RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PRR4Q16378 134 aa10.93□□□□□ -0.66
SGCE-207ENST00000447873 A8MWP4 228 aa10.92□□□□□ -0.66
SGCE-207ENST00000447873 IGLV7-46A0A075B6I9 117 aa10.89□□□□□ -0.67
SGCE-207ENST00000447873 K7EQZ3 153 aa10.88□□□□□ -0.67
SGCE-207ENST00000447873 Q8N9L7 120 aa10.88□□□□□ -0.67
SGCE-207ENST00000447873 IGHV6-1A0A0B4J1U7 121 aa10.87□□□□□ -0.67
SGCE-207ENST00000447873 A0A1B0GVX0 72 aa10.87□□□□□ -0.67
SGCE-207ENST00000447873 PRR15Q8IV56 129 aa10.86□□□□□ -0.67
SGCE-207ENST00000447873 HERC1Q15751 4861 aa10.83□□□□□ -0.68
SGCE-207ENST00000447873 HIST1H4AP62805 103 aaKnown RBP10.82□□□□□ -0.68
SGCE-207ENST00000447873 MT-ATP8P03928 68 aa10.81□□□□□ -0.68
SGCE-207ENST00000447873 C9orf92A6NGG3 77 aa10.79□□□□□ -0.68
SGCE-207ENST00000447873 LINC00313P59037 77 aa10.79□□□□□ -0.68
SGCE-207ENST00000447873 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
SGCE-207ENST00000447873 NOTCH2NLQ7Z3S9 236 aa10.77□□□□□ -0.68
SGCE-207ENST00000447873 C8orf17Q9NRJ1 99 aa10.77□□□□□ -0.68
SGCE-207ENST00000447873 KRTAP13-3Q3SY46 172 aa10.75□□□□□ -0.69
SGCE-207ENST00000447873 TPRXLQ17RH7 258 aa10.74□□□□□ -0.69
SGCE-207ENST00000447873 MMP24-AS1A0A0U1RRL7 71 aa10.73□□□□□ -0.69
SGCE-207ENST00000447873 A0A087WVE0 104 aa10.72□□□□□ -0.69
SGCE-207ENST00000447873 HCG22E2RYF7 251 aa10.72□□□□□ -0.69
SGCE-207ENST00000447873 IMUPQ9GZP8 106 aa10.72□□□□□ -0.69
SGCE-207ENST00000447873 WFDC13Q8IUB5 93 aa10.7□□□□□ -0.7
SGCE-207ENST00000447873 hDV103S1A0JD37 113 aa10.69□□□□□ -0.7
SGCE-207ENST00000447873 CASC2Q6XLA1 102 aa10.69□□□□□ -0.7
SGCE-207ENST00000447873 KRTAP16-1A8MUX0 517 aa10.66□□□□□ -0.7
SGCE-207ENST00000447873 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
SGCE-207ENST00000447873 LPAP08519 4548 aa10.65□□□□□ -0.71
SGCE-207ENST00000447873 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
SGCE-207ENST00000447873 HMCN2Q8NDA2 5059 aa10.64□□□□□ -0.71
SGCE-207ENST00000447873 XP32Q5T750 250 aa10.63□□□□□ -0.71
SGCE-207ENST00000447873 NDUFS5O43920 106 aa10.57□□□□□ -0.72
SGCE-207ENST00000447873 C20orf166-AS1Q96NR2 134 aa10.57□□□□□ -0.72
SGCE-207ENST00000447873 Q8N9P0 234 aaPredicted RBP10.56□□□□□ -0.72
SGCE-207ENST00000447873 A8MUU9 505 aa10.56□□□□□ -0.72
SGCE-207ENST00000447873 Q75L30 129 aa10.55□□□□□ -0.72
SGCE-207ENST00000447873 FAM236AA0A1B0GUQ0 79 aa10.54□□□□□ -0.72
SGCE-207ENST00000447873 FAM236BA0A1B0GV22 79 aa10.54□□□□□ -0.72
SGCE-207ENST00000447873 SCGB1A1P11684 91 aa10.52□□□□□ -0.72
SGCE-207ENST00000447873 RPL37P61927 97 aaKnown RBP10.52□□□□□ -0.72
SGCE-207ENST00000447873 LRP2P98164 4655 aa10.52□□□□□ -0.73
SGCE-207ENST00000447873 TP53AIP1Q9HCN2 124 aa10.46□□□□□ -0.74
SGCE-207ENST00000447873 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
SGCE-207ENST00000447873 ATOX1O00244 68 aa10.41□□□□□ -0.74
SGCE-207ENST00000447873 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
SGCE-207ENST00000447873 OCR1Q9BZK8 76 aa10.41□□□□□ -0.74
SGCE-207ENST00000447873 SEC61BP60468 96 aaKnown RBP10.4□□□□□ -0.74
SGCE-207ENST00000447873 UQCRQO14949 82 aa10.38□□□□□ -0.75
SGCE-207ENST00000447873 PCOTHQ58A44 107 aa10.38□□□□□ -0.75
SGCE-207ENST00000447873 Q5W150 140 aa10.37□□□□□ -0.75
SGCE-207ENST00000447873 SMIM20Q8N5G0 67 aa10.37□□□□□ -0.75
SGCE-207ENST00000447873 TRAV22A0A0B4J277 110 aa10.32□□□□□ -0.76
SGCE-207ENST00000447873 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
SGCE-207ENST00000447873 TRAV7A0A075B6U4 112 aa10.31□□□□□ -0.76
SGCE-207ENST00000447873 H0Y9P7 68 aa10.28□□□□□ -0.76
SGCE-207ENST00000447873 C5orf47Q569G3 176 aa10.27□□□□□ -0.76
SGCE-207ENST00000447873 MP68P56378 58 aa10.26□□□□□ -0.77
SGCE-207ENST00000447873 SERP2Q8N6R1 65 aa10.26□□□□□ -0.77
SGCE-207ENST00000447873 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
SGCE-207ENST00000447873 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
SGCE-207ENST00000447873 IGKV2D-30A0A075B6S6 120 aa10.21□□□□□ -0.78
SGCE-207ENST00000447873 IGKV2-30P06310 120 aa10.21□□□□□ -0.78
SGCE-207ENST00000447873 SPINK7P58062 85 aa10.19□□□□□ -0.78
SGCE-207ENST00000447873 LINC00208Q96KT6 92 aa10.19□□□□□ -0.78
SGCE-207ENST00000447873 C1orf64Q8NEQ6 169 aa10.18□□□□□ -0.78
SGCE-207ENST00000447873 C7orf65Q6ZTY9 151 aa10.18□□□□□ -0.78
SGCE-207ENST00000447873 LOC101927531A0A1B0GV80 90 aa10.17□□□□□ -0.78
SGCE-207ENST00000447873 H3BPC8 53 aa10.16□□□□□ -0.78
SGCE-207ENST00000447873 COX7CP15954 63 aa10.15□□□□□ -0.78
SGCE-207ENST00000447873 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
SGCE-207ENST00000447873 RNF213Q63HN8 5207 aa10.12□□□□□ -0.79
SGCE-207ENST00000447873 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
SGCE-207ENST00000447873 C20orf197Q8N268 126 aa10.1□□□□□ -0.79
SGCE-207ENST00000447873 MUC2Q02817 5179 aa10.1□□□□□ -0.79
SGCE-207ENST00000447873 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
SGCE-207ENST00000447873 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
SGCE-207ENST00000447873 HRES1P13985 223 aa10.02□□□□□ -0.81
SGCE-207ENST00000447873 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
SGCE-207ENST00000447873 CCDC179H3BU77 68 aa9.98□□□□□ -0.81
SGCE-207ENST00000447873 C4orf26Q17RF5 130 aa9.95□□□□□ -0.82
SGCE-207ENST00000447873 RBM12B-AS1Q9P1G2 102 aa9.95□□□□□ -0.82
SGCE-207ENST00000447873 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
SGCE-207ENST00000447873 NDUFC1O43677 76 aa9.88□□□□□ -0.83
SGCE-207ENST00000447873 CYSTM1Q9H1C7 97 aa9.88□□□□□ -0.83
SGCE-207ENST00000447873 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
SGCE-207ENST00000447873 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
SGCE-207ENST00000447873 PCP4P48539 62 aa9.87□□□□□ -0.83
SGCE-207ENST00000447873 COX6B2Q6YFQ2 88 aa9.87□□□□□ -0.83
SGCE-207ENST00000447873 H7BZZ5 65 aa9.83□□□□□ -0.84
SGCE-207ENST00000447873 LCE2BO14633 110 aa9.83□□□□□ -0.84
SGCE-207ENST00000447873 KRTAP19-2Q3LHN2 52 aa9.8□□□□□ -0.84
SGCE-207ENST00000447873 KRTAP3-1Q9BYR8 98 aa9.79□□□□□ -0.84
SGCE-207ENST00000447873 SPANXA2-OT1Q8N9U9 137 aa9.78□□□□□ -0.84
SGCE-207ENST00000447873 A8MUN3 132 aa9.75□□□□□ -0.85
SGCE-207ENST00000447873 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
SGCE-207ENST00000447873 LOC100996750A0A140TA64 210 aa9.73□□□□□ -0.85
SGCE-207ENST00000447873 KRTAP4-6Q9BYQ5 205 aa9.73□□□□□ -0.85
SGCE-207ENST00000447873 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
SGCE-207ENST00000447873 LCE2CQ5TA81 110 aa9.71□□□□□ -0.85
SGCE-207ENST00000447873 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms