RNA–Protein interactions for RNA: ENST00000458638.1

PCDH15-220, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-220ENST00000458638 MAP1AP78559 2803 aaPredicted RBP1.3□□□□□ -2.2
PCDH15-220ENST00000458638 QSER1Q2KHR3 1735 aa1.3□□□□□ -2.2
PCDH15-220ENST00000458638 DOPEY2Q9Y3R5 2298 aa1.3□□□□□ -2.2
PCDH15-220ENST00000458638 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
PCDH15-220ENST00000458638 TMEM167BQ9NRX6 74 aa1.3□□□□□ -2.2
PCDH15-220ENST00000458638 APCP25054 2843 aa1.3□□□□□ -2.2
PCDH15-220ENST00000458638 ZNF469Q96JG9 3925 aaPredicted RBP1.3□□□□□ -2.2
PCDH15-220ENST00000458638 PRKDCP78527 4128 aaKnown RBP1.3□□□□□ -2.2
PCDH15-220ENST00000458638 TENM3Q9P273 2699 aa1.3□□□□□ -2.2
PCDH15-220ENST00000458638 HIVEP2P31629 2446 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 PIGYQ3MUY2 71 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 TIMM8BQ9Y5J9 83 aaPredicted RBP1.29□□□□□ -2.2
PCDH15-220ENST00000458638 CADP27708 2225 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 KNTC1P50748 2209 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 ZNF831Q5JPB2 1677 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 DOT1LQ8TEK3 1739 aa1.29□□□□□ -2.2
PCDH15-220ENST00000458638 CCL22O00626 93 aa1.28□□□□□ -2.2
PCDH15-220ENST00000458638 NDUFA3O95167 84 aa1.28□□□□□ -2.2
PCDH15-220ENST00000458638 KRTAP12-1P59990 96 aa1.28□□□□□ -2.2
PCDH15-220ENST00000458638 TECTAO75443 2155 aa1.28□□□□□ -2.2
PCDH15-220ENST00000458638 MGAM2Q2M2H8 2515 aa1.28□□□□□ -2.2
PCDH15-220ENST00000458638 TACC2O95359 2948 aa1.28□□□□□ -2.2
PCDH15-220ENST00000458638 WNK1Q9H4A3 2382 aa1.27□□□□□ -2.21
PCDH15-220ENST00000458638 SPINK4O60575 86 aa1.27□□□□□ -2.21
PCDH15-220ENST00000458638 KRTAP13-1Q8IUC0 172 aa1.27□□□□□ -2.21
PCDH15-220ENST00000458638 CSPG4Q6UVK1 2322 aa1.27□□□□□ -2.21
PCDH15-220ENST00000458638 DDX60LQ5H9U9 1706 aaKnown RBP1.26□□□□□ -2.21
PCDH15-220ENST00000458638 PRB1P04280 392 aa1.26□□□□□ -2.21
PCDH15-220ENST00000458638 TRRAPQ9Y4A5 3859 aa1.26□□□□□ -2.21
PCDH15-220ENST00000458638 NBASA2RRP1 2371 aa1.26□□□□□ -2.21
PCDH15-220ENST00000458638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
PCDH15-220ENST00000458638 CLTCL1P53675 1640 aa1.26□□□□□ -2.21
PCDH15-220ENST00000458638 AHCTF1Q8WYP5 2266 aa1.26□□□□□ -2.21
PCDH15-220ENST00000458638 SSC5DA1L4H1 1573 aa1.25□□□□□ -2.21
PCDH15-220ENST00000458638 K7EQZ3 153 aa1.25□□□□□ -2.21
PCDH15-220ENST00000458638 LINC00158P58513 81 aa1.25□□□□□ -2.21
PCDH15-220ENST00000458638 Q8IZM0 81 aa1.25□□□□□ -2.21
PCDH15-220ENST00000458638 TP53AIP1Q9HCN2 124 aa1.25□□□□□ -2.21
PCDH15-220ENST00000458638 ACANP16112 2415 aa1.25□□□□□ -2.21
PCDH15-220ENST00000458638 SPTBN1Q01082 2364 aaKnown RBP1.25□□□□□ -2.21
PCDH15-220ENST00000458638 CACNA1EQ15878 2313 aa1.24□□□□□ -2.21
PCDH15-220ENST00000458638 SACSQ9NZJ4 4579 aa1.24□□□□□ -2.21
PCDH15-220ENST00000458638 E9PCH4 1651 aa1.24□□□□□ -2.21
PCDH15-220ENST00000458638 CNFNQ9BYD5 112 aa1.24□□□□□ -2.21
PCDH15-220ENST00000458638 LYNX1G3V0Z9 82 aa1.23□□□□□ -2.21
PCDH15-220ENST00000458638 SMIM2Q9BVW6 85 aa1.23□□□□□ -2.21
PCDH15-220ENST00000458638 CDKN2A-AS1Q9UH64 79 aa1.23□□□□□ -2.21
PCDH15-220ENST00000458638 DDX60Q8IY21 1712 aaKnown RBP1.23□□□□□ -2.21
PCDH15-220ENST00000458638 DUOX1Q9NRD9 1551 aa1.22□□□□□ -2.21
PCDH15-220ENST00000458638 CRIP1P50238 77 aa1.22□□□□□ -2.21
PCDH15-220ENST00000458638 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
PCDH15-220ENST00000458638 LINC00308Q8TCZ7 52 aa1.22□□□□□ -2.21
PCDH15-220ENST00000458638 MRPL34Q9BQ48 92 aaKnown RBP1.22□□□□□ -2.21
PCDH15-220ENST00000458638 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
PCDH15-220ENST00000458638 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
PCDH15-220ENST00000458638 APC2O95996 2303 aa1.21□□□□□ -2.22
PCDH15-220ENST00000458638 URB1O60287 2271 aaKnown RBP1.2□□□□□ -2.22
PCDH15-220ENST00000458638 C4AP0C0L4 1744 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 HECTD4Q9Y4D8 3996 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 FLG2Q5D862 2391 aaPredicted RBP1.2□□□□□ -2.22
PCDH15-220ENST00000458638 K7EIL1 84 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 MINOS1Q5TGZ0 78 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 COL6A6A6NMZ7 2263 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 COL7A1Q02388 2944 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 HMCN2Q8NDA2 5059 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 TOGARAM1Q9Y4F4 1720 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 ACACAQ13085 2346 aa1.2□□□□□ -2.22
PCDH15-220ENST00000458638 PLXNB2O15031 1838 aa1.19□□□□□ -2.22
PCDH15-220ENST00000458638 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
PCDH15-220ENST00000458638 CMYA5Q8N3K9 4069 aa1.19□□□□□ -2.22
PCDH15-220ENST00000458638 GOLGA4Q13439 2230 aaKnown RBP1.19□□□□□ -2.22
PCDH15-220ENST00000458638 I3L2K1 104 aa1.19□□□□□ -2.22
PCDH15-220ENST00000458638 NDUFA1O15239 70 aa1.19□□□□□ -2.22
PCDH15-220ENST00000458638 KRTAP12-4P60329 112 aa1.19□□□□□ -2.22
PCDH15-220ENST00000458638 LMO7Q8WWI1 1683 aa1.19□□□□□ -2.22
PCDH15-220ENST00000458638 FRAS1Q86XX4 4008 aa1.18□□□□□ -2.22
PCDH15-220ENST00000458638 TNCP24821 2201 aa1.18□□□□□ -2.22
PCDH15-220ENST00000458638 SPINK9Q5DT21 86 aa1.18□□□□□ -2.22
PCDH15-220ENST00000458638 C6orf48Q9UBA6 75 aa1.18□□□□□ -2.22
PCDH15-220ENST00000458638 DNAH1Q9P2D7 4330 aa1.18□□□□□ -2.22
PCDH15-220ENST00000458638 DYNC2H1Q8NCM8 4307 aaKnown RBP1.18□□□□□ -2.22
PCDH15-220ENST00000458638 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
PCDH15-220ENST00000458638 LYSTQ99698 3801 aa1.17□□□□□ -2.22
PCDH15-220ENST00000458638 COX6A2Q02221 97 aa1.17□□□□□ -2.22
PCDH15-220ENST00000458638 PRO0255Q9UI72 69 aa1.17□□□□□ -2.22
PCDH15-220ENST00000458638 PLCE1Q9P212 2302 aa1.17□□□□□ -2.22
PCDH15-220ENST00000458638 GCC2Q8IWJ2 1684 aa1.16□□□□□ -2.22
PCDH15-220ENST00000458638 KMT2AQ03164 3969 aa1.16□□□□□ -2.22
PCDH15-220ENST00000458638 C4BP0C0L5 1744 aa1.15□□□□□ -2.22
PCDH15-220ENST00000458638 Q5VSD8 79 aa1.15□□□□□ -2.23
PCDH15-220ENST00000458638 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.23
PCDH15-220ENST00000458638 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
PCDH15-220ENST00000458638 SRRM2Q9UQ35 2752 aaKnown RBP1.14□□□□□ -2.23
PCDH15-220ENST00000458638 SSPOA2VEC9 5147 aa1.13□□□□□ -2.23
PCDH15-220ENST00000458638 CNTRLQ7Z7A1 2325 aa1.12□□□□□ -2.23
PCDH15-220ENST00000458638 PKHD1P08F94 4074 aa1.12□□□□□ -2.23
PCDH15-220ENST00000458638 H0YAA0 97 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms