RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SETXQ7Z333 2677 aaKnown RBP10.29□□□□□ -0.76
SNX27-204ENST00000458013 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
SNX27-204ENST00000458013 BOD1L1Q8NFC6 3051 aa10.28□□□□□ -0.76
SNX27-204ENST00000458013 MYO15AQ9UKN7 3530 aa10.26□□□□□ -0.77
SNX27-204ENST00000458013 MAP1AP78559 2803 aaPredicted RBP10.26□□□□□ -0.77
SNX27-204ENST00000458013 FRYLO94915 3013 aa10.21□□□□□ -0.78
SNX27-204ENST00000458013 DMXL2Q8TDJ6 3036 aa10.2□□□□□ -0.78
SNX27-204ENST00000458013 P0C880 135 aa10.18□□□□□ -0.78
SNX27-204ENST00000458013 APCP25054 2843 aa10.18□□□□□ -0.78
SNX27-204ENST00000458013 ITPR2Q14571 2701 aa10.17□□□□□ -0.78
SNX27-204ENST00000458013 NOTCH1P46531 2555 aa10.17□□□□□ -0.78
SNX27-204ENST00000458013 STAB2Q8WWQ8 2551 aa10.16□□□□□ -0.78
SNX27-204ENST00000458013 ZNF292O60281 2723 aa10.15□□□□□ -0.78
SNX27-204ENST00000458013 ASH1LQ9NR48 2969 aaKnown RBP10.14□□□□□ -0.79
SNX27-204ENST00000458013 PP632Q6XCG6 107 aa10.13□□□□□ -0.79
SNX27-204ENST00000458013 ATMQ13315 3056 aa10.12□□□□□ -0.79
SNX27-204ENST00000458013 ASPMQ8IZT6 3477 aa10.12□□□□□ -0.79
SNX27-204ENST00000458013 BAHCC1Q9P281 2608 aa10.11□□□□□ -0.79
SNX27-204ENST00000458013 IGSF10Q6WRI0 2623 aa10.11□□□□□ -0.79
SNX27-204ENST00000458013 HIVEP1P15822 2718 aa10.07□□□□□ -0.8
SNX27-204ENST00000458013 TACC2O95359 2948 aa10.07□□□□□ -0.8
SNX27-204ENST00000458013 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
SNX27-204ENST00000458013 ADGRG4Q8IZF6 3080 aa10.06□□□□□ -0.8
SNX27-204ENST00000458013 ZZEF1O43149 2961 aa10.04□□□□□ -0.8
SNX27-204ENST00000458013 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
SNX27-204ENST00000458013 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
SNX27-204ENST00000458013 DCHS1Q96JQ0 3298 aa10.03□□□□□ -0.8
SNX27-204ENST00000458013 WDFY3Q8IZQ1 3526 aa10.02□□□□□ -0.81
SNX27-204ENST00000458013 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
SNX27-204ENST00000458013 UBR5O95071 2799 aaPredicted RBP10.01□□□□□ -0.81
SNX27-204ENST00000458013 COL12A1Q99715 3063 aa10□□□□□ -0.81
SNX27-204ENST00000458013 TPRXLQ17RH7 258 aa9.98□□□□□ -0.81
SNX27-204ENST00000458013 KRTAP13-3Q3SY46 172 aa9.94□□□□□ -0.82
SNX27-204ENST00000458013 ITPR1Q14643 2758 aa9.94□□□□□ -0.82
SNX27-204ENST00000458013 KRTAP12-2P59991 146 aa9.93□□□□□ -0.82
SNX27-204ENST00000458013 PRO2289Q9P1D8 64 aa9.9□□□□□ -0.82
SNX27-204ENST00000458013 KMT2BQ9UMN6 2715 aaPredicted RBP9.84□□□□□ -0.83
SNX27-204ENST00000458013 ZFHX4Q86UP3 3567 aa9.82□□□□□ -0.84
SNX27-204ENST00000458013 LOC400499M0QZD8 3231 aa9.81□□□□□ -0.84
SNX27-204ENST00000458013 KRTAP21-3Q3LHN1 58 aa9.79□□□□□ -0.84
SNX27-204ENST00000458013 CSMD1Q96PZ7 3565 aa9.79□□□□□ -0.84
SNX27-204ENST00000458013 TNRC18O15417 2968 aaPredicted RBP9.66□□□□□ -0.86
SNX27-204ENST00000458013 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.87
SNX27-204ENST00000458013 CELSR2Q9HCU4 2923 aa9.64□□□□□ -0.87
SNX27-204ENST00000458013 LAMA5O15230 3695 aa9.63□□□□□ -0.87
SNX27-204ENST00000458013 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
SNX27-204ENST00000458013 RELNP78509 3460 aa9.6□□□□□ -0.87
SNX27-204ENST00000458013 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
SNX27-204ENST00000458013 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
SNX27-204ENST00000458013 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
SNX27-204ENST00000458013 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
SNX27-204ENST00000458013 FLNCQ14315 2725 aa9.42□□□□□ -0.9
SNX27-204ENST00000458013 KRTAP15-1Q3LI76 137 aa9.42□□□□□ -0.9
SNX27-204ENST00000458013 KRTAP3-1Q9BYR8 98 aa9.4□□□□□ -0.9
SNX27-204ENST00000458013 CELSR1Q9NYQ6 3014 aa9.4□□□□□ -0.9
SNX27-204ENST00000458013 SMG1Q96Q15 3661 aaKnown RBP9.39□□□□□ -0.91
SNX27-204ENST00000458013 TENM4Q6N022 2769 aa9.36□□□□□ -0.91
SNX27-204ENST00000458013 TENM2Q9NT68 2774 aa9.35□□□□□ -0.91
SNX27-204ENST00000458013 FBN2P35556 2912 aa9.35□□□□□ -0.91
SNX27-204ENST00000458013 TGP01266 2768 aa9.35□□□□□ -0.91
SNX27-204ENST00000458013 CRCT1Q9UGL9 99 aa9.32□□□□□ -0.92
SNX27-204ENST00000458013 DMDP11532 3685 aa9.27□□□□□ -0.92
SNX27-204ENST00000458013 ZANQ9Y493 2812 aa9.26□□□□□ -0.93
SNX27-204ENST00000458013 NF1P21359 2839 aa9.25□□□□□ -0.93
SNX27-204ENST00000458013 SVEP1Q4LDE5 3571 aa9.24□□□□□ -0.93
SNX27-204ENST00000458013 TENM1Q9UKZ4 2725 aa9.19□□□□□ -0.94
SNX27-204ENST00000458013 SPENQ96T58 3664 aaKnown RBP9.19□□□□□ -0.94
SNX27-204ENST00000458013 NIPBLQ6KC79 2804 aaeCLIP9.13□□□□□ -0.95
SNX27-204ENST00000458013 ANK3Q12955 4377 aaKnown RBP9.1□□□□□ -0.95
SNX27-204ENST00000458013 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
SNX27-204ENST00000458013 MXRA5Q9NR99 2828 aa9□□□□□ -0.97
SNX27-204ENST00000458013 CUBNO60494 3623 aa8.97□□□□□ -0.97
SNX27-204ENST00000458013 CSMD2Q7Z408 3487 aa8.88□□□□□ -0.99
SNX27-204ENST00000458013 VWFP04275 2813 aa8.88□□□□□ -0.99
SNX27-204ENST00000458013 TENM3Q9P273 2699 aa8.84□□□□□ -1
SNX27-204ENST00000458013 ZFHX3Q15911 3703 aa8.83□□□□□ -1
SNX27-204ENST00000458013 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
SNX27-204ENST00000458013 KRTAP10-12P60413 245 aa8.82□□□□□ -1
SNX27-204ENST00000458013 HUWE1Q7Z6Z7 4374 aaKnown RBP8.8□□□□□ -1
SNX27-204ENST00000458013 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
SNX27-204ENST00000458013 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
SNX27-204ENST00000458013 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.01
SNX27-204ENST00000458013 VPS13CQ709C8 3753 aa8.71□□□□□ -1.02
SNX27-204ENST00000458013 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
SNX27-204ENST00000458013 PDZD2O15018 2839 aa8.67□□□□□ -1.02
SNX27-204ENST00000458013 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
SNX27-204ENST00000458013 TRRAPQ9Y4A5 3859 aa8.67□□□□□ -1.02
SNX27-204ENST00000458013 LCE3AQ5TA76 89 aa8.63□□□□□ -1.03
SNX27-204ENST00000458013 INE1O15225 51 aa8.58□□□□□ -1.04
SNX27-204ENST00000458013 MUC3AQ02505 3323 aa8.55□□□□□ -1.04
SNX27-204ENST00000458013 CSMD3Q7Z407 3707 aa8.55□□□□□ -1.04
SNX27-204ENST00000458013 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
SNX27-204ENST00000458013 KRTAP12-3P60328 96 aa8.53□□□□□ -1.04
SNX27-204ENST00000458013 ALMS1Q8TCU4 4167 aa8.5□□□□□ -1.05
SNX27-204ENST00000458013 AKAP9Q99996 3911 aa8.5□□□□□ -1.05
SNX27-204ENST00000458013 FBN1P35555 2871 aaKnown RBP8.48□□□□□ -1.05
SNX27-204ENST00000458013 MEGF8Q7Z7M0 2845 aa8.42□□□□□ -1.06
SNX27-204ENST00000458013 FBN3Q75N90 2809 aa8.4□□□□□ -1.06
SNX27-204ENST00000458013 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
SNX27-204ENST00000458013 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms