa9.52□□□□□ -0.89
COL9A2-205ENST00000461118 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
COL9A2-205ENST00000461118 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
COL9A2-205ENST00000461118 SSPOA2VEC9 5147 aa9.52□□□□□ -0.89
COL9A2-205ENST00000461118 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
COL9A2-205ENST00000461118 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
COL9A2-205ENST00000461118 J3KT08 172 aa9.51□□□□□ -0.89
COL9A2-205ENST00000461118 A0A1B0GVX0 72 aa9.5□□□□□ -0.89
COL9A2-205ENST00000461118 USH2AO75445 5202 aa9.49□□□□□ -0.89
COL9A2-205ENST00000461118 TAX1BP3O14907 124 aa9.49□□□□□ -0.89
COL9A2-205ENST00000461118 C8orf87E5RJ46 101 aa9.48□□□□□ -0.89
COL9A2-205ENST00000461118 C14orf132Q9NPU4 83 aa9.47□□□□□ -0.89
COL9A2-205ENST00000461118 A0A1W2PPM0 123 aa9.46□□□□□ -0.9
COL9A2-205ENST00000461118 H3BT86 120 aa9.43□□□□□ -0.9
COL9A2-205ENST00000461118 NDUFB1O75438 58 aa9.41□□□□□ -0.9
COL9A2-205ENST00000461118 A8MWP4 228 aa9.38□□□□□ -0.91
COL9A2-205ENST00000461118 NREPQ16612 68 aa9.36□□□□□ -0.91
COL9A2-205ENST00000461118 KRTAP9-8Q9BYQ0 159 aa9.36□□□□□ -0.91
COL9A2-205ENST00000461118 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
COL9A2-205ENST00000461118 IGKV3D-7A0A0C4DH55 119 aa9.34□□□□□ -0.91
COL9A2-205ENST00000461118 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
COL9A2-205ENST00000461118 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
COL9A2-205ENST00000461118 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
COL9A2-205ENST00000461118 FCGBPQ9Y6R7 5405 aaPredicted RBP9.32□□□□□ -0.92
COL9A2-205ENST00000461118 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
COL9A2-205ENST00000461118 PRR15Q8IV56 129 aa9.3□□□□□ -0.92
COL9A2-205ENST00000461118 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
COL9A2-205ENST00000461118 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
COL9A2-205ENST00000461118 HRES1P13985 223 aa9.28□□□□□ -0.92
COL9A2-205ENST00000461118 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
COL9A2-205ENST00000461118 Q6ZVQ6 151 aa9.25□□□□□ -0.93
COL9A2-205ENST00000461118 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
COL9A2-205ENST00000461118 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.94
COL9A2-205ENST00000461118 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
COL9A2-205ENST00000461118 FAM236DA0A1B0GTK5 79 aa9.2□□□□□ -0.94
COL9A2-205ENST00000461118 FAM236CP0DP71 79 aa9.2□□□□□ -0.94
COL9A2-205ENST00000461118 SPINK7P58062 85 aa9.2□□□□□ -0.94
COL9A2-205ENST00000461118 TMEM254Q8TBM7 123 aa9.2□□□□□ -0.94
COL9A2-205ENST00000461118 K7EP34 96 aa9.19□□□□□ -0.94
COL9A2-205ENST00000461118 K7EQZ3 153 aa9.19□□□□□ -0.94
COL9A2-205ENST00000461118 BPY2O14599 106 aa9.18□□□□□ -0.94
COL9A2-205ENST00000461118 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
COL9A2-205ENST00000461118 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
COL9A2-205ENST00000461118 LCE2BO14633 110 aa9.15□□□□□ -0.94
COL9A2-205ENST00000461118 MT2AP02795 61 aa9.15□□□□□ -0.94
COL9A2-205ENST00000461118 KRTAP19-1Q8IUB9 90 aa9.15□□□□□ -0.94
COL9A2-205ENST00000461118 MACF1Q9UPN3 7388 aaKnown RBP9.14□□□□□ -0.95
COL9A2-205ENST00000461118 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
COL9A2-205ENST00000461118 PCP4L1A6NKN8 68 aa9.09□□□□□ -0.95
COL9A2-205ENST00000461118 GTF2H5Q6ZYL4 71 aa9.09□□□□□ -0.95
COL9A2-205ENST00000461118 LINC00846Q9NV44 126 aa9.09□□□□□ -0.95
COL9A2-205ENST00000461118 MT1FP04733 61 aa9.08□□□□□ -0.96
COL9A2-205ENST00000461118 KRTAP9-3Q9BYQ3 159 aa9.07□□□□□ -0.96
COL9A2-205ENST00000461118 F8W1H4 67 aa9.06□□□□□ -0.96
COL9A2-205ENST00000461118 NDUFS5O43920 106 aa9.06□□□□□ -0.96
COL9A2-205ENST00000461118 Q8N9L7 120 aa9.06□□□□□ -0.96
COL9A2-205ENST00000461118 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
COL9A2-205ENST00000461118 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
COL9A2-205ENST00000461118 CASC2Q6XLA1 102 aa9.03□□□□□ -0.96
COL9A2-205ENST00000461118 Q5W150 140 aa8.99□□□□□ -0.97
COL9A2-205ENST00000461118 ETDBQ3ZM63 59 aa8.98□□□□□ -0.97
COL9A2-205ENST00000461118 HCG22E2RYF7 251 aa8.96□□□□□ -0.98
COL9A2-205ENST00000461118 CXCL6P80162 114 aa8.94□□□□□ -0.98
COL9A2-205ENST00000461118 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
COL9A2-205ENST00000461118 C7orf65Q6ZTY9 151 aa8.92□□□□□ -0.98
COL9A2-205ENST00000461118 IGKV2D-30A0A075B6S6 120 aa8.91□□□□□ -0.98
COL9A2-205ENST00000461118 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
COL9A2-205ENST00000461118 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
COL9A2-205ENST00000461118 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
COL9A2-205ENST00000461118 ACYP1P07311 99 aa8.81□□□□□ -1
COL9A2-205ENST00000461118 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
COL9A2-205ENST00000461118 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
COL9A2-205ENST00000461118 FAM240AA0A1B0GVK7 77 aa8.76□□□□□ -1.01
COL9A2-205ENST00000461118 KRTAP6-3Q3LI67 103 aa8.73□□□□□ -1.01
COL9A2-205ENST00000461118 ATP5EP2Q5VTU8 51 aa8.69□□□□□ -1.02
COL9A2-205ENST00000461118 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
COL9A2-205ENST00000461118 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
COL9A2-205ENST00000461118 A0A1B0GV90 55 aa8.61□□□□□ -1.03
COL9A2-205ENST00000461118 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
COL9A2-205ENST00000461118 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
COL9A2-205ENST00000461118 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
COL9A2-205ENST00000461118 LINC00643Q86TS7 51 aa8.59□□□□□ -1.03
COL9A2-205ENST00000461118 NEBP20929 6669 aa8.58□□□□□ -1.04
COL9A2-205ENST00000461118 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
COL9A2-205ENST00000461118 S4R3F8 94 aa8.56□□□□□ -1.04
COL9A2-205ENST00000461118 UQCRQO14949 82 aa8.54□□□□□ -1.04
COL9A2-205ENST00000461118 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
COL9A2-205ENST00000461118 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
COL9A2-205ENST00000461118 LCA10Q71F78 164 aa8.51□□□□□ -1.05
COL9A2-205ENST00000461118 A0A087WVE0 104 aa8.5□□□□□ -1.05
COL9A2-205ENST00000461118 ATOX1O00244 68 aa8.49□□□□□ -1.05
COL9A2-205ENST00000461118 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.06
COL9A2-205ENST00000461118 H0Y9P7 68 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 686.2 ms