RNA–Protein interactions for RNA: ENST00000454349.6

TNRC6B-206, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNRC6B, Length 18,279 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-206ENST00000454349 NOTCH1P46531 2555 aa3.01□□□□□ -1.93
TNRC6B-206ENST00000454349 Q6ZRN7 208 aaPredicted RBP3□□□□□ -1.93
TNRC6B-206ENST00000454349 RELNP78509 3460 aa3□□□□□ -1.93
TNRC6B-206ENST00000454349 NBEAL2Q6ZNJ1 2754 aa3□□□□□ -1.93
TNRC6B-206ENST00000454349 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
TNRC6B-206ENST00000454349 COL6A5A8TX70 2615 aa2.99□□□□□ -1.93
TNRC6B-206ENST00000454349 MUC3AQ02505 3323 aa2.99□□□□□ -1.93
TNRC6B-206ENST00000454349 KRTAP1-3Q8IUG1 177 aa2.98□□□□□ -1.93
TNRC6B-206ENST00000454349 NBEAL1Q6ZS30 2694 aa2.98□□□□□ -1.93
TNRC6B-206ENST00000454349 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
TNRC6B-206ENST00000454349 TEP1Q99973 2627 aaKnown RBP2.97□□□□□ -1.93
TNRC6B-206ENST00000454349 UNC79Q9P2D8 2635 aa2.96□□□□□ -1.93
TNRC6B-206ENST00000454349 ITPR3Q14573 2671 aa2.95□□□□□ -1.94
TNRC6B-206ENST00000454349 SPENQ96T58 3664 aaKnown RBP2.95□□□□□ -1.94
TNRC6B-206ENST00000454349 HELZ2Q9BYK8 2649 aaKnown RBP2.95□□□□□ -1.94
TNRC6B-206ENST00000454349 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
TNRC6B-206ENST00000454349 KRTAP1-1Q07627 177 aa2.92□□□□□ -1.94
TNRC6B-206ENST00000454349 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
TNRC6B-206ENST00000454349 H0YAA0 97 aa2.92□□□□□ -1.94
TNRC6B-206ENST00000454349 Q5VSD8 79 aa2.91□□□□□ -1.94
TNRC6B-206ENST00000454349 IGSF10Q6WRI0 2623 aa2.91□□□□□ -1.94
TNRC6B-206ENST00000454349 ZNF292O60281 2723 aa2.91□□□□□ -1.94
TNRC6B-206ENST00000454349 UTP20O75691 2785 aaKnown RBP2.9□□□□□ -1.94
TNRC6B-206ENST00000454349 ITPR1Q14643 2758 aa2.9□□□□□ -1.94
TNRC6B-206ENST00000454349 CUBNO60494 3623 aa2.9□□□□□ -1.94
TNRC6B-206ENST00000454349 CELSR2Q9HCU4 2923 aa2.89□□□□□ -1.95
TNRC6B-206ENST00000454349 TEX15Q9BXT5 2789 aa2.88□□□□□ -1.95
TNRC6B-206ENST00000454349 SETXQ7Z333 2677 aaKnown RBP2.87□□□□□ -1.95
TNRC6B-206ENST00000454349 CFAP46Q8IYW2 2715 aa2.87□□□□□ -1.95
TNRC6B-206ENST00000454349 FBN2P35556 2912 aa2.86□□□□□ -1.95
TNRC6B-206ENST00000454349 A8MU10 97 aa2.85□□□□□ -1.95
TNRC6B-206ENST00000454349 UBR5O95071 2799 aaPredicted RBP2.85□□□□□ -1.95
TNRC6B-206ENST00000454349 TPRXLQ17RH7 258 aa2.85□□□□□ -1.95
TNRC6B-206ENST00000454349 CELSR1Q9NYQ6 3014 aa2.84□□□□□ -1.95
TNRC6B-206ENST00000454349 BSNQ9UPA5 3926 aa2.84□□□□□ -1.95
TNRC6B-206ENST00000454349 FLNAP21333 2647 aaKnown RBP2.84□□□□□ -1.96
TNRC6B-206ENST00000454349 ZANQ9Y493 2812 aa2.84□□□□□ -1.96
TNRC6B-206ENST00000454349 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
TNRC6B-206ENST00000454349 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
TNRC6B-206ENST00000454349 CRYBG3Q68DQ2 2970 aa2.82□□□□□ -1.96
TNRC6B-206ENST00000454349 DCHS2Q6V1P9 2916 aa2.82□□□□□ -1.96
TNRC6B-206ENST00000454349 KRTAP7-1Q8IUC3 87 aa2.81□□□□□ -1.96
TNRC6B-206ENST00000454349 NSD1Q96L73 2696 aaPredicted RBP2.8□□□□□ -1.96
TNRC6B-206ENST00000454349 KMT2BQ9UMN6 2715 aaPredicted RBP2.8□□□□□ -1.96
TNRC6B-206ENST00000454349 KRTAP1-5Q9BYS1 174 aa2.8□□□□□ -1.96
TNRC6B-206ENST00000454349 GCN1Q92616 2671 aaKnown RBP2.79□□□□□ -1.96
TNRC6B-206ENST00000454349 KRTAP13-2Q52LG2 175 aa2.78□□□□□ -1.96
TNRC6B-206ENST00000454349 NF1P21359 2839 aa2.77□□□□□ -1.97
TNRC6B-206ENST00000454349 HIVEP1P15822 2718 aa2.76□□□□□ -1.97
TNRC6B-206ENST00000454349 FLNCQ14315 2725 aa2.76□□□□□ -1.97
TNRC6B-206ENST00000454349 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
TNRC6B-206ENST00000454349 KRTAP21-3Q3LHN1 58 aa2.75□□□□□ -1.97
TNRC6B-206ENST00000454349 HRNRQ86YZ3 2850 aaPredicted RBP2.74□□□□□ -1.97
TNRC6B-206ENST00000454349 KRTAP10-1P60331 282 aa2.74□□□□□ -1.97
TNRC6B-206ENST00000454349 ZFHX3Q15911 3703 aa2.73□□□□□ -1.97
TNRC6B-206ENST00000454349 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
TNRC6B-206ENST00000454349 APCP25054 2843 aa2.73□□□□□ -1.97
TNRC6B-206ENST00000454349 VPS13CQ709C8 3753 aa2.72□□□□□ -1.97
TNRC6B-206ENST00000454349 NBPF19A0A087WUL8 3843 aa2.72□□□□□ -1.97
TNRC6B-206ENST00000454349 XP32Q5T750 250 aa2.72□□□□□ -1.97
TNRC6B-206ENST00000454349 MXRA5Q9NR99 2828 aa2.72□□□□□ -1.97
TNRC6B-206ENST00000454349 KRTAP10-2P60368 255 aa2.71□□□□□ -1.98
TNRC6B-206ENST00000454349 TENM3Q9P273 2699 aa2.71□□□□□ -1.98
TNRC6B-206ENST00000454349 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
TNRC6B-206ENST00000454349 CSMD2Q7Z408 3487 aa2.7□□□□□ -1.98
TNRC6B-206ENST00000454349 ITPR2Q14571 2701 aa2.69□□□□□ -1.98
TNRC6B-206ENST00000454349 TRRAPQ9Y4A5 3859 aa2.69□□□□□ -1.98
TNRC6B-206ENST00000454349 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
TNRC6B-206ENST00000454349 PDZD2O15018 2839 aa2.66□□□□□ -1.98
TNRC6B-206ENST00000454349 NIPBLQ6KC79 2804 aaeCLIP2.64□□□□□ -1.99
TNRC6B-206ENST00000454349 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
TNRC6B-206ENST00000454349 KRTAP1-4P0C5Y4 121 aa2.63□□□□□ -1.99
TNRC6B-206ENST00000454349 KRTAP19-4Q3LI73 84 aa2.63□□□□□ -1.99
TNRC6B-206ENST00000454349 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
TNRC6B-206ENST00000454349 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
TNRC6B-206ENST00000454349 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
TNRC6B-206ENST00000454349 AKAP9Q99996 3911 aa2.61□□□□□ -1.99
TNRC6B-206ENST00000454349 CSMD3Q7Z407 3707 aa2.61□□□□□ -1.99
TNRC6B-206ENST00000454349 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
TNRC6B-206ENST00000454349 SRRM2Q9UQ35 2752 aaKnown RBP2.57□□□□□ -2
TNRC6B-206ENST00000454349 VWFP04275 2813 aa2.56□□□□□ -2
TNRC6B-206ENST00000454349 CMYA5Q8N3K9 4069 aa2.55□□□□□ -2
TNRC6B-206ENST00000454349 KRTAP10-10P60014 251 aa2.55□□□□□ -2
TNRC6B-206ENST00000454349 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
TNRC6B-206ENST00000454349 PKD1L1Q8TDX9 2849 aa2.53□□□□□ -2
TNRC6B-206ENST00000454349 FBN1P35555 2871 aaKnown RBP2.52□□□□□ -2.01
TNRC6B-206ENST00000454349 DNAH1Q9P2D7 4330 aa2.51□□□□□ -2.01
TNRC6B-206ENST00000454349 MT3P25713 68 aa2.5□□□□□ -2.01
TNRC6B-206ENST00000454349 FRAS1Q86XX4 4008 aa2.5□□□□□ -2.01
TNRC6B-206ENST00000454349 DNAH2Q9P225 4427 aa2.5□□□□□ -2.01
TNRC6B-206ENST00000454349 TENM1Q9UKZ4 2725 aa2.49□□□□□ -2.01
TNRC6B-206ENST00000454349 DNAH11Q96DT5 4516 aa2.48□□□□□ -2.01
TNRC6B-206ENST00000454349 TENM2Q9NT68 2774 aa2.46□□□□□ -2.02
TNRC6B-206ENST00000454349 TGP01266 2768 aa2.45□□□□□ -2.02
TNRC6B-206ENST00000454349 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
TNRC6B-206ENST00000454349 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
TNRC6B-206ENST00000454349 DNAH3Q8TD57 4116 aa2.43□□□□□ -2.02
TNRC6B-206ENST00000454349 FBN3Q75N90 2809 aa2.43□□□□□ -2.02
TNRC6B-206ENST00000454349 COL7A1Q02388 2944 aa2.42□□□□□ -2.02
TNRC6B-206ENST00000454349 KRTAP3-1Q9BYR8 98 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms