RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
CCDC90B-202ENST00000455220 KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
CCDC90B-202ENST00000455220 LRP2P98164 4655 aa9.15□□□□□ -0.94
CCDC90B-202ENST00000455220 IGKV3D-7A0A0C4DH55 119 aa9.15□□□□□ -0.95
CCDC90B-202ENST00000455220 A0A1B0GVX0 72 aa9.15□□□□□ -0.95
CCDC90B-202ENST00000455220 CXCL6P80162 114 aa9.15□□□□□ -0.95
CCDC90B-202ENST00000455220 NDUFB1O75438 58 aa9.14□□□□□ -0.95
CCDC90B-202ENST00000455220 LINC00643Q86TS7 51 aa9.14□□□□□ -0.95
CCDC90B-202ENST00000455220 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
CCDC90B-202ENST00000455220 PRR15Q8IV56 129 aa9.13□□□□□ -0.95
CCDC90B-202ENST00000455220 ATP5EP2Q5VTU8 51 aa9.12□□□□□ -0.95
CCDC90B-202ENST00000455220 IGHV6-1A0A0B4J1U7 121 aa9.12□□□□□ -0.95
CCDC90B-202ENST00000455220 K7EQZ3 153 aa9.12□□□□□ -0.95
CCDC90B-202ENST00000455220 UBR4Q5T4S7 5183 aa9.11□□□□□ -0.95
CCDC90B-202ENST00000455220 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
CCDC90B-202ENST00000455220 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
CCDC90B-202ENST00000455220 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
CCDC90B-202ENST00000455220 Q8N9L7 120 aa9.08□□□□□ -0.96
CCDC90B-202ENST00000455220 LINC00313P59037 77 aa9.07□□□□□ -0.96
CCDC90B-202ENST00000455220 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
CCDC90B-202ENST00000455220 XP32Q5T750 250 aa9.04□□□□□ -0.96
CCDC90B-202ENST00000455220 MMP24-AS1A0A0U1RRL7 71 aa9.03□□□□□ -0.96
CCDC90B-202ENST00000455220 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
CCDC90B-202ENST00000455220 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
CCDC90B-202ENST00000455220 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
CCDC90B-202ENST00000455220 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
CCDC90B-202ENST00000455220 HCG22E2RYF7 251 aa8.96□□□□□ -0.97
CCDC90B-202ENST00000455220 HIST1H4AP62805 103 aaKnown RBP8.96□□□□□ -0.97
CCDC90B-202ENST00000455220 TMEM254Q8TBM7 123 aa8.96□□□□□ -0.97
CCDC90B-202ENST00000455220 A8MUU9 505 aa8.95□□□□□ -0.98
CCDC90B-202ENST00000455220 Q75L30 129 aa8.95□□□□□ -0.98
CCDC90B-202ENST00000455220 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
CCDC90B-202ENST00000455220 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
CCDC90B-202ENST00000455220 CASC2Q6XLA1 102 aa8.94□□□□□ -0.98
CCDC90B-202ENST00000455220 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
CCDC90B-202ENST00000455220 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
CCDC90B-202ENST00000455220 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
CCDC90B-202ENST00000455220 A0A087WVE0 104 aa8.91□□□□□ -0.98
CCDC90B-202ENST00000455220 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
CCDC90B-202ENST00000455220 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
CCDC90B-202ENST00000455220 RNF213Q63HN8 5207 aa8.83□□□□□ -1
CCDC90B-202ENST00000455220 NDUFS5O43920 106 aa8.82□□□□□ -1
CCDC90B-202ENST00000455220 ATP11AUNQ6ZP68 121 aa8.82□□□□□ -1
CCDC90B-202ENST00000455220 PCOTHQ58A44 107 aa8.81□□□□□ -1
CCDC90B-202ENST00000455220 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
CCDC90B-202ENST00000455220 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
CCDC90B-202ENST00000455220 MUC2Q02817 5179 aa8.73□□□□□ -1.01
CCDC90B-202ENST00000455220 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
CCDC90B-202ENST00000455220 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
CCDC90B-202ENST00000455220 Q5W150 140 aa8.72□□□□□ -1.01
CCDC90B-202ENST00000455220 OCR1Q9BZK8 76 aa8.7□□□□□ -1.02
CCDC90B-202ENST00000455220 SCGB1A1P11684 91 aa8.69□□□□□ -1.02
CCDC90B-202ENST00000455220 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
CCDC90B-202ENST00000455220 UQCRQO14949 82 aa8.68□□□□□ -1.02
CCDC90B-202ENST00000455220 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
CCDC90B-202ENST00000455220 ATOX1O00244 68 aa8.62□□□□□ -1.03
CCDC90B-202ENST00000455220 SMIM20Q8N5G0 67 aa8.61□□□□□ -1.03
CCDC90B-202ENST00000455220 SPINK7P58062 85 aa8.59□□□□□ -1.03
CCDC90B-202ENST00000455220 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
CCDC90B-202ENST00000455220 H0Y9P7 68 aa8.57□□□□□ -1.04
CCDC90B-202ENST00000455220 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
CCDC90B-202ENST00000455220 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
CCDC90B-202ENST00000455220 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
CCDC90B-202ENST00000455220 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
CCDC90B-202ENST00000455220 LOC101927531A0A1B0GV80 90 aa8.52□□□□□ -1.04
CCDC90B-202ENST00000455220 MP68P56378 58 aa8.52□□□□□ -1.04
CCDC90B-202ENST00000455220 HRES1P13985 223 aa8.52□□□□□ -1.05
CCDC90B-202ENST00000455220 H3BPC8 53 aa8.5□□□□□ -1.05
CCDC90B-202ENST00000455220 SERP2Q8N6R1 65 aa8.5□□□□□ -1.05
CCDC90B-202ENST00000455220 FAT4Q6V0I7 4981 aa8.5□□□□□ -1.05
CCDC90B-202ENST00000455220 C1orf64Q8NEQ6 169 aa8.48□□□□□ -1.05
CCDC90B-202ENST00000455220 LINC00208Q96KT6 92 aa8.48□□□□□ -1.05
CCDC90B-202ENST00000455220 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
CCDC90B-202ENST00000455220 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
CCDC90B-202ENST00000455220 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
CCDC90B-202ENST00000455220 A0A0U1RQV1 116 aa8.41□□□□□ -1.06
CCDC90B-202ENST00000455220 COX7CP15954 63 aa8.4□□□□□ -1.06
CCDC90B-202ENST00000455220 RBM12B-AS1Q9P1G2 102 aa8.4□□□□□ -1.06
CCDC90B-202ENST00000455220 ANAPC13Q9BS18 74 aa8.39□□□□□ -1.07
CCDC90B-202ENST00000455220 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
CCDC90B-202ENST00000455220 C20orf197Q8N268 126 aa8.36□□□□□ -1.07
CCDC90B-202ENST00000455220 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
CCDC90B-202ENST00000455220 FLGP20930 4061 aaPredicted RBP8.35□□□□□ -1.07
CCDC90B-202ENST00000455220 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
CCDC90B-202ENST00000455220 SNURFQ9Y675 71 aa8.33□□□□□ -1.08
CCDC90B-202ENST00000455220 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
CCDC90B-202ENST00000455220 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
CCDC90B-202ENST00000455220 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
CCDC90B-202ENST00000455220 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
CCDC90B-202ENST00000455220 LCE2BO14633 110 aa8.27□□□□□ -1.09
CCDC90B-202ENST00000455220 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
CCDC90B-202ENST00000455220 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
CCDC90B-202ENST00000455220 MT1HP80294 61 aa8.2□□□□□ -1.1
CCDC90B-202ENST00000455220 CYSTM1Q9H1C7 97 aa8.2□□□□□ -1.1
CCDC90B-202ENST00000455220 A8MUN3 132 aa8.18□□□□□ -1.1
CCDC90B-202ENST00000455220 NDUFC1O43677 76 aa8.18□□□□□ -1.1
CCDC90B-202ENST00000455220 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
CCDC90B-202ENST00000455220 SPANXA2-OT1Q8N9U9 137 aa8.17□□□□□ -1.1
CCDC90B-202ENST00000455220 H7BZZ5 65 aa8.16□□□□□ -1.1
CCDC90B-202ENST00000455220 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms