RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
ERCC3-205ENST00000460485 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
ERCC3-205ENST00000460485 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
ERCC3-205ENST00000460485 Q96NJ1 140 aa8.38□□□□□ -1.07
ERCC3-205ENST00000460485 FAT1Q14517 4588 aa8.37□□□□□ -1.07
ERCC3-205ENST00000460485 VPS13BQ7Z7G8 4022 aa8.37□□□□□ -1.07
ERCC3-205ENST00000460485 J3QL48 77 aa8.36□□□□□ -1.07
ERCC3-205ENST00000460485 Q5XG85 94 aa8.36□□□□□ -1.07
ERCC3-205ENST00000460485 CYSTM1Q9H1C7 97 aa8.36□□□□□ -1.07
ERCC3-205ENST00000460485 DEFB116Q30KQ4 102 aa8.35□□□□□ -1.07
ERCC3-205ENST00000460485 MP68P56378 58 aa8.34□□□□□ -1.07
ERCC3-205ENST00000460485 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
ERCC3-205ENST00000460485 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.07
ERCC3-205ENST00000460485 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
ERCC3-205ENST00000460485 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
ERCC3-205ENST00000460485 SNURFQ9Y675 71 aa8.33□□□□□ -1.08
ERCC3-205ENST00000460485 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
ERCC3-205ENST00000460485 LIMD2Q9BT23 127 aa8.31□□□□□ -1.08
ERCC3-205ENST00000460485 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
ERCC3-205ENST00000460485 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
ERCC3-205ENST00000460485 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
ERCC3-205ENST00000460485 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
ERCC3-205ENST00000460485 C8orf17Q9NRJ1 99 aa8.29□□□□□ -1.08
ERCC3-205ENST00000460485 ANAPC11Q9NYG5 84 aa8.29□□□□□ -1.08
ERCC3-205ENST00000460485 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
ERCC3-205ENST00000460485 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
ERCC3-205ENST00000460485 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-205ENST00000460485 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
ERCC3-205ENST00000460485 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
ERCC3-205ENST00000460485 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
ERCC3-205ENST00000460485 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
ERCC3-205ENST00000460485 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
ERCC3-205ENST00000460485 H0Y9P7 68 aa8.22□□□□□ -1.09
ERCC3-205ENST00000460485 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
ERCC3-205ENST00000460485 MRPL34Q9BQ48 92 aaKnown RBP8.22□□□□□ -1.09
ERCC3-205ENST00000460485 A0A087X002 238 aa8.21□□□□□ -1.1
ERCC3-205ENST00000460485 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
ERCC3-205ENST00000460485 SPINK1P00995 79 aa8.2□□□□□ -1.1
ERCC3-205ENST00000460485 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
ERCC3-205ENST00000460485 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
ERCC3-205ENST00000460485 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
ERCC3-205ENST00000460485 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
ERCC3-205ENST00000460485 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
ERCC3-205ENST00000460485 CYP4F30PQ9H0H9 118 aa8.15□□□□□ -1.1
ERCC3-205ENST00000460485 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
ERCC3-205ENST00000460485 C1orf64Q8NEQ6 169 aa8.13□□□□□ -1.11
ERCC3-205ENST00000460485 NDUFS5O43920 106 aa8.12□□□□□ -1.11
ERCC3-205ENST00000460485 OXTP01178 125 aa8.12□□□□□ -1.11
ERCC3-205ENST00000460485 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
ERCC3-205ENST00000460485 LINC00313P59037 77 aa8.11□□□□□ -1.11
ERCC3-205ENST00000460485 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
ERCC3-205ENST00000460485 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
ERCC3-205ENST00000460485 LRP1Q07954 4544 aaKnown RBP8.08□□□□□ -1.12
ERCC3-205ENST00000460485 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
ERCC3-205ENST00000460485 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
ERCC3-205ENST00000460485 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
ERCC3-205ENST00000460485 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
ERCC3-205ENST00000460485 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
ERCC3-205ENST00000460485 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
ERCC3-205ENST00000460485 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
ERCC3-205ENST00000460485 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
ERCC3-205ENST00000460485 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
ERCC3-205ENST00000460485 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
ERCC3-205ENST00000460485 KRTAP16-1A8MUX0 517 aa7.97□□□□□ -1.13
ERCC3-205ENST00000460485 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
ERCC3-205ENST00000460485 V9GYY9 64 aa7.94□□□□□ -1.14
ERCC3-205ENST00000460485 LRP2P98164 4655 aa7.93□□□□□ -1.14
ERCC3-205ENST00000460485 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
ERCC3-205ENST00000460485 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
ERCC3-205ENST00000460485 Q5W150 140 aa7.89□□□□□ -1.15
ERCC3-205ENST00000460485 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
ERCC3-205ENST00000460485 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
ERCC3-205ENST00000460485 PRR4Q16378 134 aa7.87□□□□□ -1.15
ERCC3-205ENST00000460485 Q1T7F1 81 aa7.87□□□□□ -1.15
ERCC3-205ENST00000460485 COA5Q86WW8 74 aa7.83□□□□□ -1.16
ERCC3-205ENST00000460485 TNXBP22105 4242 aa7.82□□□□□ -1.16
ERCC3-205ENST00000460485 C4orf26Q17RF5 130 aa7.81□□□□□ -1.16
ERCC3-205ENST00000460485 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
ERCC3-205ENST00000460485 A8MUU9 505 aa7.8□□□□□ -1.16
ERCC3-205ENST00000460485 ACYP2P14621 99 aa7.8□□□□□ -1.16
ERCC3-205ENST00000460485 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
ERCC3-205ENST00000460485 C7orf65Q6ZTY9 151 aa7.79□□□□□ -1.16
ERCC3-205ENST00000460485 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
ERCC3-205ENST00000460485 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
ERCC3-205ENST00000460485 HRES1P13985 223 aa7.76□□□□□ -1.17
ERCC3-205ENST00000460485 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
ERCC3-205ENST00000460485 A8MUN3 132 aa7.73□□□□□ -1.17
ERCC3-205ENST00000460485 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
ERCC3-205ENST00000460485 Q75L30 129 aa7.72□□□□□ -1.17
ERCC3-205ENST00000460485 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
ERCC3-205ENST00000460485 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
ERCC3-205ENST00000460485 SVIPQ8NHG7 77 aa7.68□□□□□ -1.18
ERCC3-205ENST00000460485 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
ERCC3-205ENST00000460485 C9orf92A6NGG3 77 aa7.66□□□□□ -1.18
ERCC3-205ENST00000460485 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
ERCC3-205ENST00000460485 PRO0628Q9UI54 55 aa7.61□□□□□ -1.19
ERCC3-205ENST00000460485 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
ERCC3-205ENST00000460485 PSPHP1O15172 72 aa7.57□□□□□ -1.2
ERCC3-205ENST00000460485 Q5VV11 94 aa7.57□□□□□ -1.2
ERCC3-205ENST00000460485 SPTSSBQ8NFR3 76 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms