RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 LINC01558Q9Y6Z2 57 aa10.45□□□□□ -0.74
PTPN6-204ENST00000456013 DNAH8Q96JB1 4490 aa10.45□□□□□ -0.74
PTPN6-204ENST00000456013 HECTD4Q9Y4D8 3996 aa10.44□□□□□ -0.74
PTPN6-204ENST00000456013 HRES1P13985 223 aa10.44□□□□□ -0.74
PTPN6-204ENST00000456013 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
PTPN6-204ENST00000456013 SPAG11AQ6PDA7 123 aa10.41□□□□□ -0.74
PTPN6-204ENST00000456013 A6NED7 52 aa10.4□□□□□ -0.74
PTPN6-204ENST00000456013 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
PTPN6-204ENST00000456013 LCA10Q71F78 164 aa10.4□□□□□ -0.74
PTPN6-204ENST00000456013 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
PTPN6-204ENST00000456013 DNAH17Q9UFH2 4485 aa10.39□□□□□ -0.75
PTPN6-204ENST00000456013 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
PTPN6-204ENST00000456013 Q5W150 140 aa10.38□□□□□ -0.75
PTPN6-204ENST00000456013 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
PTPN6-204ENST00000456013 CIRBP-AS1Q8TBR5 109 aa10.36□□□□□ -0.75
PTPN6-204ENST00000456013 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
PTPN6-204ENST00000456013 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
PTPN6-204ENST00000456013 PRKDCP78527 4128 aaKnown RBP10.34□□□□□ -0.75
PTPN6-204ENST00000456013 C8orf87E5RJ46 101 aa10.33□□□□□ -0.76
PTPN6-204ENST00000456013 SSBP3-AS1Q7Z2R9 100 aa10.33□□□□□ -0.76
PTPN6-204ENST00000456013 SEC61GP60059 68 aa10.31□□□□□ -0.76
PTPN6-204ENST00000456013 SPTSSBQ8NFR3 76 aa10.31□□□□□ -0.76
PTPN6-204ENST00000456013 C1orf134Q5TEV5 83 aa10.31□□□□□ -0.76
PTPN6-204ENST00000456013 DNAH2Q9P225 4427 aa10.3□□□□□ -0.76
PTPN6-204ENST00000456013 FBN3Q75N90 2809 aa10.28□□□□□ -0.76
PTPN6-204ENST00000456013 KMT2AQ03164 3969 aa10.27□□□□□ -0.77
PTPN6-204ENST00000456013 ACYP2P14621 99 aa10.25□□□□□ -0.77
PTPN6-204ENST00000456013 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
PTPN6-204ENST00000456013 SPINK7P58062 85 aa10.24□□□□□ -0.77
PTPN6-204ENST00000456013 LINC00313P59037 77 aa10.23□□□□□ -0.77
PTPN6-204ENST00000456013 A6NN06 94 aa10.22□□□□□ -0.77
PTPN6-204ENST00000456013 KTN1-AS1Q86SY8 53 aa10.22□□□□□ -0.77
PTPN6-204ENST00000456013 FAM229AH3BQW9 127 aa10.21□□□□□ -0.78
PTPN6-204ENST00000456013 DMAC1Q96GE9 116 aa10.2□□□□□ -0.78
PTPN6-204ENST00000456013 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
PTPN6-204ENST00000456013 MEGF8Q7Z7M0 2845 aa10.19□□□□□ -0.78
PTPN6-204ENST00000456013 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
PTPN6-204ENST00000456013 IGKV2-30P06310 120 aa10.15□□□□□ -0.79
PTPN6-204ENST00000456013 TGP01266 2768 aa10.14□□□□□ -0.79
PTPN6-204ENST00000456013 LY6G6CO95867 125 aa10.14□□□□□ -0.79
PTPN6-204ENST00000456013 KRTAP10-2P60368 255 aa10.14□□□□□ -0.79
PTPN6-204ENST00000456013 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
PTPN6-204ENST00000456013 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
PTPN6-204ENST00000456013 DNAH11Q96DT5 4516 aa10.11□□□□□ -0.79
PTPN6-204ENST00000456013 DNAH5Q8TE73 4624 aa10.07□□□□□ -0.8
PTPN6-204ENST00000456013 DNAH6Q9C0G6 4158 aa10.07□□□□□ -0.8
PTPN6-204ENST00000456013 Q6ZSA8 131 aa10.07□□□□□ -0.8
PTPN6-204ENST00000456013 C7orf65Q6ZTY9 151 aa10.03□□□□□ -0.8
PTPN6-204ENST00000456013 KRTAP1-4P0C5Y4 121 aa10.02□□□□□ -0.8
PTPN6-204ENST00000456013 KRTAP10-1P60331 282 aa10.02□□□□□ -0.81
PTPN6-204ENST00000456013 A0A1B0GU69 56 aa10.01□□□□□ -0.81
PTPN6-204ENST00000456013 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
PTPN6-204ENST00000456013 IGKV2D-30A0A075B6S6 120 aa9.96□□□□□ -0.82
PTPN6-204ENST00000456013 LRP1BQ9NZR2 4599 aa9.94□□□□□ -0.82
PTPN6-204ENST00000456013 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
PTPN6-204ENST00000456013 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
PTPN6-204ENST00000456013 PKD1P98161 4303 aa9.91□□□□□ -0.82
PTPN6-204ENST00000456013 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
PTPN6-204ENST00000456013 TYMSOSQ8TAI1 123 aa9.89□□□□□ -0.83
PTPN6-204ENST00000456013 SPINK1P00995 79 aa9.89□□□□□ -0.83
PTPN6-204ENST00000456013 UQCR11O14957 56 aa9.86□□□□□ -0.83
PTPN6-204ENST00000456013 MIR22HGQ0VDD5 57 aa9.84□□□□□ -0.83
PTPN6-204ENST00000456013 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
PTPN6-204ENST00000456013 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
PTPN6-204ENST00000456013 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
PTPN6-204ENST00000456013 HYDINQ4G0P3 5121 aa9.75□□□□□ -0.85
PTPN6-204ENST00000456013 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
PTPN6-204ENST00000456013 Q8N1X5 172 aa9.73□□□□□ -0.85
PTPN6-204ENST00000456013 DNHD1Q96M86 4753 aa9.72□□□□□ -0.85
PTPN6-204ENST00000456013 PRAC1Q96KF2 57 aa9.71□□□□□ -0.85
PTPN6-204ENST00000456013 ADM2Q7Z4H4 148 aa9.69□□□□□ -0.86
PTPN6-204ENST00000456013 SACSQ9NZJ4 4579 aa9.63□□□□□ -0.87
PTPN6-204ENST00000456013 A8MUU9 505 aa9.61□□□□□ -0.87
PTPN6-204ENST00000456013 KRTAP21-3Q3LHN1 58 aa9.61□□□□□ -0.87
PTPN6-204ENST00000456013 C20orf166-AS1Q96NR2 134 aa9.61□□□□□ -0.87
PTPN6-204ENST00000456013 C9orf92A6NGG3 77 aa9.57□□□□□ -0.88
PTPN6-204ENST00000456013 SMR3BP02814 79 aaPredicted RBP9.53□□□□□ -0.88
PTPN6-204ENST00000456013 KRTAP3-1Q9BYR8 98 aa9.53□□□□□ -0.88
PTPN6-204ENST00000456013 PKHD1P08F94 4074 aa9.5□□□□□ -0.89
PTPN6-204ENST00000456013 H0YAA0 97 aa9.49□□□□□ -0.89
PTPN6-204ENST00000456013 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
PTPN6-204ENST00000456013 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
PTPN6-204ENST00000456013 PKHD1L1Q86WI1 4243 aa9.46□□□□□ -0.9
PTPN6-204ENST00000456013 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
PTPN6-204ENST00000456013 A0A1B0GU33 70 aa9.43□□□□□ -0.9
PTPN6-204ENST00000456013 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
PTPN6-204ENST00000456013 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.9
PTPN6-204ENST00000456013 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.9
PTPN6-204ENST00000456013 A0A1B0GVY2 172 aa9.38□□□□□ -0.91
PTPN6-204ENST00000456013 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
PTPN6-204ENST00000456013 FAT1Q14517 4588 aa9.33□□□□□ -0.92
PTPN6-204ENST00000456013 FLG2Q5D862 2391 aaPredicted RBP9.25□□□□□ -0.93
PTPN6-204ENST00000456013 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
PTPN6-204ENST00000456013 K7ERS5 55 aa9.17□□□□□ -0.94
PTPN6-204ENST00000456013 FAT3Q8TDW7 4589 aa9.13□□□□□ -0.95
PTPN6-204ENST00000456013 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
PTPN6-204ENST00000456013 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
PTPN6-204ENST00000456013 RPL37P61927 97 aaKnown RBP9.1□□□□□ -0.95
PTPN6-204ENST00000456013 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
PTPN6-204ENST00000456013 TNXBP22105 4242 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms