RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 A6NN06 94 aa8.14□□□□□ -1.11
SMTN-213ENST00000460658 PANO1I0J062 215 aa8.14□□□□□ -1.11
SMTN-213ENST00000460658 Q5VSD8 79 aa8.13□□□□□ -1.11
SMTN-213ENST00000460658 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
SMTN-213ENST00000460658 KRTAP13-1Q8IUC0 172 aa8.1□□□□□ -1.11
SMTN-213ENST00000460658 NOTCH1P46531 2555 aa8.09□□□□□ -1.11
SMTN-213ENST00000460658 GCN1Q92616 2671 aaKnown RBP8.08□□□□□ -1.12
SMTN-213ENST00000460658 A0A087X002 238 aa8.07□□□□□ -1.12
SMTN-213ENST00000460658 IGSF10Q6WRI0 2623 aa8.07□□□□□ -1.12
SMTN-213ENST00000460658 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
SMTN-213ENST00000460658 CSMD1Q96PZ7 3565 aa8.06□□□□□ -1.12
SMTN-213ENST00000460658 C20orf166-AS1Q96NR2 134 aa8.06□□□□□ -1.12
SMTN-213ENST00000460658 DCHS2Q6V1P9 2916 aa8.06□□□□□ -1.12
SMTN-213ENST00000460658 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
SMTN-213ENST00000460658 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
SMTN-213ENST00000460658 COL12A1Q99715 3063 aa8.04□□□□□ -1.12
SMTN-213ENST00000460658 LAMA5O15230 3695 aa8.04□□□□□ -1.12
SMTN-213ENST00000460658 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.12
SMTN-213ENST00000460658 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
SMTN-213ENST00000460658 FLNCQ14315 2725 aa8□□□□□ -1.13
SMTN-213ENST00000460658 BAHCC1Q9P281 2608 aa8□□□□□ -1.13
SMTN-213ENST00000460658 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
SMTN-213ENST00000460658 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
SMTN-213ENST00000460658 RELNP78509 3460 aa7.97□□□□□ -1.13
SMTN-213ENST00000460658 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.13
SMTN-213ENST00000460658 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.14
SMTN-213ENST00000460658 UBR5O95071 2799 aaPredicted RBP7.95□□□□□ -1.14
SMTN-213ENST00000460658 ZANQ9Y493 2812 aa7.93□□□□□ -1.14
SMTN-213ENST00000460658 UTP20O75691 2785 aaKnown RBP7.93□□□□□ -1.14
SMTN-213ENST00000460658 KRTAP13-2Q52LG2 175 aa7.9□□□□□ -1.14
SMTN-213ENST00000460658 NSD1Q96L73 2696 aaPredicted RBP7.89□□□□□ -1.15
SMTN-213ENST00000460658 SPENQ96T58 3664 aaKnown RBP7.86□□□□□ -1.15
SMTN-213ENST00000460658 KMT2BQ9UMN6 2715 aaPredicted RBP7.86□□□□□ -1.15
SMTN-213ENST00000460658 KRTAP21-3Q3LHN1 58 aa7.83□□□□□ -1.16
SMTN-213ENST00000460658 ITPR2Q14571 2701 aa7.82□□□□□ -1.16
SMTN-213ENST00000460658 SVEP1Q4LDE5 3571 aa7.82□□□□□ -1.16
SMTN-213ENST00000460658 A8MUU9 505 aa7.82□□□□□ -1.16
SMTN-213ENST00000460658 A8MU10 97 aa7.8□□□□□ -1.16
SMTN-213ENST00000460658 MXRA5Q9NR99 2828 aa7.78□□□□□ -1.16
SMTN-213ENST00000460658 BSNQ9UPA5 3926 aa7.78□□□□□ -1.16
SMTN-213ENST00000460658 TNP1P09430 55 aa7.78□□□□□ -1.16
SMTN-213ENST00000460658 CELSR1Q9NYQ6 3014 aa7.77□□□□□ -1.16
SMTN-213ENST00000460658 FBN2P35556 2912 aa7.77□□□□□ -1.17
SMTN-213ENST00000460658 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
SMTN-213ENST00000460658 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
SMTN-213ENST00000460658 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
SMTN-213ENST00000460658 APCP25054 2843 aa7.71□□□□□ -1.18
SMTN-213ENST00000460658 NF1P21359 2839 aa7.7□□□□□ -1.18
SMTN-213ENST00000460658 CELSR2Q9HCU4 2923 aa7.63□□□□□ -1.19
SMTN-213ENST00000460658 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
SMTN-213ENST00000460658 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
SMTN-213ENST00000460658 P0C880 135 aa7.55□□□□□ -1.2
SMTN-213ENST00000460658 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
SMTN-213ENST00000460658 TENM4Q6N022 2769 aa7.51□□□□□ -1.21
SMTN-213ENST00000460658 XP32Q5T750 250 aa7.45□□□□□ -1.22
SMTN-213ENST00000460658 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
SMTN-213ENST00000460658 ZFHX3Q15911 3703 aa7.4□□□□□ -1.22
SMTN-213ENST00000460658 H0YAA0 97 aa7.38□□□□□ -1.23
SMTN-213ENST00000460658 CUBNO60494 3623 aa7.36□□□□□ -1.23
SMTN-213ENST00000460658 VPS13CQ709C8 3753 aa7.35□□□□□ -1.23
SMTN-213ENST00000460658 CSMD2Q7Z408 3487 aa7.34□□□□□ -1.23
SMTN-213ENST00000460658 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
SMTN-213ENST00000460658 PDZD2O15018 2839 aa7.29□□□□□ -1.24
SMTN-213ENST00000460658 VWFP04275 2813 aa7.28□□□□□ -1.24
SMTN-213ENST00000460658 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
SMTN-213ENST00000460658 TENM3Q9P273 2699 aa7.27□□□□□ -1.24
SMTN-213ENST00000460658 TENM1Q9UKZ4 2725 aa7.24□□□□□ -1.25
SMTN-213ENST00000460658 ANK3Q12955 4377 aaKnown RBP7.22□□□□□ -1.25
SMTN-213ENST00000460658 NBPF19A0A087WUL8 3843 aa7.11□□□□□ -1.27
SMTN-213ENST00000460658 AKAP9Q99996 3911 aa7.11□□□□□ -1.27
SMTN-213ENST00000460658 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.27
SMTN-213ENST00000460658 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
SMTN-213ENST00000460658 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
SMTN-213ENST00000460658 OTOGQ6ZRI0 2925 aa7.01□□□□□ -1.29
SMTN-213ENST00000460658 ZNF469Q96JG9 3925 aaPredicted RBP7□□□□□ -1.29
SMTN-213ENST00000460658 TRRAPQ9Y4A5 3859 aa6.97□□□□□ -1.29
SMTN-213ENST00000460658 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
SMTN-213ENST00000460658 TENM2Q9NT68 2774 aa6.94□□□□□ -1.3
SMTN-213ENST00000460658 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.31
SMTN-213ENST00000460658 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
SMTN-213ENST00000460658 SRRM2Q9UQ35 2752 aaKnown RBP6.88□□□□□ -1.31
SMTN-213ENST00000460658 TGP01266 2768 aa6.86□□□□□ -1.31
SMTN-213ENST00000460658 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
SMTN-213ENST00000460658 INE1O15225 51 aa6.84□□□□□ -1.31
SMTN-213ENST00000460658 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
SMTN-213ENST00000460658 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
SMTN-213ENST00000460658 HUWE1Q7Z6Z7 4374 aaKnown RBP6.72□□□□□ -1.33
SMTN-213ENST00000460658 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
SMTN-213ENST00000460658 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
SMTN-213ENST00000460658 FBN3Q75N90 2809 aa6.54□□□□□ -1.36
SMTN-213ENST00000460658 MEGF8Q7Z7M0 2845 aa6.54□□□□□ -1.36
SMTN-213ENST00000460658 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
SMTN-213ENST00000460658 CSMD3Q7Z407 3707 aa6.51□□□□□ -1.37
SMTN-213ENST00000460658 COL7A1Q02388 2944 aa6.5□□□□□ -1.37
SMTN-213ENST00000460658 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
SMTN-213ENST00000460658 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
SMTN-213ENST00000460658 DNAH9Q9NYC9 4486 aa6.42□□□□□ -1.38
SMTN-213ENST00000460658 DNAH1Q9P2D7 4330 aa6.41□□□□□ -1.38
SMTN-213ENST00000460658 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
SMTN-213ENST00000460658 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms