RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 A0A1B0GW54 56 aa7.16□□□□□ -1.26
HLA-DOB-207ENST00000447394 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
HLA-DOB-207ENST00000447394 MUC2Q02817 5179 aa7.14□□□□□ -1.27
HLA-DOB-207ENST00000447394 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
HLA-DOB-207ENST00000447394 NREPQ16612 68 aa7.14□□□□□ -1.27
HLA-DOB-207ENST00000447394 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
HLA-DOB-207ENST00000447394 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
HLA-DOB-207ENST00000447394 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
HLA-DOB-207ENST00000447394 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
HLA-DOB-207ENST00000447394 J3KT08 172 aa7.11□□□□□ -1.27
HLA-DOB-207ENST00000447394 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
HLA-DOB-207ENST00000447394 Q6ZVQ6 151 aa7.11□□□□□ -1.27
HLA-DOB-207ENST00000447394 LINC00846Q9NV44 126 aa7.11□□□□□ -1.27
HLA-DOB-207ENST00000447394 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
HLA-DOB-207ENST00000447394 IGKV3D-7A0A0C4DH55 119 aa7.09□□□□□ -1.27
HLA-DOB-207ENST00000447394 LINC00313P59037 77 aa7.09□□□□□ -1.27
HLA-DOB-207ENST00000447394 A8MWP4 228 aa7.07□□□□□ -1.28
HLA-DOB-207ENST00000447394 K7EQZ3 153 aa7.06□□□□□ -1.28
HLA-DOB-207ENST00000447394 Q75L30 129 aa7.06□□□□□ -1.28
HLA-DOB-207ENST00000447394 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
HLA-DOB-207ENST00000447394 A8MUU9 505 aa7.05□□□□□ -1.28
HLA-DOB-207ENST00000447394 Q8N9L7 120 aa7.05□□□□□ -1.28
HLA-DOB-207ENST00000447394 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
HLA-DOB-207ENST00000447394 C8orf87E5RJ46 101 aa7.04□□□□□ -1.28
HLA-DOB-207ENST00000447394 BPY2O14599 106 aa7.04□□□□□ -1.28
HLA-DOB-207ENST00000447394 NDUFB1O75438 58 aa7.04□□□□□ -1.28
HLA-DOB-207ENST00000447394 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
HLA-DOB-207ENST00000447394 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
HLA-DOB-207ENST00000447394 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
HLA-DOB-207ENST00000447394 PRR15Q8IV56 129 aa7.03□□□□□ -1.28
HLA-DOB-207ENST00000447394 UBL5Q9BZL1 73 aa7.02□□□□□ -1.29
HLA-DOB-207ENST00000447394 MMP24-AS1A0A0U1RRL7 71 aa7□□□□□ -1.29
HLA-DOB-207ENST00000447394 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
HLA-DOB-207ENST00000447394 IMUPQ9GZP8 106 aa6.98□□□□□ -1.29
HLA-DOB-207ENST00000447394 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
HLA-DOB-207ENST00000447394 ACYP1P07311 99 aa6.97□□□□□ -1.29
HLA-DOB-207ENST00000447394 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
HLA-DOB-207ENST00000447394 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
HLA-DOB-207ENST00000447394 hDV103S1A0JD37 113 aa6.92□□□□□ -1.3
HLA-DOB-207ENST00000447394 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
HLA-DOB-207ENST00000447394 MRPL34Q9BQ48 92 aaKnown RBP6.91□□□□□ -1.3
HLA-DOB-207ENST00000447394 CXCL6P80162 114 aa6.89□□□□□ -1.31
HLA-DOB-207ENST00000447394 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
HLA-DOB-207ENST00000447394 CASC2Q6XLA1 102 aa6.89□□□□□ -1.31
HLA-DOB-207ENST00000447394 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
HLA-DOB-207ENST00000447394 NDUFS5O43920 106 aa6.88□□□□□ -1.31
HLA-DOB-207ENST00000447394 HCG22E2RYF7 251 aa6.87□□□□□ -1.31
HLA-DOB-207ENST00000447394 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
HLA-DOB-207ENST00000447394 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
HLA-DOB-207ENST00000447394 LINC00643Q86TS7 51 aa6.85□□□□□ -1.31
HLA-DOB-207ENST00000447394 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
HLA-DOB-207ENST00000447394 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
HLA-DOB-207ENST00000447394 UQCRQO14949 82 aa6.81□□□□□ -1.32
HLA-DOB-207ENST00000447394 HIST1H4AP62805 103 aaKnown RBP6.8□□□□□ -1.32
HLA-DOB-207ENST00000447394 Q5W150 140 aa6.8□□□□□ -1.32
HLA-DOB-207ENST00000447394 A0A087WVE0 104 aa6.79□□□□□ -1.32
HLA-DOB-207ENST00000447394 HRES1P13985 223 aa6.78□□□□□ -1.32
HLA-DOB-207ENST00000447394 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
HLA-DOB-207ENST00000447394 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
HLA-DOB-207ENST00000447394 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
HLA-DOB-207ENST00000447394 SPINK7P58062 85 aa6.77□□□□□ -1.33
HLA-DOB-207ENST00000447394 ATOX1O00244 68 aa6.76□□□□□ -1.33
HLA-DOB-207ENST00000447394 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
HLA-DOB-207ENST00000447394 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
HLA-DOB-207ENST00000447394 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
HLA-DOB-207ENST00000447394 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
HLA-DOB-207ENST00000447394 COX7CP15954 63 aa6.74□□□□□ -1.33
HLA-DOB-207ENST00000447394 MT1HP80294 61 aa6.73□□□□□ -1.33
HLA-DOB-207ENST00000447394 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
HLA-DOB-207ENST00000447394 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.34
HLA-DOB-207ENST00000447394 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
HLA-DOB-207ENST00000447394 TMEM258P61165 79 aa6.7□□□□□ -1.34
HLA-DOB-207ENST00000447394 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
HLA-DOB-207ENST00000447394 FAM236DA0A1B0GTK5 79 aa6.67□□□□□ -1.34
HLA-DOB-207ENST00000447394 FAM236CP0DP71 79 aa6.67□□□□□ -1.34
HLA-DOB-207ENST00000447394 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
HLA-DOB-207ENST00000447394 TP53AIP1Q9HCN2 124 aa6.66□□□□□ -1.34
HLA-DOB-207ENST00000447394 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
HLA-DOB-207ENST00000447394 RBM12B-AS1Q9P1G2 102 aa6.65□□□□□ -1.34
HLA-DOB-207ENST00000447394 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
HLA-DOB-207ENST00000447394 M0R2T5 61 aa6.6□□□□□ -1.35
HLA-DOB-207ENST00000447394 H0Y9P7 68 aa6.57□□□□□ -1.36
HLA-DOB-207ENST00000447394 C4orf26Q17RF5 130 aa6.57□□□□□ -1.36
HLA-DOB-207ENST00000447394 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
HLA-DOB-207ENST00000447394 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
HLA-DOB-207ENST00000447394 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
HLA-DOB-207ENST00000447394 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
HLA-DOB-207ENST00000447394 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
HLA-DOB-207ENST00000447394 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
HLA-DOB-207ENST00000447394 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
HLA-DOB-207ENST00000447394 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
HLA-DOB-207ENST00000447394 NDUFC1O43677 76 aa6.48□□□□□ -1.37
HLA-DOB-207ENST00000447394 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
HLA-DOB-207ENST00000447394 LINC00208Q96KT6 92 aa6.48□□□□□ -1.37
HLA-DOB-207ENST00000447394 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
HLA-DOB-207ENST00000447394 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
HLA-DOB-207ENST00000447394 KLKP1Q107X0 134 aa6.46□□□□□ -1.38
HLA-DOB-207ENST00000447394 MP68P56378 58 aa6.44□□□□□ -1.38
HLA-DOB-207ENST00000447394 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
HLA-DOB-207ENST00000447394 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms