RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C8orf17Q9NRJ1 99 aa10.89□□□□□ -0.67
SEMA3B-209ENST00000456560 FRAS1Q86XX4 4008 aa10.88□□□□□ -0.67
SEMA3B-209ENST00000456560 A0A1B0GVX0 72 aa10.88□□□□□ -0.67
SEMA3B-209ENST00000456560 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
SEMA3B-209ENST00000456560 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
SEMA3B-209ENST00000456560 CIRBP-AS1Q8TBR5 109 aa10.87□□□□□ -0.67
SEMA3B-209ENST00000456560 DNAH5Q8TE73 4624 aa10.85□□□□□ -0.67
SEMA3B-209ENST00000456560 PRR15LQ9BU68 103 aa10.85□□□□□ -0.67
SEMA3B-209ENST00000456560 CHKB-CPT1BH3BT56 60 aa10.84□□□□□ -0.67
SEMA3B-209ENST00000456560 PMAIP1Q13794 54 aa10.84□□□□□ -0.67
SEMA3B-209ENST00000456560 DNAH11Q96DT5 4516 aa10.84□□□□□ -0.67
SEMA3B-209ENST00000456560 IGHV6-1A0A0B4J1U7 121 aa10.84□□□□□ -0.67
SEMA3B-209ENST00000456560 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
SEMA3B-209ENST00000456560 COA5Q86WW8 74 aa10.83□□□□□ -0.68
SEMA3B-209ENST00000456560 TP53AIP1Q9HCN2 124 aa10.83□□□□□ -0.68
SEMA3B-209ENST00000456560 PCOTHQ58A44 107 aa10.82□□□□□ -0.68
SEMA3B-209ENST00000456560 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
SEMA3B-209ENST00000456560 A8MU10 97 aa10.81□□□□□ -0.68
SEMA3B-209ENST00000456560 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
SEMA3B-209ENST00000456560 CD164Q04900 197 aa10.8□□□□□ -0.68
SEMA3B-209ENST00000456560 Q6ZSA8 131 aa10.8□□□□□ -0.68
SEMA3B-209ENST00000456560 FAT2Q9NYQ8 4349 aa10.79□□□□□ -0.68
SEMA3B-209ENST00000456560 SSBP3-AS1Q7Z2R9 100 aa10.79□□□□□ -0.68
SEMA3B-209ENST00000456560 A0A087X002 238 aa10.78□□□□□ -0.68
SEMA3B-209ENST00000456560 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
SEMA3B-209ENST00000456560 RYR2Q92736 4967 aa10.77□□□□□ -0.68
SEMA3B-209ENST00000456560 KRTAP10-1P60331 282 aa10.77□□□□□ -0.68
SEMA3B-209ENST00000456560 MRPL34Q9BQ48 92 aaKnown RBP10.77□□□□□ -0.69
SEMA3B-209ENST00000456560 SEC61GP60059 68 aa10.76□□□□□ -0.69
SEMA3B-209ENST00000456560 NDUFS5O43920 106 aa10.74□□□□□ -0.69
SEMA3B-209ENST00000456560 Q75L30 129 aa10.73□□□□□ -0.69
SEMA3B-209ENST00000456560 SPINK6Q6UWN8 80 aa10.72□□□□□ -0.69
SEMA3B-209ENST00000456560 LOC101927531A0A1B0GV80 90 aa10.71□□□□□ -0.69
SEMA3B-209ENST00000456560 PKD1P98161 4303 aa10.71□□□□□ -0.7
SEMA3B-209ENST00000456560 A6NED7 52 aa10.69□□□□□ -0.7
SEMA3B-209ENST00000456560 KRTAP13-2Q52LG2 175 aa10.69□□□□□ -0.7
SEMA3B-209ENST00000456560 RYR3Q15413 4870 aa10.66□□□□□ -0.7
SEMA3B-209ENST00000456560 LCA10Q71F78 164 aa10.66□□□□□ -0.7
SEMA3B-209ENST00000456560 SPTSSBQ8NFR3 76 aa10.66□□□□□ -0.7
SEMA3B-209ENST00000456560 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.7
SEMA3B-209ENST00000456560 LRP1BQ9NZR2 4599 aa10.64□□□□□ -0.71
SEMA3B-209ENST00000456560 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
SEMA3B-209ENST00000456560 C8orf87E5RJ46 101 aa10.62□□□□□ -0.71
SEMA3B-209ENST00000456560 HRES1P13985 223 aa10.61□□□□□ -0.71
SEMA3B-209ENST00000456560 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
SEMA3B-209ENST00000456560 KRTAP1-4P0C5Y4 121 aa10.61□□□□□ -0.71
SEMA3B-209ENST00000456560 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
SEMA3B-209ENST00000456560 ATP11AUNQ6ZP68 121 aa10.61□□□□□ -0.71
SEMA3B-209ENST00000456560 Q5W150 140 aa10.59□□□□□ -0.71
SEMA3B-209ENST00000456560 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
SEMA3B-209ENST00000456560 LINC00313P59037 77 aa10.53□□□□□ -0.72
SEMA3B-209ENST00000456560 KTN1-AS1Q86SY8 53 aa10.53□□□□□ -0.72
SEMA3B-209ENST00000456560 A6NN06 94 aa10.48□□□□□ -0.73
SEMA3B-209ENST00000456560 SPINK7P58062 85 aa10.48□□□□□ -0.73
SEMA3B-209ENST00000456560 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
SEMA3B-209ENST00000456560 A0A1B0GVY2 172 aa10.48□□□□□ -0.73
SEMA3B-209ENST00000456560 VPS13BQ7Z7G8 4022 aa10.47□□□□□ -0.73
SEMA3B-209ENST00000456560 PLA2G1BP04054 148 aaKnown RBP10.46□□□□□ -0.74
SEMA3B-209ENST00000456560 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
SEMA3B-209ENST00000456560 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
SEMA3B-209ENST00000456560 FAM229AH3BQW9 127 aa10.42□□□□□ -0.74
SEMA3B-209ENST00000456560 TYMSOSQ8TAI1 123 aa10.42□□□□□ -0.74
SEMA3B-209ENST00000456560 ACYP2P14621 99 aa10.4□□□□□ -0.74
SEMA3B-209ENST00000456560 SPINK1P00995 79 aa10.38□□□□□ -0.75
SEMA3B-209ENST00000456560 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
SEMA3B-209ENST00000456560 RBM12B-AS1Q9P1G2 102 aa10.35□□□□□ -0.75
SEMA3B-209ENST00000456560 IGKV2-30P06310 120 aa10.34□□□□□ -0.75
SEMA3B-209ENST00000456560 APOBP04114 4563 aaKnown RBP10.33□□□□□ -0.76
SEMA3B-209ENST00000456560 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
SEMA3B-209ENST00000456560 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
SEMA3B-209ENST00000456560 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
SEMA3B-209ENST00000456560 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
SEMA3B-209ENST00000456560 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
SEMA3B-209ENST00000456560 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
SEMA3B-209ENST00000456560 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SEMA3B-209ENST00000456560 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
SEMA3B-209ENST00000456560 A0A1B0GU69 56 aa10.22□□□□□ -0.77
SEMA3B-209ENST00000456560 IGKV2D-30A0A075B6S6 120 aa10.18□□□□□ -0.78
SEMA3B-209ENST00000456560 HSPG2P98160 4391 aa10.14□□□□□ -0.79
SEMA3B-209ENST00000456560 KIAA1109Q2LD37 5005 aa10.13□□□□□ -0.79
SEMA3B-209ENST00000456560 PKHD1L1Q86WI1 4243 aa10.11□□□□□ -0.79
SEMA3B-209ENST00000456560 RYR1P21817 5038 aa10.1□□□□□ -0.79
SEMA3B-209ENST00000456560 SPATA8Q6RVD6 105 aa10.1□□□□□ -0.79
SEMA3B-209ENST00000456560 MIR22HGQ0VDD5 57 aa10.06□□□□□ -0.8
SEMA3B-209ENST00000456560 UQCR11O14957 56 aa10.05□□□□□ -0.8
SEMA3B-209ENST00000456560 PRAC1Q96KF2 57 aa10.05□□□□□ -0.8
SEMA3B-209ENST00000456560 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
SEMA3B-209ENST00000456560 A8MUU9 505 aa10.03□□□□□ -0.8
SEMA3B-209ENST00000456560 C20orf166-AS1Q96NR2 134 aa10.02□□□□□ -0.81
SEMA3B-209ENST00000456560 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
SEMA3B-209ENST00000456560 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
SEMA3B-209ENST00000456560 Q5VSD8 79 aa9.97□□□□□ -0.81
SEMA3B-209ENST00000456560 Q8N1X5 172 aa9.93□□□□□ -0.82
SEMA3B-209ENST00000456560 FLG2Q5D862 2391 aaPredicted RBP9.86□□□□□ -0.83
SEMA3B-209ENST00000456560 LRP1Q07954 4544 aaKnown RBP9.86□□□□□ -0.83
SEMA3B-209ENST00000456560 BIRC6Q9NR09 4857 aa9.85□□□□□ -0.83
SEMA3B-209ENST00000456560 KRTAP10-8P60410 259 aa9.83□□□□□ -0.84
SEMA3B-209ENST00000456560 KRTAP3-1Q9BYR8 98 aa9.8□□□□□ -0.84
SEMA3B-209ENST00000456560 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
SEMA3B-209ENST00000456560 KRTAP4-5Q9BYR2 181 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms