RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 NDUFS5O43920 106 aa5.28□□□□□ -1.56
HDAC3-202ENST00000459727 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
HDAC3-202ENST00000459727 HUWE1Q7Z6Z7 4374 aaKnown RBP5.27□□□□□ -1.57
HDAC3-202ENST00000459727 PRR4Q16378 134 aa5.26□□□□□ -1.57
HDAC3-202ENST00000459727 STAB2Q8WWQ8 2551 aa5.26□□□□□ -1.57
HDAC3-202ENST00000459727 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
HDAC3-202ENST00000459727 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
HDAC3-202ENST00000459727 TENM2Q9NT68 2774 aa5.25□□□□□ -1.57
HDAC3-202ENST00000459727 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
HDAC3-202ENST00000459727 LY6G6CO95867 125 aa5.24□□□□□ -1.57
HDAC3-202ENST00000459727 COA5Q86WW8 74 aa5.24□□□□□ -1.57
HDAC3-202ENST00000459727 CIRBP-AS1Q8TBR5 109 aa5.22□□□□□ -1.57
HDAC3-202ENST00000459727 FAM229AH3BQW9 127 aa5.21□□□□□ -1.58
HDAC3-202ENST00000459727 Q6ZSA8 131 aa5.21□□□□□ -1.58
HDAC3-202ENST00000459727 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
HDAC3-202ENST00000459727 PSPHP1O15172 72 aa5.19□□□□□ -1.58
HDAC3-202ENST00000459727 PCOTHQ58A44 107 aa5.19□□□□□ -1.58
HDAC3-202ENST00000459727 DNAH10Q8IVF4 4471 aa5.19□□□□□ -1.58
HDAC3-202ENST00000459727 LINC00313P59037 77 aa5.18□□□□□ -1.58
HDAC3-202ENST00000459727 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
HDAC3-202ENST00000459727 Q75L30 129 aa5.18□□□□□ -1.58
HDAC3-202ENST00000459727 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
HDAC3-202ENST00000459727 A8MUN3 132 aa5.16□□□□□ -1.58
HDAC3-202ENST00000459727 ACYP2P14621 99 aa5.16□□□□□ -1.58
HDAC3-202ENST00000459727 Q5VV11 94 aa5.16□□□□□ -1.58
HDAC3-202ENST00000459727 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
HDAC3-202ENST00000459727 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
HDAC3-202ENST00000459727 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
HDAC3-202ENST00000459727 KRTAP13-3Q3SY46 172 aa5.15□□□□□ -1.59
HDAC3-202ENST00000459727 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.59
HDAC3-202ENST00000459727 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
HDAC3-202ENST00000459727 SPINK1P00995 79 aa5.13□□□□□ -1.59
HDAC3-202ENST00000459727 KRTAP10-2P60368 255 aa5.13□□□□□ -1.59
HDAC3-202ENST00000459727 A0A087X002 238 aa5.12□□□□□ -1.59
HDAC3-202ENST00000459727 J3QL48 77 aa5.12□□□□□ -1.59
HDAC3-202ENST00000459727 HRES1P13985 223 aa5.12□□□□□ -1.59
HDAC3-202ENST00000459727 NOTCH2NLQ7Z3S9 236 aa5.12□□□□□ -1.59
HDAC3-202ENST00000459727 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
HDAC3-202ENST00000459727 KIAA1109Q2LD37 5005 aa5.11□□□□□ -1.59
HDAC3-202ENST00000459727 A6NED7 52 aa5.11□□□□□ -1.59
HDAC3-202ENST00000459727 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
HDAC3-202ENST00000459727 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
HDAC3-202ENST00000459727 IGKV2-30P06310 120 aa5.1□□□□□ -1.59
HDAC3-202ENST00000459727 KRTAP10-1P60331 282 aa5.1□□□□□ -1.59
HDAC3-202ENST00000459727 KRTAP13-2Q52LG2 175 aa5.1□□□□□ -1.59
HDAC3-202ENST00000459727 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
HDAC3-202ENST00000459727 Q5W150 140 aa5.09□□□□□ -1.59
HDAC3-202ENST00000459727 ATP11AUNQ6ZP68 121 aa5.09□□□□□ -1.59
HDAC3-202ENST00000459727 PRR26Q8N8Z3 221 aa5.08□□□□□ -1.6
HDAC3-202ENST00000459727 TYMSOSQ8TAI1 123 aa5.08□□□□□ -1.6
HDAC3-202ENST00000459727 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
HDAC3-202ENST00000459727 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
HDAC3-202ENST00000459727 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
HDAC3-202ENST00000459727 PLA2G1BP04054 148 aaKnown RBP5.05□□□□□ -1.6
HDAC3-202ENST00000459727 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
HDAC3-202ENST00000459727 PKHD1P08F94 4074 aa5.05□□□□□ -1.6
HDAC3-202ENST00000459727 VPS13DQ5THJ4 4388 aa5.04□□□□□ -1.6
HDAC3-202ENST00000459727 KRTAP3-3Q9BYR6 98 aa5.04□□□□□ -1.6
HDAC3-202ENST00000459727 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
HDAC3-202ENST00000459727 HERC1Q15751 4861 aa5.04□□□□□ -1.6
HDAC3-202ENST00000459727 DYNC1H1Q14204 4646 aaKnown RBP5.03□□□□□ -1.6
HDAC3-202ENST00000459727 FAT2Q9NYQ8 4349 aa5.03□□□□□ -1.6
HDAC3-202ENST00000459727 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
HDAC3-202ENST00000459727 DNAH6Q9C0G6 4158 aa5.02□□□□□ -1.61
HDAC3-202ENST00000459727 DNAH2Q9P225 4427 aa5.01□□□□□ -1.61
HDAC3-202ENST00000459727 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
HDAC3-202ENST00000459727 DNAH17Q9UFH2 4485 aa5□□□□□ -1.61
HDAC3-202ENST00000459727 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
HDAC3-202ENST00000459727 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
HDAC3-202ENST00000459727 A0A1B0GU69 56 aa4.99□□□□□ -1.61
HDAC3-202ENST00000459727 SPTSSBQ8NFR3 76 aa4.99□□□□□ -1.61
HDAC3-202ENST00000459727 LCA10Q71F78 164 aa4.98□□□□□ -1.61
HDAC3-202ENST00000459727 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
HDAC3-202ENST00000459727 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-202ENST00000459727 HSPG2P98160 4391 aa4.96□□□□□ -1.62
HDAC3-202ENST00000459727 SPINK7P58062 85 aa4.93□□□□□ -1.62
HDAC3-202ENST00000459727 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
HDAC3-202ENST00000459727 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
HDAC3-202ENST00000459727 PKD1P98161 4303 aa4.92□□□□□ -1.62
HDAC3-202ENST00000459727 A6NN06 94 aa4.92□□□□□ -1.62
HDAC3-202ENST00000459727 UQCR11O14957 56 aa4.92□□□□□ -1.62
HDAC3-202ENST00000459727 SEC61GP60059 68 aa4.92□□□□□ -1.62
HDAC3-202ENST00000459727 C20orf166-AS1Q96NR2 134 aa4.92□□□□□ -1.62
HDAC3-202ENST00000459727 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.62
HDAC3-202ENST00000459727 A8MUU9 505 aa4.9□□□□□ -1.63
HDAC3-202ENST00000459727 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
HDAC3-202ENST00000459727 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
HDAC3-202ENST00000459727 A8MU10 97 aa4.87□□□□□ -1.63
HDAC3-202ENST00000459727 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
HDAC3-202ENST00000459727 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
HDAC3-202ENST00000459727 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
HDAC3-202ENST00000459727 DNAH8Q96JB1 4490 aa4.84□□□□□ -1.63
HDAC3-202ENST00000459727 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
HDAC3-202ENST00000459727 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
HDAC3-202ENST00000459727 Q8N1X5 172 aa4.79□□□□□ -1.64
HDAC3-202ENST00000459727 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
HDAC3-202ENST00000459727 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
HDAC3-202ENST00000459727 MYCBP2O75592 4640 aa4.76□□□□□ -1.65
HDAC3-202ENST00000459727 COX6B2Q6YFQ2 88 aa4.75□□□□□ -1.65
HDAC3-202ENST00000459727 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms