RNA–Protein interactions for RNA: ENST00000460750.5

KCNT1-203, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 1 (best)

Gene KCNT1, Length 4,738 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-203ENST00000460750 NF1P21359 2839 aa9.94□□□□□ -0.82
KCNT1-203ENST00000460750 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
KCNT1-203ENST00000460750 CELSR2Q9HCU4 2923 aa9.93□□□□□ -0.82
KCNT1-203ENST00000460750 ROMO1P60602 79 aa9.91□□□□□ -0.82
KCNT1-203ENST00000460750 NIPBLQ6KC79 2804 aaeCLIP9.91□□□□□ -0.82
KCNT1-203ENST00000460750 DCHS2Q6V1P9 2916 aa9.9□□□□□ -0.82
KCNT1-203ENST00000460750 RELNP78509 3460 aa9.89□□□□□ -0.83
KCNT1-203ENST00000460750 FBN2P35556 2912 aa9.88□□□□□ -0.83
KCNT1-203ENST00000460750 KRTAP1-5Q9BYS1 174 aa9.88□□□□□ -0.83
KCNT1-203ENST00000460750 DMDP11532 3685 aa9.86□□□□□ -0.83
KCNT1-203ENST00000460750 LAMA5O15230 3695 aa9.84□□□□□ -0.83
KCNT1-203ENST00000460750 A0A087X002 238 aa9.83□□□□□ -0.84
KCNT1-203ENST00000460750 RPL37P61927 97 aaKnown RBP9.83□□□□□ -0.84
KCNT1-203ENST00000460750 Q6ZSA8 131 aa9.8□□□□□ -0.84
KCNT1-203ENST00000460750 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
KCNT1-203ENST00000460750 ASPMQ8IZT6 3477 aa9.8□□□□□ -0.84
KCNT1-203ENST00000460750 DCHS1Q96JQ0 3298 aa9.79□□□□□ -0.84
KCNT1-203ENST00000460750 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
KCNT1-203ENST00000460750 KMT2BQ9UMN6 2715 aaPredicted RBP9.78□□□□□ -0.84
KCNT1-203ENST00000460750 NDUFAF8A1L188 74 aa9.76□□□□□ -0.85
KCNT1-203ENST00000460750 NOTCH2NLQ7Z3S9 236 aa9.72□□□□□ -0.85
KCNT1-203ENST00000460750 ZFHX4Q86UP3 3567 aa9.71□□□□□ -0.86
KCNT1-203ENST00000460750 LINC00483Q53H64 154 aa9.68□□□□□ -0.86
KCNT1-203ENST00000460750 CAMK2N1Q7Z7J9 78 aa9.64□□□□□ -0.87
KCNT1-203ENST00000460750 PANO1I0J062 215 aa9.63□□□□□ -0.87
KCNT1-203ENST00000460750 A8MUU9 505 aa9.6□□□□□ -0.87
KCNT1-203ENST00000460750 KRTAP10-1P60331 282 aa9.59□□□□□ -0.87
KCNT1-203ENST00000460750 S4R3F8 94 aa9.59□□□□□ -0.87
KCNT1-203ENST00000460750 KRTAP10-2P60368 255 aa9.57□□□□□ -0.88
KCNT1-203ENST00000460750 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
KCNT1-203ENST00000460750 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
KCNT1-203ENST00000460750 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
KCNT1-203ENST00000460750 R4GN34 69 aa9.47□□□□□ -0.89
KCNT1-203ENST00000460750 SMG1Q96Q15 3661 aaKnown RBP9.47□□□□□ -0.89
KCNT1-203ENST00000460750 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
KCNT1-203ENST00000460750 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
KCNT1-203ENST00000460750 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
KCNT1-203ENST00000460750 Q5VSD8 79 aa9.4□□□□□ -0.9
KCNT1-203ENST00000460750 M0R2T5 61 aa9.4□□□□□ -0.9
KCNT1-203ENST00000460750 CELSR1Q9NYQ6 3014 aa9.4□□□□□ -0.91
KCNT1-203ENST00000460750 PDZD2O15018 2839 aa9.38□□□□□ -0.91
KCNT1-203ENST00000460750 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
KCNT1-203ENST00000460750 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
KCNT1-203ENST00000460750 TENM3Q9P273 2699 aa9.32□□□□□ -0.92
KCNT1-203ENST00000460750 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
KCNT1-203ENST00000460750 M0QZ58 72 aa9.27□□□□□ -0.93
KCNT1-203ENST00000460750 RPS29P62273 56 aaKnown RBP9.25□□□□□ -0.93
KCNT1-203ENST00000460750 VWFP04275 2813 aa9.21□□□□□ -0.93
KCNT1-203ENST00000460750 SVEP1Q4LDE5 3571 aa9.21□□□□□ -0.94
KCNT1-203ENST00000460750 H0YAA0 97 aa9.2□□□□□ -0.94
KCNT1-203ENST00000460750 OTOGQ6ZRI0 2925 aa9.2□□□□□ -0.94
KCNT1-203ENST00000460750 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
KCNT1-203ENST00000460750 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
KCNT1-203ENST00000460750 SPENQ96T58 3664 aaKnown RBP9.15□□□□□ -0.94
KCNT1-203ENST00000460750 NBPF19A0A087WUL8 3843 aa9.11□□□□□ -0.95
KCNT1-203ENST00000460750 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
KCNT1-203ENST00000460750 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
KCNT1-203ENST00000460750 BSNQ9UPA5 3926 aa9.08□□□□□ -0.96
KCNT1-203ENST00000460750 P0C880 135 aa8.99□□□□□ -0.97
KCNT1-203ENST00000460750 CSMD2Q7Z408 3487 aa8.98□□□□□ -0.97
KCNT1-203ENST00000460750 CUBNO60494 3623 aa8.93□□□□□ -0.98
KCNT1-203ENST00000460750 ZFHX3Q15911 3703 aa8.93□□□□□ -0.98
KCNT1-203ENST00000460750 PKD1L1Q8TDX9 2849 aa8.91□□□□□ -0.98
KCNT1-203ENST00000460750 TENM2Q9NT68 2774 aa8.89□□□□□ -0.99
KCNT1-203ENST00000460750 TGP01266 2768 aa8.89□□□□□ -0.99
KCNT1-203ENST00000460750 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
KCNT1-203ENST00000460750 ANK3Q12955 4377 aaKnown RBP8.85□□□□□ -0.99
KCNT1-203ENST00000460750 KRTAP1-4P0C5Y4 121 aa8.78□□□□□ -1
KCNT1-203ENST00000460750 PP632Q6XCG6 107 aa8.72□□□□□ -1.01
KCNT1-203ENST00000460750 TRRAPQ9Y4A5 3859 aa8.71□□□□□ -1.02
KCNT1-203ENST00000460750 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
KCNT1-203ENST00000460750 TPRXLQ17RH7 258 aa8.65□□□□□ -1.03
KCNT1-203ENST00000460750 TNP1P09430 55 aa8.62□□□□□ -1.03
KCNT1-203ENST00000460750 XP32Q5T750 250 aa8.6□□□□□ -1.03
KCNT1-203ENST00000460750 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
KCNT1-203ENST00000460750 FBN3Q75N90 2809 aa8.45□□□□□ -1.06
KCNT1-203ENST00000460750 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
KCNT1-203ENST00000460750 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
KCNT1-203ENST00000460750 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
KCNT1-203ENST00000460750 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
KCNT1-203ENST00000460750 KRTAP15-1Q3LI76 137 aa8.37□□□□□ -1.07
KCNT1-203ENST00000460750 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
KCNT1-203ENST00000460750 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
KCNT1-203ENST00000460750 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
KCNT1-203ENST00000460750 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
KCNT1-203ENST00000460750 HUWE1Q7Z6Z7 4374 aaKnown RBP8.18□□□□□ -1.1
KCNT1-203ENST00000460750 AKAP9Q99996 3911 aa8.16□□□□□ -1.1
KCNT1-203ENST00000460750 COL7A1Q02388 2944 aa8.15□□□□□ -1.11
KCNT1-203ENST00000460750 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
KCNT1-203ENST00000460750 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
KCNT1-203ENST00000460750 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
KCNT1-203ENST00000460750 DNAH9Q9NYC9 4486 aa7.91□□□□□ -1.14
KCNT1-203ENST00000460750 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
KCNT1-203ENST00000460750 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
KCNT1-203ENST00000460750 INE1O15225 51 aa7.83□□□□□ -1.16
KCNT1-203ENST00000460750 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
KCNT1-203ENST00000460750 PLECQ15149 4684 aaKnown RBP7.75□□□□□ -1.17
KCNT1-203ENST00000460750 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
KCNT1-203ENST00000460750 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
KCNT1-203ENST00000460750 DNAH1Q9P2D7 4330 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms