RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
COL18A1-206ENST00000459895 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
COL18A1-206ENST00000459895 F8W1H4 67 aa6.85□□□□□ -1.31
COL18A1-206ENST00000459895 J3KT08 172 aa6.85□□□□□ -1.31
COL18A1-206ENST00000459895 Q75L30 129 aa6.85□□□□□ -1.31
COL18A1-206ENST00000459895 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
COL18A1-206ENST00000459895 C20orf166-AS1Q96NR2 134 aa6.84□□□□□ -1.31
COL18A1-206ENST00000459895 A0A1B0GV90 55 aa6.82□□□□□ -1.32
COL18A1-206ENST00000459895 A8MUU9 505 aa6.82□□□□□ -1.32
COL18A1-206ENST00000459895 A8MWP4 228 aa6.82□□□□□ -1.32
COL18A1-206ENST00000459895 LINC00313P59037 77 aa6.82□□□□□ -1.32
COL18A1-206ENST00000459895 NREPQ16612 68 aa6.82□□□□□ -1.32
COL18A1-206ENST00000459895 IGKV3D-7A0A0C4DH55 119 aa6.8□□□□□ -1.32
COL18A1-206ENST00000459895 C8orf87E5RJ46 101 aa6.8□□□□□ -1.32
COL18A1-206ENST00000459895 Q6ZVQ6 151 aa6.8□□□□□ -1.32
COL18A1-206ENST00000459895 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
COL18A1-206ENST00000459895 K7EQZ3 153 aa6.78□□□□□ -1.32
COL18A1-206ENST00000459895 LINC00846Q9NV44 126 aa6.78□□□□□ -1.32
COL18A1-206ENST00000459895 NDUFB1O75438 58 aa6.77□□□□□ -1.33
COL18A1-206ENST00000459895 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
COL18A1-206ENST00000459895 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
COL18A1-206ENST00000459895 BPY2O14599 106 aa6.75□□□□□ -1.33
COL18A1-206ENST00000459895 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
COL18A1-206ENST00000459895 PRR15Q8IV56 129 aa6.75□□□□□ -1.33
COL18A1-206ENST00000459895 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
COL18A1-206ENST00000459895 Q8N9L7 120 aa6.73□□□□□ -1.33
COL18A1-206ENST00000459895 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
COL18A1-206ENST00000459895 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
COL18A1-206ENST00000459895 Q8N9P0 234 aaPredicted RBP6.68□□□□□ -1.34
COL18A1-206ENST00000459895 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
COL18A1-206ENST00000459895 FAM240AA0A1B0GVK7 77 aa6.66□□□□□ -1.34
COL18A1-206ENST00000459895 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
COL18A1-206ENST00000459895 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
COL18A1-206ENST00000459895 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
COL18A1-206ENST00000459895 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.34
COL18A1-206ENST00000459895 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
COL18A1-206ENST00000459895 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
COL18A1-206ENST00000459895 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
COL18A1-206ENST00000459895 ACYP1P07311 99 aa6.61□□□□□ -1.35
COL18A1-206ENST00000459895 CXCL6P80162 114 aa6.61□□□□□ -1.35
COL18A1-206ENST00000459895 HCG22E2RYF7 251 aa6.59□□□□□ -1.35
COL18A1-206ENST00000459895 NDUFS5O43920 106 aa6.59□□□□□ -1.35
COL18A1-206ENST00000459895 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
COL18A1-206ENST00000459895 HRES1P13985 223 aa6.56□□□□□ -1.36
COL18A1-206ENST00000459895 MT1HP80294 61 aa6.56□□□□□ -1.36
COL18A1-206ENST00000459895 ATP5EP2Q5VTU8 51 aa6.56□□□□□ -1.36
COL18A1-206ENST00000459895 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
COL18A1-206ENST00000459895 SPINK7P58062 85 aa6.51□□□□□ -1.37
COL18A1-206ENST00000459895 MPLKIPQ8TAP9 179 aa6.51□□□□□ -1.37
COL18A1-206ENST00000459895 Q5W150 140 aa6.5□□□□□ -1.37
COL18A1-206ENST00000459895 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
COL18A1-206ENST00000459895 J3QR89 54 aa6.48□□□□□ -1.37
COL18A1-206ENST00000459895 HIST1H4AP62805 103 aaKnown RBP6.47□□□□□ -1.37
COL18A1-206ENST00000459895 A0A087WVE0 104 aa6.46□□□□□ -1.38
COL18A1-206ENST00000459895 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
COL18A1-206ENST00000459895 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
COL18A1-206ENST00000459895 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
COL18A1-206ENST00000459895 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
COL18A1-206ENST00000459895 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
COL18A1-206ENST00000459895 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
COL18A1-206ENST00000459895 M0R2T5 61 aa6.4□□□□□ -1.38
COL18A1-206ENST00000459895 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
COL18A1-206ENST00000459895 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
COL18A1-206ENST00000459895 K7ERU9 68 aa6.37□□□□□ -1.39
COL18A1-206ENST00000459895 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
COL18A1-206ENST00000459895 TRAV22A0A0B4J277 110 aa6.36□□□□□ -1.39
COL18A1-206ENST00000459895 MT-ATP8P03928 68 aa6.31□□□□□ -1.4
COL18A1-206ENST00000459895 UQCRQO14949 82 aa6.3□□□□□ -1.4
COL18A1-206ENST00000459895 C4orf26Q17RF5 130 aa6.3□□□□□ -1.4
COL18A1-206ENST00000459895 H0Y9P7 68 aa6.29□□□□□ -1.4
COL18A1-206ENST00000459895 OCR1Q9BZK8 76 aa6.28□□□□□ -1.4
COL18A1-206ENST00000459895 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
COL18A1-206ENST00000459895 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
COL18A1-206ENST00000459895 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
COL18A1-206ENST00000459895 CYP4F30PQ9H0H9 118 aa6.25□□□□□ -1.41
COL18A1-206ENST00000459895 ATOX1O00244 68 aa6.24□□□□□ -1.41
COL18A1-206ENST00000459895 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
COL18A1-206ENST00000459895 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
COL18A1-206ENST00000459895 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
COL18A1-206ENST00000459895 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
COL18A1-206ENST00000459895 FAM236BA0A1B0GV22 79 aa6.21□□□□□ -1.42
COL18A1-206ENST00000459895 C1orf64Q8NEQ6 169 aa6.2□□□□□ -1.42
COL18A1-206ENST00000459895 MT2AP02795 61 aa6.19□□□□□ -1.42
COL18A1-206ENST00000459895 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
COL18A1-206ENST00000459895 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
COL18A1-206ENST00000459895 MP68P56378 58 aa6.17□□□□□ -1.42
COL18A1-206ENST00000459895 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
COL18A1-206ENST00000459895 MT1FP04733 61 aa6.15□□□□□ -1.42
COL18A1-206ENST00000459895 KLKP1Q107X0 134 aa6.15□□□□□ -1.42
COL18A1-206ENST00000459895 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
COL18A1-206ENST00000459895 S4R3F8 94 aa6.14□□□□□ -1.43
COL18A1-206ENST00000459895 H3BPC8 53 aa6.11□□□□□ -1.43
COL18A1-206ENST00000459895 LCA10Q71F78 164 aa6.11□□□□□ -1.43
COL18A1-206ENST00000459895 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
COL18A1-206ENST00000459895 SMIM20Q8N5G0 67 aa6.08□□□□□ -1.44
COL18A1-206ENST00000459895 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
COL18A1-206ENST00000459895 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
COL18A1-206ENST00000459895 A8MUN3 132 aa6.02□□□□□ -1.45
COL18A1-206ENST00000459895 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
COL18A1-206ENST00000459895 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms