RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 KRTAP16-1A8MUX0 517 aa5.14□□□□□ -1.59
HDLBP-228ENST00000459788 DSCR10P59022 87 aa5.14□□□□□ -1.59
HDLBP-228ENST00000459788 RBM3P98179 157 aaKnown RBP5.14□□□□□ -1.59
HDLBP-228ENST00000459788 A0A1B0GW54 56 aa5.13□□□□□ -1.59
HDLBP-228ENST00000459788 C8orf87E5RJ46 101 aa5.13□□□□□ -1.59
HDLBP-228ENST00000459788 SCGB1C2P0DMR2 95 aa5.13□□□□□ -1.59
HDLBP-228ENST00000459788 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
HDLBP-228ENST00000459788 J3KT08 172 aa5.12□□□□□ -1.59
HDLBP-228ENST00000459788 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
HDLBP-228ENST00000459788 C9JAW5 83 aa5.1□□□□□ -1.59
HDLBP-228ENST00000459788 M0R143 59 aa5.1□□□□□ -1.59
HDLBP-228ENST00000459788 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
HDLBP-228ENST00000459788 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.59
HDLBP-228ENST00000459788 A0A1B0GVX0 72 aa5.09□□□□□ -1.59
HDLBP-228ENST00000459788 JMJD7-PLA2G4BH0Y9G9 81 aa5.09□□□□□ -1.59
HDLBP-228ENST00000459788 BAALC-AS2P0C853 105 aa5.09□□□□□ -1.59
HDLBP-228ENST00000459788 PDE6GP18545 87 aa5.09□□□□□ -1.59
HDLBP-228ENST00000459788 IGHV6-1A0A0B4J1U7 121 aa5.08□□□□□ -1.6
HDLBP-228ENST00000459788 A0A1B0GV72 72 aa5.07□□□□□ -1.6
HDLBP-228ENST00000459788 ATXN8Q156A1 80 aa5.07□□□□□ -1.6
HDLBP-228ENST00000459788 Q6ZQT0 140 aa5.07□□□□□ -1.6
HDLBP-228ENST00000459788 MPLKIPQ8TAP9 179 aa5.07□□□□□ -1.6
HDLBP-228ENST00000459788 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
HDLBP-228ENST00000459788 LOC110117498A0A087WWA1 95 aa5.06□□□□□ -1.6
HDLBP-228ENST00000459788 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
HDLBP-228ENST00000459788 VPS25Q9BRG1 176 aa5.06□□□□□ -1.6
HDLBP-228ENST00000459788 NDUFB1O75438 58 aa5.05□□□□□ -1.6
HDLBP-228ENST00000459788 DEFB116Q30KQ4 102 aa5.05□□□□□ -1.6
HDLBP-228ENST00000459788 LYRM7Q5U5X0 104 aa5.05□□□□□ -1.6
HDLBP-228ENST00000459788 HRES1P13985 223 aa5.04□□□□□ -1.6
HDLBP-228ENST00000459788 MTURNQ8N3F0 131 aa5.04□□□□□ -1.6
HDLBP-228ENST00000459788 FAM236DA0A1B0GTK5 79 aa5.03□□□□□ -1.6
HDLBP-228ENST00000459788 SMIM6P0DI80 62 aa5.03□□□□□ -1.6
HDLBP-228ENST00000459788 FAM236CP0DP71 79 aa5.03□□□□□ -1.6
HDLBP-228ENST00000459788 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
HDLBP-228ENST00000459788 ZCCHC13Q8WW36 166 aaKnown RBP5.02□□□□□ -1.61
HDLBP-228ENST00000459788 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
HDLBP-228ENST00000459788 A8MWP4 228 aa5.01□□□□□ -1.61
HDLBP-228ENST00000459788 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
HDLBP-228ENST00000459788 C8orf17Q9NRJ1 99 aa4.97□□□□□ -1.61
HDLBP-228ENST00000459788 SPINK7P58062 85 aa4.96□□□□□ -1.62
HDLBP-228ENST00000459788 IGKV3D-7A0A0C4DH55 119 aa4.95□□□□□ -1.62
HDLBP-228ENST00000459788 H3BT86 120 aa4.95□□□□□ -1.62
HDLBP-228ENST00000459788 NREPQ16612 68 aa4.95□□□□□ -1.62
HDLBP-228ENST00000459788 PRR15Q8IV56 129 aa4.95□□□□□ -1.62
HDLBP-228ENST00000459788 C14orf132Q9NPU4 83 aa4.95□□□□□ -1.62
HDLBP-228ENST00000459788 Q6ZVQ6 151 aa4.94□□□□□ -1.62
HDLBP-228ENST00000459788 NAA38Q9BRA0 125 aaKnown RBP4.94□□□□□ -1.62
HDLBP-228ENST00000459788 MT2AP02795 61 aa4.93□□□□□ -1.62
HDLBP-228ENST00000459788 TMEM254Q8TBM7 123 aa4.93□□□□□ -1.62
HDLBP-228ENST00000459788 C9orf118A6NHY6 69 aa4.92□□□□□ -1.62
HDLBP-228ENST00000459788 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
HDLBP-228ENST00000459788 WFDC13Q8IUB5 93 aa4.9□□□□□ -1.63
HDLBP-228ENST00000459788 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
HDLBP-228ENST00000459788 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
HDLBP-228ENST00000459788 USH2AO75445 5202 aa4.88□□□□□ -1.63
HDLBP-228ENST00000459788 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
HDLBP-228ENST00000459788 MT1FP04733 61 aa4.88□□□□□ -1.63
HDLBP-228ENST00000459788 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
HDLBP-228ENST00000459788 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
HDLBP-228ENST00000459788 BATFQ16520 125 aa4.87□□□□□ -1.63
HDLBP-228ENST00000459788 TAX1BP3O14907 124 aa4.86□□□□□ -1.63
HDLBP-228ENST00000459788 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
HDLBP-228ENST00000459788 K7EQZ3 153 aa4.85□□□□□ -1.63
HDLBP-228ENST00000459788 BPY2O14599 106 aa4.85□□□□□ -1.63
HDLBP-228ENST00000459788 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
HDLBP-228ENST00000459788 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
HDLBP-228ENST00000459788 PCP4L1A6NKN8 68 aa4.83□□□□□ -1.64
HDLBP-228ENST00000459788 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
HDLBP-228ENST00000459788 NDUFS5O43920 106 aa4.81□□□□□ -1.64
HDLBP-228ENST00000459788 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
HDLBP-228ENST00000459788 LINC00846Q9NV44 126 aa4.81□□□□□ -1.64
HDLBP-228ENST00000459788 SPCS1Q9Y6A9 102 aa4.8□□□□□ -1.64
HDLBP-228ENST00000459788 CXCL6P80162 114 aa4.79□□□□□ -1.64
HDLBP-228ENST00000459788 CASC2Q6XLA1 102 aa4.79□□□□□ -1.64
HDLBP-228ENST00000459788 COL5A1-AS1Q5SY13 56 aa4.77□□□□□ -1.65
HDLBP-228ENST00000459788 UBL5Q9BZL1 73 aa4.77□□□□□ -1.65
HDLBP-228ENST00000459788 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
HDLBP-228ENST00000459788 Q5W150 140 aa4.76□□□□□ -1.65
HDLBP-228ENST00000459788 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
HDLBP-228ENST00000459788 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
HDLBP-228ENST00000459788 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
HDLBP-228ENST00000459788 HCG22E2RYF7 251 aa4.74□□□□□ -1.65
HDLBP-228ENST00000459788 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
HDLBP-228ENST00000459788 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
HDLBP-228ENST00000459788 K7EP34 96 aa4.72□□□□□ -1.65
HDLBP-228ENST00000459788 Q8N9L7 120 aa4.72□□□□□ -1.65
HDLBP-228ENST00000459788 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
HDLBP-228ENST00000459788 GTF2H5Q6ZYL4 71 aa4.69□□□□□ -1.66
HDLBP-228ENST00000459788 F8W1H4 67 aa4.68□□□□□ -1.66
HDLBP-228ENST00000459788 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
HDLBP-228ENST00000459788 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
HDLBP-228ENST00000459788 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
HDLBP-228ENST00000459788 A0A1B0GV90 55 aa4.62□□□□□ -1.67
HDLBP-228ENST00000459788 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
HDLBP-228ENST00000459788 S4R3F8 94 aa4.62□□□□□ -1.67
HDLBP-228ENST00000459788 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
HDLBP-228ENST00000459788 ACYP1P07311 99 aa4.6□□□□□ -1.67
HDLBP-228ENST00000459788 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
HDLBP-228ENST00000459788 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms