RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 A0A087WVE0 104 aa3.41□□□□□ -1.86
SDC4P-201ENST00000453285 J3KT08 172 aa3.41□□□□□ -1.86
SDC4P-201ENST00000453285 K7EQZ3 153 aa3.41□□□□□ -1.86
SDC4P-201ENST00000453285 LIMD2Q9BT23 127 aa3.41□□□□□ -1.86
SDC4P-201ENST00000453285 A8MWP4 228 aa3.4□□□□□ -1.87
SDC4P-201ENST00000453285 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
SDC4P-201ENST00000453285 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
SDC4P-201ENST00000453285 MYCBP2O75592 4640 aa3.4□□□□□ -1.87
SDC4P-201ENST00000453285 OXTP01178 125 aa3.39□□□□□ -1.87
SDC4P-201ENST00000453285 PRR15Q8IV56 129 aa3.39□□□□□ -1.87
SDC4P-201ENST00000453285 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
SDC4P-201ENST00000453285 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
SDC4P-201ENST00000453285 FAM236AA0A1B0GUQ0 79 aa3.37□□□□□ -1.87
SDC4P-201ENST00000453285 FAM236BA0A1B0GV22 79 aa3.37□□□□□ -1.87
SDC4P-201ENST00000453285 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
SDC4P-201ENST00000453285 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
SDC4P-201ENST00000453285 MMP24-AS1A0A0U1RRL7 71 aa3.36□□□□□ -1.87
SDC4P-201ENST00000453285 NDUFB1O75438 58 aa3.36□□□□□ -1.87
SDC4P-201ENST00000453285 IGHV6-1A0A0B4J1U7 121 aa3.35□□□□□ -1.87
SDC4P-201ENST00000453285 HCG22E2RYF7 251 aa3.35□□□□□ -1.87
SDC4P-201ENST00000453285 C8orf17Q9NRJ1 99 aa3.35□□□□□ -1.87
SDC4P-201ENST00000453285 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.87
SDC4P-201ENST00000453285 WFDC13Q8IUB5 93 aa3.34□□□□□ -1.87
SDC4P-201ENST00000453285 RETNLBQ9BQ08 111 aa3.34□□□□□ -1.87
SDC4P-201ENST00000453285 KRTAP16-1A8MUX0 517 aa3.33□□□□□ -1.88
SDC4P-201ENST00000453285 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
SDC4P-201ENST00000453285 LINC00313P59037 77 aa3.33□□□□□ -1.88
SDC4P-201ENST00000453285 CASC2Q6XLA1 102 aa3.33□□□□□ -1.88
SDC4P-201ENST00000453285 hDV103S1A0JD37 113 aa3.32□□□□□ -1.88
SDC4P-201ENST00000453285 ATOX1O00244 68 aa3.32□□□□□ -1.88
SDC4P-201ENST00000453285 TMEM254Q8TBM7 123 aa3.32□□□□□ -1.88
SDC4P-201ENST00000453285 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
SDC4P-201ENST00000453285 MRPL34Q9BQ48 92 aaKnown RBP3.31□□□□□ -1.88
SDC4P-201ENST00000453285 OCR1Q9BZK8 76 aa3.31□□□□□ -1.88
SDC4P-201ENST00000453285 LORP23490 312 aaPredicted RBP3.3□□□□□ -1.88
SDC4P-201ENST00000453285 TRAV7A0A075B6U4 112 aa3.29□□□□□ -1.88
SDC4P-201ENST00000453285 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
SDC4P-201ENST00000453285 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
SDC4P-201ENST00000453285 ANAPC13Q9BS18 74 aa3.29□□□□□ -1.88
SDC4P-201ENST00000453285 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
SDC4P-201ENST00000453285 C9orf92A6NGG3 77 aa3.28□□□□□ -1.88
SDC4P-201ENST00000453285 PCP4P48539 62 aa3.28□□□□□ -1.88
SDC4P-201ENST00000453285 SMIM20Q8N5G0 67 aa3.28□□□□□ -1.88
SDC4P-201ENST00000453285 COX7CP15954 63 aa3.27□□□□□ -1.89
SDC4P-201ENST00000453285 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
SDC4P-201ENST00000453285 A8MUU9 505 aa3.26□□□□□ -1.89
SDC4P-201ENST00000453285 UQCRQO14949 82 aa3.26□□□□□ -1.89
SDC4P-201ENST00000453285 C20orf166-AS1Q96NR2 134 aa3.26□□□□□ -1.89
SDC4P-201ENST00000453285 TP53AIP1Q9HCN2 124 aa3.26□□□□□ -1.89
SDC4P-201ENST00000453285 CCDC179H3BU77 68 aa3.25□□□□□ -1.89
SDC4P-201ENST00000453285 NDUFS5O43920 106 aa3.25□□□□□ -1.89
SDC4P-201ENST00000453285 PRR4Q16378 134 aa3.25□□□□□ -1.89
SDC4P-201ENST00000453285 Q5W150 140 aa3.25□□□□□ -1.89
SDC4P-201ENST00000453285 MUC2Q02817 5179 aa3.25□□□□□ -1.89
SDC4P-201ENST00000453285 C5orf47Q569G3 176 aa3.24□□□□□ -1.89
SDC4P-201ENST00000453285 TPRXLQ17RH7 258 aa3.23□□□□□ -1.89
SDC4P-201ENST00000453285 XP32Q5T750 250 aa3.23□□□□□ -1.89
SDC4P-201ENST00000453285 Q75L30 129 aa3.23□□□□□ -1.89
SDC4P-201ENST00000453285 ZCCHC13Q8WW36 166 aaKnown RBP3.23□□□□□ -1.89
SDC4P-201ENST00000453285 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
SDC4P-201ENST00000453285 A0A0U1RQV1 116 aa3.22□□□□□ -1.89
SDC4P-201ENST00000453285 H0Y9P7 68 aa3.22□□□□□ -1.89
SDC4P-201ENST00000453285 C20orf197Q8N268 126 aa3.22□□□□□ -1.89
SDC4P-201ENST00000453285 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
SDC4P-201ENST00000453285 LPAP08519 4548 aa3.21□□□□□ -1.89
SDC4P-201ENST00000453285 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
SDC4P-201ENST00000453285 LRP2P98164 4655 aa3.21□□□□□ -1.9
SDC4P-201ENST00000453285 H3BPC8 53 aa3.2□□□□□ -1.9
SDC4P-201ENST00000453285 MP68P56378 58 aa3.2□□□□□ -1.9
SDC4P-201ENST00000453285 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
SDC4P-201ENST00000453285 LINC00208Q96KT6 92 aa3.2□□□□□ -1.9
SDC4P-201ENST00000453285 SNURFQ9Y675 71 aa3.2□□□□□ -1.9
SDC4P-201ENST00000453285 C1orf64Q8NEQ6 169 aa3.19□□□□□ -1.9
SDC4P-201ENST00000453285 IGKV2-30P06310 120 aa3.18□□□□□ -1.9
SDC4P-201ENST00000453285 LOC101927531A0A1B0GV80 90 aa3.17□□□□□ -1.9
SDC4P-201ENST00000453285 H7BZZ5 65 aa3.17□□□□□ -1.9
SDC4P-201ENST00000453285 CYP4F30PQ9H0H9 118 aa3.17□□□□□ -1.9
SDC4P-201ENST00000453285 ATP11AUNQ6ZP68 121 aa3.16□□□□□ -1.9
SDC4P-201ENST00000453285 NDUFC1O43677 76 aa3.15□□□□□ -1.91
SDC4P-201ENST00000453285 RNF213Q63HN8 5207 aa3.15□□□□□ -1.91
SDC4P-201ENST00000453285 IGKV2D-30A0A075B6S6 120 aa3.14□□□□□ -1.91
SDC4P-201ENST00000453285 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
SDC4P-201ENST00000453285 PCOTHQ58A44 107 aa3.14□□□□□ -1.91
SDC4P-201ENST00000453285 CRCT1Q9UGL9 99 aa3.14□□□□□ -1.91
SDC4P-201ENST00000453285 SPINK7P58062 85 aa3.13□□□□□ -1.91
SDC4P-201ENST00000453285 C7orf65Q6ZTY9 151 aa3.13□□□□□ -1.91
SDC4P-201ENST00000453285 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
SDC4P-201ENST00000453285 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
SDC4P-201ENST00000453285 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
SDC4P-201ENST00000453285 HRES1P13985 223 aa3.11□□□□□ -1.91
SDC4P-201ENST00000453285 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
SDC4P-201ENST00000453285 TMEM258P61165 79 aa3.11□□□□□ -1.91
SDC4P-201ENST00000453285 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
SDC4P-201ENST00000453285 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
SDC4P-201ENST00000453285 H3BS24 57 aa3.09□□□□□ -1.91
SDC4P-201ENST00000453285 FAM236DA0A1B0GTK5 79 aa3.08□□□□□ -1.92
SDC4P-201ENST00000453285 FAM236CP0DP71 79 aa3.08□□□□□ -1.92
SDC4P-201ENST00000453285 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
SDC4P-201ENST00000453285 MPLKIPQ8TAP9 179 aa3.07□□□□□ -1.92
SDC4P-201ENST00000453285 KRTAP3-1Q9BYR8 98 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms