RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 C14orf132Q9NPU4 83 aa6.23□□□□□ -1.41
LSP1P3-201ENST00000449530 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
LSP1P3-201ENST00000449530 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
LSP1P3-201ENST00000449530 C21orf62-AS1Q17RA5 79 aa6.22□□□□□ -1.41
LSP1P3-201ENST00000449530 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
LSP1P3-201ENST00000449530 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
LSP1P3-201ENST00000449530 A0A1W2PPM0 123 aa6.21□□□□□ -1.42
LSP1P3-201ENST00000449530 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
LSP1P3-201ENST00000449530 MTURNQ8N3F0 131 aa6.21□□□□□ -1.42
LSP1P3-201ENST00000449530 PDE6GP18545 87 aa6.19□□□□□ -1.42
LSP1P3-201ENST00000449530 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
LSP1P3-201ENST00000449530 J3KT08 172 aa6.18□□□□□ -1.42
LSP1P3-201ENST00000449530 H3BT86 120 aa6.17□□□□□ -1.42
LSP1P3-201ENST00000449530 A0A1B0GW54 56 aa6.16□□□□□ -1.42
LSP1P3-201ENST00000449530 M0R2T5 61 aa6.14□□□□□ -1.43
LSP1P3-201ENST00000449530 NDUFB1O75438 58 aa6.14□□□□□ -1.43
LSP1P3-201ENST00000449530 SPCS1Q9Y6A9 102 aa6.14□□□□□ -1.43
LSP1P3-201ENST00000449530 A8MWP4 228 aa6.13□□□□□ -1.43
LSP1P3-201ENST00000449530 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.12□□□□□ -1.43
LSP1P3-201ENST00000449530 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
LSP1P3-201ENST00000449530 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
LSP1P3-201ENST00000449530 NREPQ16612 68 aa6.11□□□□□ -1.43
LSP1P3-201ENST00000449530 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
LSP1P3-201ENST00000449530 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
LSP1P3-201ENST00000449530 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
LSP1P3-201ENST00000449530 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
LSP1P3-201ENST00000449530 SMCPP49901 116 aaPredicted RBP6.07□□□□□ -1.44
LSP1P3-201ENST00000449530 ZCCHC13Q8WW36 166 aaKnown RBP6.07□□□□□ -1.44
LSP1P3-201ENST00000449530 K7EP34 96 aa6.06□□□□□ -1.44
LSP1P3-201ENST00000449530 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
LSP1P3-201ENST00000449530 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
LSP1P3-201ENST00000449530 PCP4L1A6NKN8 68 aa6.05□□□□□ -1.44
LSP1P3-201ENST00000449530 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
LSP1P3-201ENST00000449530 Q6ZVQ6 151 aa6.05□□□□□ -1.44
LSP1P3-201ENST00000449530 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
LSP1P3-201ENST00000449530 K7EQZ3 153 aa6.04□□□□□ -1.44
LSP1P3-201ENST00000449530 HRES1P13985 223 aa6.04□□□□□ -1.44
LSP1P3-201ENST00000449530 MMP24-AS1A0A0U1RRL7 71 aa6.03□□□□□ -1.44
LSP1P3-201ENST00000449530 PRO0461Q9UI25 63 aa6.03□□□□□ -1.44
LSP1P3-201ENST00000449530 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
LSP1P3-201ENST00000449530 BPY2O14599 106 aa6.01□□□□□ -1.45
LSP1P3-201ENST00000449530 TMEM254Q8TBM7 123 aa6.01□□□□□ -1.45
LSP1P3-201ENST00000449530 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
LSP1P3-201ENST00000449530 SPINK7P58062 85 aa5.99□□□□□ -1.45
LSP1P3-201ENST00000449530 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
LSP1P3-201ENST00000449530 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
LSP1P3-201ENST00000449530 GTF2H5Q6ZYL4 71 aa5.98□□□□□ -1.45
LSP1P3-201ENST00000449530 Q8N9L7 120 aa5.98□□□□□ -1.45
LSP1P3-201ENST00000449530 NDUFS5O43920 106 aa5.97□□□□□ -1.45
LSP1P3-201ENST00000449530 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
LSP1P3-201ENST00000449530 WFDC13Q8IUB5 93 aa5.95□□□□□ -1.46
LSP1P3-201ENST00000449530 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
LSP1P3-201ENST00000449530 USH2AO75445 5202 aa5.94□□□□□ -1.46
LSP1P3-201ENST00000449530 UBL5Q9BZL1 73 aa5.94□□□□□ -1.46
LSP1P3-201ENST00000449530 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
LSP1P3-201ENST00000449530 CASC2Q6XLA1 102 aa5.92□□□□□ -1.46
LSP1P3-201ENST00000449530 F8W1H4 67 aa5.9□□□□□ -1.46
LSP1P3-201ENST00000449530 ETDBQ3ZM63 59 aa5.9□□□□□ -1.46
LSP1P3-201ENST00000449530 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
LSP1P3-201ENST00000449530 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
LSP1P3-201ENST00000449530 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
LSP1P3-201ENST00000449530 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
LSP1P3-201ENST00000449530 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
LSP1P3-201ENST00000449530 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
LSP1P3-201ENST00000449530 Q5W150 140 aa5.86□□□□□ -1.47
LSP1P3-201ENST00000449530 MT2AP02795 61 aa5.84□□□□□ -1.47
LSP1P3-201ENST00000449530 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
LSP1P3-201ENST00000449530 CXCL6P80162 114 aa5.83□□□□□ -1.48
LSP1P3-201ENST00000449530 MT1FP04733 61 aa5.8□□□□□ -1.48
LSP1P3-201ENST00000449530 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
LSP1P3-201ENST00000449530 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
LSP1P3-201ENST00000449530 ACYP1P07311 99 aa5.74□□□□□ -1.49
LSP1P3-201ENST00000449530 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
LSP1P3-201ENST00000449530 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
LSP1P3-201ENST00000449530 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
LSP1P3-201ENST00000449530 A0A1B0GV90 55 aa5.71□□□□□ -1.5
LSP1P3-201ENST00000449530 ATP5EP2Q5VTU8 51 aa5.71□□□□□ -1.5
LSP1P3-201ENST00000449530 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
LSP1P3-201ENST00000449530 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
LSP1P3-201ENST00000449530 HIST1H4AP62805 103 aaKnown RBP5.68□□□□□ -1.5
LSP1P3-201ENST00000449530 LCE2BO14633 110 aa5.66□□□□□ -1.5
LSP1P3-201ENST00000449530 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
LSP1P3-201ENST00000449530 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
LSP1P3-201ENST00000449530 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
LSP1P3-201ENST00000449530 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
LSP1P3-201ENST00000449530 A0A087WVE0 104 aa5.61□□□□□ -1.51
LSP1P3-201ENST00000449530 S4R3F8 94 aa5.61□□□□□ -1.51
LSP1P3-201ENST00000449530 LOC101927531A0A1B0GV80 90 aa5.6□□□□□ -1.51
LSP1P3-201ENST00000449530 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
LSP1P3-201ENST00000449530 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
LSP1P3-201ENST00000449530 NEBP20929 6669 aa5.59□□□□□ -1.51
LSP1P3-201ENST00000449530 H0Y9P7 68 aa5.57□□□□□ -1.52
LSP1P3-201ENST00000449530 UQCRQO14949 82 aa5.57□□□□□ -1.52
LSP1P3-201ENST00000449530 LCA10Q71F78 164 aa5.56□□□□□ -1.52
LSP1P3-201ENST00000449530 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
LSP1P3-201ENST00000449530 ATOX1O00244 68 aa5.54□□□□□ -1.52
LSP1P3-201ENST00000449530 J3QR89 54 aa5.53□□□□□ -1.52
LSP1P3-201ENST00000449530 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
LSP1P3-201ENST00000449530 FAM236AA0A1B0GUQ0 79 aa5.52□□□□□ -1.53
LSP1P3-201ENST00000449530 FAM236BA0A1B0GV22 79 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms