RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
ITGB4-202ENST00000449880 M0QZ58 72 aa8.04□□□□□ -1.12
ITGB4-202ENST00000449880 CFAP47Q6ZTR5 3102 aa8.03□□□□□ -1.12
ITGB4-202ENST00000449880 NOTCH1P46531 2555 aa8.02□□□□□ -1.13
ITGB4-202ENST00000449880 RPS29P62273 56 aaKnown RBP8.02□□□□□ -1.13
ITGB4-202ENST00000449880 WDFY3Q8IZQ1 3526 aa8.02□□□□□ -1.13
ITGB4-202ENST00000449880 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
ITGB4-202ENST00000449880 A8MU10 97 aa8□□□□□ -1.13
ITGB4-202ENST00000449880 PLAC4Q8WY50 150 aa8□□□□□ -1.13
ITGB4-202ENST00000449880 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
ITGB4-202ENST00000449880 KRTAP7-1Q8IUC3 87 aa7.99□□□□□ -1.13
ITGB4-202ENST00000449880 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
ITGB4-202ENST00000449880 BAHCC1Q9P281 2608 aa7.98□□□□□ -1.13
ITGB4-202ENST00000449880 KRTAP11-1Q8IUC1 163 aa7.96□□□□□ -1.14
ITGB4-202ENST00000449880 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.14
ITGB4-202ENST00000449880 DMDP11532 3685 aa7.95□□□□□ -1.14
ITGB4-202ENST00000449880 DMBT1Q9UGM3 2413 aaPredicted RBP7.95□□□□□ -1.14
ITGB4-202ENST00000449880 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
ITGB4-202ENST00000449880 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
ITGB4-202ENST00000449880 ZANQ9Y493 2812 aa7.93□□□□□ -1.14
ITGB4-202ENST00000449880 NSD1Q96L73 2696 aaPredicted RBP7.87□□□□□ -1.15
ITGB4-202ENST00000449880 STAB2Q8WWQ8 2551 aa7.86□□□□□ -1.15
ITGB4-202ENST00000449880 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
ITGB4-202ENST00000449880 RELNP78509 3460 aa7.86□□□□□ -1.15
ITGB4-202ENST00000449880 LAMA5O15230 3695 aa7.84□□□□□ -1.15
ITGB4-202ENST00000449880 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
ITGB4-202ENST00000449880 A8MUU9 505 aa7.82□□□□□ -1.16
ITGB4-202ENST00000449880 ZFHX4Q86UP3 3567 aa7.82□□□□□ -1.16
ITGB4-202ENST00000449880 CELSR2Q9HCU4 2923 aa7.8□□□□□ -1.16
ITGB4-202ENST00000449880 CRYBG3Q68DQ2 2970 aa7.8□□□□□ -1.16
ITGB4-202ENST00000449880 MUC3AQ02505 3323 aa7.78□□□□□ -1.16
ITGB4-202ENST00000449880 DCHS2Q6V1P9 2916 aa7.76□□□□□ -1.17
ITGB4-202ENST00000449880 FBN2P35556 2912 aa7.75□□□□□ -1.17
ITGB4-202ENST00000449880 ASH1LQ9NR48 2969 aaKnown RBP7.75□□□□□ -1.17
ITGB4-202ENST00000449880 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
ITGB4-202ENST00000449880 KRTAP21-3Q3LHN1 58 aa7.69□□□□□ -1.18
ITGB4-202ENST00000449880 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
ITGB4-202ENST00000449880 DCHS1Q96JQ0 3298 aa7.67□□□□□ -1.18
ITGB4-202ENST00000449880 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.18
ITGB4-202ENST00000449880 NF1P21359 2839 aa7.65□□□□□ -1.19
ITGB4-202ENST00000449880 SMG1Q96Q15 3661 aaKnown RBP7.65□□□□□ -1.19
ITGB4-202ENST00000449880 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
ITGB4-202ENST00000449880 PP632Q6XCG6 107 aa7.61□□□□□ -1.19
ITGB4-202ENST00000449880 H0YAA0 97 aa7.57□□□□□ -1.2
ITGB4-202ENST00000449880 TENM4Q6N022 2769 aa7.57□□□□□ -1.2
ITGB4-202ENST00000449880 PDZD2O15018 2839 aa7.57□□□□□ -1.2
ITGB4-202ENST00000449880 CSMD1Q96PZ7 3565 aa7.55□□□□□ -1.2
ITGB4-202ENST00000449880 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
ITGB4-202ENST00000449880 TNP1P09430 55 aa7.5□□□□□ -1.21
ITGB4-202ENST00000449880 P0C880 135 aa7.48□□□□□ -1.21
ITGB4-202ENST00000449880 NBPF19A0A087WUL8 3843 aa7.44□□□□□ -1.22
ITGB4-202ENST00000449880 ANK3Q12955 4377 aaKnown RBP7.44□□□□□ -1.22
ITGB4-202ENST00000449880 SPENQ96T58 3664 aaKnown RBP7.43□□□□□ -1.22
ITGB4-202ENST00000449880 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
ITGB4-202ENST00000449880 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
ITGB4-202ENST00000449880 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
ITGB4-202ENST00000449880 SVEP1Q4LDE5 3571 aa7.38□□□□□ -1.23
ITGB4-202ENST00000449880 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
ITGB4-202ENST00000449880 TENM3Q9P273 2699 aa7.33□□□□□ -1.24
ITGB4-202ENST00000449880 OTOGQ6ZRI0 2925 aa7.33□□□□□ -1.24
ITGB4-202ENST00000449880 TENM1Q9UKZ4 2725 aa7.29□□□□□ -1.24
ITGB4-202ENST00000449880 XP32Q5T750 250 aa7.29□□□□□ -1.24
ITGB4-202ENST00000449880 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
ITGB4-202ENST00000449880 TPRXLQ17RH7 258 aa7.21□□□□□ -1.25
ITGB4-202ENST00000449880 CSMD2Q7Z408 3487 aa7.18□□□□□ -1.26
ITGB4-202ENST00000449880 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
ITGB4-202ENST00000449880 VWFP04275 2813 aa7.16□□□□□ -1.26
ITGB4-202ENST00000449880 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
ITGB4-202ENST00000449880 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
ITGB4-202ENST00000449880 FBN1P35555 2871 aaKnown RBP7.11□□□□□ -1.27
ITGB4-202ENST00000449880 TENM2Q9NT68 2774 aa7.1□□□□□ -1.27
ITGB4-202ENST00000449880 ZFHX3Q15911 3703 aa7.05□□□□□ -1.28
ITGB4-202ENST00000449880 TRRAPQ9Y4A5 3859 aa7.03□□□□□ -1.28
ITGB4-202ENST00000449880 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
ITGB4-202ENST00000449880 VPS13CQ709C8 3753 aa6.96□□□□□ -1.29
ITGB4-202ENST00000449880 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
ITGB4-202ENST00000449880 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
ITGB4-202ENST00000449880 CUBNO60494 3623 aa6.92□□□□□ -1.3
ITGB4-202ENST00000449880 TGP01266 2768 aa6.92□□□□□ -1.3
ITGB4-202ENST00000449880 KRTAP12-1P59990 96 aa6.91□□□□□ -1.3
ITGB4-202ENST00000449880 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
ITGB4-202ENST00000449880 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
ITGB4-202ENST00000449880 ZNF469Q96JG9 3925 aaPredicted RBP6.83□□□□□ -1.32
ITGB4-202ENST00000449880 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
ITGB4-202ENST00000449880 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
ITGB4-202ENST00000449880 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.33
ITGB4-202ENST00000449880 INE1O15225 51 aa6.69□□□□□ -1.34
ITGB4-202ENST00000449880 DNAH9Q9NYC9 4486 aa6.64□□□□□ -1.35
ITGB4-202ENST00000449880 MEGF8Q7Z7M0 2845 aa6.63□□□□□ -1.35
ITGB4-202ENST00000449880 FBN3Q75N90 2809 aa6.63□□□□□ -1.35
ITGB4-202ENST00000449880 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
ITGB4-202ENST00000449880 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
ITGB4-202ENST00000449880 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
ITGB4-202ENST00000449880 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
ITGB4-202ENST00000449880 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
ITGB4-202ENST00000449880 DNAH1Q9P2D7 4330 aa6.44□□□□□ -1.38
ITGB4-202ENST00000449880 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
ITGB4-202ENST00000449880 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
ITGB4-202ENST00000449880 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.39
ITGB4-202ENST00000449880 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms