RNA–Protein interactions for RNA: ENST00000458638.1

PCDH15-220, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 448 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-220ENST00000458638 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
PCDH15-220ENST00000458638 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
PCDH15-220ENST00000458638 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
PCDH15-220ENST00000458638 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
PCDH15-220ENST00000458638 FOXD1Q16676 465 aa12.68□□□□□ -0.38
PCDH15-220ENST00000458638 PLPPR3Q6T4P5 718 aa12.54□□□□□ -0.4
PCDH15-220ENST00000458638 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
PCDH15-220ENST00000458638 ADRA2BP18089 450 aa12.06□□□□□ -0.48
PCDH15-220ENST00000458638 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
PCDH15-220ENST00000458638 MSH5O43196 834 aa11.73□□□□□ -0.53
PCDH15-220ENST00000458638 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
PCDH15-220ENST00000458638 SCAF1Q9H7N4 1312 aaKnown RBP11□□□□□ -0.65
PCDH15-220ENST00000458638 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
PCDH15-220ENST00000458638 POTEDQ86YR6 584 aa10.96□□□□□ -0.65
PCDH15-220ENST00000458638 DMRT2Q9Y5R5 561 aa10.88□□□□□ -0.67
PCDH15-220ENST00000458638 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
PCDH15-220ENST00000458638 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
PCDH15-220ENST00000458638 KCNA4P22459 653 aa10.62□□□□□ -0.71
PCDH15-220ENST00000458638 HOXD11P31277 338 aaPredicted RBP10.6□□□□□ -0.71
PCDH15-220ENST00000458638 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
PCDH15-220ENST00000458638 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
PCDH15-220ENST00000458638 DCAF8L1A6NGE4 600 aa10.34□□□□□ -0.75
PCDH15-220ENST00000458638 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
PCDH15-220ENST00000458638 SLC4A1APQ9BWU0 796 aaKnown RBP10.07□□□□□ -0.8
PCDH15-220ENST00000458638 RNF39Q9H2S5 420 aa10.07□□□□□ -0.8
PCDH15-220ENST00000458638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCDH15-220ENST00000458638 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
PCDH15-220ENST00000458638 C1QBPQ07021 282 aaKnown RBP9.92□□□□□ -0.82
PCDH15-220ENST00000458638 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
PCDH15-220ENST00000458638 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
PCDH15-220ENST00000458638 ZBTB22O15209 634 aa9.81□□□□□ -0.84
PCDH15-220ENST00000458638 FOXD4L1Q9NU39 408 aa9.81□□□□□ -0.84
PCDH15-220ENST00000458638 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
PCDH15-220ENST00000458638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
PCDH15-220ENST00000458638 HNRNPUL2Q1KMD3 747 aaKnown RBP9.7□□□□□ -0.86
PCDH15-220ENST00000458638 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
PCDH15-220ENST00000458638 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
PCDH15-220ENST00000458638 APLP2Q06481 763 aa9.62□□□□□ -0.87
PCDH15-220ENST00000458638 CAPN15O75808 1086 aa9.6□□□□□ -0.87
PCDH15-220ENST00000458638 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
PCDH15-220ENST00000458638 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
PCDH15-220ENST00000458638 ZNF219Q9P2Y4 722 aaPredicted RBP9.54□□□□□ -0.88
PCDH15-220ENST00000458638 DSG3P32926 999 aa9.52□□□□□ -0.89
PCDH15-220ENST00000458638 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
PCDH15-220ENST00000458638 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-220ENST00000458638 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
PCDH15-220ENST00000458638 ABCB7O75027 752 aa9.43□□□□□ -0.9
PCDH15-220ENST00000458638 POLA2Q14181 598 aa9.35□□□□□ -0.91
PCDH15-220ENST00000458638 ZBTB12Q9Y330 459 aaPredicted RBP9.19□□□□□ -0.94
PCDH15-220ENST00000458638 MKRN4PQ13434 485 aaPredicted RBP9.11□□□□□ -0.95
PCDH15-220ENST00000458638 FBLN2P98095 1184 aa9.07□□□□□ -0.96
PCDH15-220ENST00000458638 OSCARQ8IYS5 282 aa9.06□□□□□ -0.96
PCDH15-220ENST00000458638 RBM42Q9BTD8 480 aaKnown RBP9.04□□□□□ -0.96
PCDH15-220ENST00000458638 SPDYE2BA6NHP3 402 aa8.95□□□□□ -0.98
PCDH15-220ENST00000458638 SPDYE6P0CI01 402 aa8.95□□□□□ -0.98
PCDH15-220ENST00000458638 SPDYE2Q495Y8 402 aa8.95□□□□□ -0.98
PCDH15-220ENST00000458638 AKT1S1Q96B36 256 aa8.92□□□□□ -0.98
PCDH15-220ENST00000458638 SSUH2Q9Y2M2 353 aa8.89□□□□□ -0.99
PCDH15-220ENST00000458638 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
PCDH15-220ENST00000458638 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
PCDH15-220ENST00000458638 SPDYE4A6NLX3 237 aa8.79□□□□□ -1
PCDH15-220ENST00000458638 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
PCDH15-220ENST00000458638 CHRDL2Q6WN34 429 aa8.74□□□□□ -1.01
PCDH15-220ENST00000458638 PABPN1Q86U42 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
PCDH15-220ENST00000458638 PROM2Q8N271 834 aa8.7□□□□□ -1.02
PCDH15-220ENST00000458638 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
PCDH15-220ENST00000458638 FKBP8Q14318 412 aa8.65□□□□□ -1.02
PCDH15-220ENST00000458638 POTEHQ6S545 545 aa8.64□□□□□ -1.03
PCDH15-220ENST00000458638 CLEC11AQ9Y240 323 aa8.63□□□□□ -1.03
PCDH15-220ENST00000458638 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
PCDH15-220ENST00000458638 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
PCDH15-220ENST00000458638 STAG3Q9UJ98 1225 aa8.56□□□□□ -1.04
PCDH15-220ENST00000458638 PRR29P0C7W0 189 aa8.55□□□□□ -1.04
PCDH15-220ENST00000458638 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
PCDH15-220ENST00000458638 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
PCDH15-220ENST00000458638 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
PCDH15-220ENST00000458638 MNX1P50219 401 aaPredicted RBP8.38□□□□□ -1.07
PCDH15-220ENST00000458638 FBXO3Q9UK99 471 aa8.38□□□□□ -1.07
PCDH15-220ENST00000458638 FARP1Q9Y4F1 1045 aaPredicted RBP8.38□□□□□ -1.07
PCDH15-220ENST00000458638 C19orf67A6NJJ6 358 aa8.33□□□□□ -1.08
PCDH15-220ENST00000458638 HAX1O00165 279 aa8.32□□□□□ -1.08
PCDH15-220ENST00000458638 MIER1Q8N108 512 aa8.32□□□□□ -1.08
PCDH15-220ENST00000458638 VASPP50552 380 aaPredicted RBP8.3□□□□□ -1.08
PCDH15-220ENST00000458638 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
PCDH15-220ENST00000458638 EVX2Q03828 476 aa8.29□□□□□ -1.08
PCDH15-220ENST00000458638 PLEKHG5O94827 1062 aa8.27□□□□□ -1.09
PCDH15-220ENST00000458638 NPM1P06748 294 aaKnown RBP eCLIP8.27□□□□□ -1.09
PCDH15-220ENST00000458638 CD44P16070 742 aaKnown RBP8.24□□□□□ -1.09
PCDH15-220ENST00000458638 SP7Q8TDD2 431 aaPredicted RBP8.24□□□□□ -1.09
PCDH15-220ENST00000458638 ZBTB47Q9UFB7 747 aaPredicted RBP8.22□□□□□ -1.09
PCDH15-220ENST00000458638 NUBP1P53384 320 aa8.18□□□□□ -1.1
PCDH15-220ENST00000458638 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
PCDH15-220ENST00000458638 RASEFQ8IZ41 740 aa8.17□□□□□ -1.1
PCDH15-220ENST00000458638 ZRANB1Q9UGI0 708 aa8.17□□□□□ -1.1
PCDH15-220ENST00000458638 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
PCDH15-220ENST00000458638 PAK3O75914 559 aaPredicted RBP8.14□□□□□ -1.11
PCDH15-220ENST00000458638 KLHL34Q8N239 644 aa8.13□□□□□ -1.11
PCDH15-220ENST00000458638 TSPYL2Q9H2G4 693 aaPredicted RBP8.12□□□□□ -1.11
PCDH15-220ENST00000458638 CCDC61Q9Y6R9 512 aa8.12□□□□□ -1.11
PCDH15-220ENST00000458638 GABBR2O75899 941 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 368.3 ms