RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 KRTAP4-5Q9BYR2 181 aa13.82□□□□□ -0.2
U2AF1-204ENST00000459639 C8orf17Q9NRJ1 99 aa13.82□□□□□ -0.2
U2AF1-204ENST00000459639 KRTAP29-1A8MX34 341 aaPredicted RBP13.82□□□□□ -0.2
U2AF1-204ENST00000459639 LRP1Q07954 4544 aaKnown RBP13.81□□□□□ -0.2
U2AF1-204ENST00000459639 CASC2Q6XLA1 102 aa13.81□□□□□ -0.2
U2AF1-204ENST00000459639 SMIM20Q8N5G0 67 aa13.79□□□□□ -0.2
U2AF1-204ENST00000459639 BIRC6Q9NR09 4857 aa13.79□□□□□ -0.2
U2AF1-204ENST00000459639 OXTP01178 125 aa13.79□□□□□ -0.2
U2AF1-204ENST00000459639 FAT3Q8TDW7 4589 aa13.78□□□□□ -0.2
U2AF1-204ENST00000459639 MT1HL1P0DM35 61 aa13.78□□□□□ -0.2
U2AF1-204ENST00000459639 C8orf87E5RJ46 101 aa13.77□□□□□ -0.21
U2AF1-204ENST00000459639 hDV103S1A0JD37 113 aa13.76□□□□□ -0.21
U2AF1-204ENST00000459639 TNXBP22105 4242 aa13.76□□□□□ -0.21
U2AF1-204ENST00000459639 SERP2Q8N6R1 65 aa13.75□□□□□ -0.21
U2AF1-204ENST00000459639 NOTCH2NLQ7Z3S9 236 aa13.72□□□□□ -0.21
U2AF1-204ENST00000459639 TRAV7A0A075B6U4 112 aa13.72□□□□□ -0.21
U2AF1-204ENST00000459639 OCR1Q9BZK8 76 aa13.71□□□□□ -0.21
U2AF1-204ENST00000459639 TMEM254Q8TBM7 123 aa13.69□□□□□ -0.22
U2AF1-204ENST00000459639 COX7CP15954 63 aa13.68□□□□□ -0.22
U2AF1-204ENST00000459639 LINC00313P59037 77 aa13.68□□□□□ -0.22
U2AF1-204ENST00000459639 MRPL34Q9BQ48 92 aaKnown RBP13.66□□□□□ -0.22
U2AF1-204ENST00000459639 RETNLBQ9BQ08 111 aa13.65□□□□□ -0.22
U2AF1-204ENST00000459639 UQCRQO14949 82 aa13.63□□□□□ -0.23
U2AF1-204ENST00000459639 MYCBP2O75592 4640 aa13.63□□□□□ -0.23
U2AF1-204ENST00000459639 HERC2O95714 4834 aa13.62□□□□□ -0.23
U2AF1-204ENST00000459639 CCDC179H3BU77 68 aa13.57□□□□□ -0.24
U2AF1-204ENST00000459639 DMBT1Q9UGM3 2413 aaPredicted RBP13.56□□□□□ -0.24
U2AF1-204ENST00000459639 KRTAP16-1A8MUX0 517 aa13.56□□□□□ -0.24
U2AF1-204ENST00000459639 FP248Q71RG6 208 aaPredicted RBP13.56□□□□□ -0.24
U2AF1-204ENST00000459639 TP53AIP1Q9HCN2 124 aa13.54□□□□□ -0.24
U2AF1-204ENST00000459639 NDUFS5O43920 106 aa13.53□□□□□ -0.24
U2AF1-204ENST00000459639 Q8N9P0 234 aaPredicted RBP13.5□□□□□ -0.25
U2AF1-204ENST00000459639 C5orf47Q569G3 176 aa13.48□□□□□ -0.25
U2AF1-204ENST00000459639 ABCA13Q86UQ4 5058 aa13.46□□□□□ -0.25
U2AF1-204ENST00000459639 C20orf197Q8N268 126 aa13.46□□□□□ -0.26
U2AF1-204ENST00000459639 C9orf92A6NGG3 77 aa13.44□□□□□ -0.26
U2AF1-204ENST00000459639 TRAV22A0A0B4J277 110 aa13.41□□□□□ -0.26
U2AF1-204ENST00000459639 J3QL48 77 aa13.41□□□□□ -0.26
U2AF1-204ENST00000459639 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
U2AF1-204ENST00000459639 KLKP1Q107X0 134 aa13.4□□□□□ -0.26
U2AF1-204ENST00000459639 H0Y9P7 68 aa13.4□□□□□ -0.26
U2AF1-204ENST00000459639 MP68P56378 58 aa13.4□□□□□ -0.26
U2AF1-204ENST00000459639 A0A0U1RQV1 116 aa13.38□□□□□ -0.27
U2AF1-204ENST00000459639 H3BPC8 53 aa13.35□□□□□ -0.27
U2AF1-204ENST00000459639 SNURFQ9Y675 71 aa13.35□□□□□ -0.27
U2AF1-204ENST00000459639 C20orf166-AS1Q96NR2 134 aa13.33□□□□□ -0.28
U2AF1-204ENST00000459639 A8MUU9 505 aa13.31□□□□□ -0.28
U2AF1-204ENST00000459639 PRR4Q16378 134 aa13.31□□□□□ -0.28
U2AF1-204ENST00000459639 CYSTM1Q9H1C7 97 aa13.31□□□□□ -0.28
U2AF1-204ENST00000459639 KRTAP13-3Q3SY46 172 aa13.31□□□□□ -0.28
U2AF1-204ENST00000459639 Q5W150 140 aa13.31□□□□□ -0.28
U2AF1-204ENST00000459639 ZCCHC13Q8WW36 166 aaKnown RBP13.3□□□□□ -0.28
U2AF1-204ENST00000459639 LINC00208Q96KT6 92 aa13.3□□□□□ -0.28
U2AF1-204ENST00000459639 C1orf64Q8NEQ6 169 aa13.25□□□□□ -0.29
U2AF1-204ENST00000459639 NDUFC1O43677 76 aa13.24□□□□□ -0.29
U2AF1-204ENST00000459639 Q75L30 129 aa13.23□□□□□ -0.29
U2AF1-204ENST00000459639 TPRXLQ17RH7 258 aa13.2□□□□□ -0.3
U2AF1-204ENST00000459639 H7BZZ5 65 aa13.19□□□□□ -0.3
U2AF1-204ENST00000459639 LOC101927531A0A1B0GV80 90 aa13.18□□□□□ -0.3
U2AF1-204ENST00000459639 XP32Q5T750 250 aa13.18□□□□□ -0.3
U2AF1-204ENST00000459639 TMEM258P61165 79 aa13.12□□□□□ -0.31
U2AF1-204ENST00000459639 RPL37P61927 97 aaKnown RBP13.11□□□□□ -0.31
U2AF1-204ENST00000459639 IGKV2-30P06310 120 aa13.09□□□□□ -0.31
U2AF1-204ENST00000459639 CYP4F30PQ9H0H9 118 aa13.07□□□□□ -0.32
U2AF1-204ENST00000459639 ATP11AUNQ6ZP68 121 aa13.02□□□□□ -0.32
U2AF1-204ENST00000459639 PCOTHQ58A44 107 aa13.01□□□□□ -0.33
U2AF1-204ENST00000459639 PCLOQ9Y6V0 5065 aa13□□□□□ -0.33
U2AF1-204ENST00000459639 IGKV2D-30A0A075B6S6 120 aa13□□□□□ -0.33
U2AF1-204ENST00000459639 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
U2AF1-204ENST00000459639 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
U2AF1-204ENST00000459639 C7orf65Q6ZTY9 151 aa12.98□□□□□ -0.33
U2AF1-204ENST00000459639 ATP5EP56381 51 aaPredicted RBP12.96□□□□□ -0.34
U2AF1-204ENST00000459639 SPANXA2-OT1Q8N9U9 137 aa12.95□□□□□ -0.34
U2AF1-204ENST00000459639 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
U2AF1-204ENST00000459639 HRES1P13985 223 aa12.86□□□□□ -0.35
U2AF1-204ENST00000459639 SPINK7P58062 85 aa12.86□□□□□ -0.35
U2AF1-204ENST00000459639 LPAP08519 4548 aa12.81□□□□□ -0.36
U2AF1-204ENST00000459639 LRP2P98164 4655 aa12.75□□□□□ -0.37
U2AF1-204ENST00000459639 SEC61BP60468 96 aaKnown RBP12.74□□□□□ -0.37
U2AF1-204ENST00000459639 SERP1Q9Y6X1 66 aa12.7□□□□□ -0.38
U2AF1-204ENST00000459639 DMAC1Q96GE9 116 aa12.67□□□□□ -0.38
U2AF1-204ENST00000459639 HERC1Q15751 4861 aa12.65□□□□□ -0.38
U2AF1-204ENST00000459639 C4orf26Q17RF5 130 aa12.65□□□□□ -0.38
U2AF1-204ENST00000459639 RPS28P62857 69 aaKnown RBP12.64□□□□□ -0.39
U2AF1-204ENST00000459639 ACYP2P14621 99 aa12.58□□□□□ -0.4
U2AF1-204ENST00000459639 A8MUN3 132 aa12.57□□□□□ -0.4
U2AF1-204ENST00000459639 HMCN2Q8NDA2 5059 aa12.57□□□□□ -0.4
U2AF1-204ENST00000459639 COX6B2Q6YFQ2 88 aa12.54□□□□□ -0.4
U2AF1-204ENST00000459639 COA5Q86WW8 74 aa12.54□□□□□ -0.4
U2AF1-204ENST00000459639 KRTAP3-1Q9BYR8 98 aa12.48□□□□□ -0.41
U2AF1-204ENST00000459639 MUC17Q685J3 4493 aa12.47□□□□□ -0.41
U2AF1-204ENST00000459639 MPLKIPQ8TAP9 179 aa12.45□□□□□ -0.42
U2AF1-204ENST00000459639 KRTAP4-1Q9BYQ7 146 aa12.42□□□□□ -0.42
U2AF1-204ENST00000459639 RBM12B-AS1Q9P1G2 102 aa12.39□□□□□ -0.43
U2AF1-204ENST00000459639 CHKB-CPT1BH3BT56 60 aa12.37□□□□□ -0.43
U2AF1-204ENST00000459639 SMIM26A0A096LP01 95 aa12.35□□□□□ -0.43
U2AF1-204ENST00000459639 H1FX-AS1Q4G0G2 97 aa12.26□□□□□ -0.45
U2AF1-204ENST00000459639 SPTSSBQ8NFR3 76 aa12.17□□□□□ -0.46
U2AF1-204ENST00000459639 S4R3F8 94 aa12.16□□□□□ -0.46
U2AF1-204ENST00000459639 Q1T7F1 81 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms