RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 C1orf64Q8NEQ6 169 aa13.12□□□□□ -0.31
PREB-206ENST00000444452 HYDINQ4G0P3 5121 aa13.11□□□□□ -0.31
PREB-206ENST00000444452 SPANXA2-OT1Q8N9U9 137 aa13.09□□□□□ -0.31
PREB-206ENST00000444452 MRPL34Q9BQ48 92 aaKnown RBP13.08□□□□□ -0.31
PREB-206ENST00000444452 LRP1BQ9NZR2 4599 aa13.04□□□□□ -0.32
PREB-206ENST00000444452 A0A087X002 238 aa13.04□□□□□ -0.32
PREB-206ENST00000444452 PRR4Q16378 134 aa13.03□□□□□ -0.32
PREB-206ENST00000444452 SPINK6Q6UWN8 80 aa13.03□□□□□ -0.32
PREB-206ENST00000444452 NOTCH2NLQ7Z3S9 236 aa13.03□□□□□ -0.32
PREB-206ENST00000444452 KRTAP13-2Q52LG2 175 aa13.02□□□□□ -0.33
PREB-206ENST00000444452 NDUFS5O43920 106 aa13.01□□□□□ -0.33
PREB-206ENST00000444452 KRTAP1-4P0C5Y4 121 aa12.96□□□□□ -0.33
PREB-206ENST00000444452 C8orf87E5RJ46 101 aa12.95□□□□□ -0.34
PREB-206ENST00000444452 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
PREB-206ENST00000444452 IGLV7-46A0A075B6I9 117 aa12.91□□□□□ -0.34
PREB-206ENST00000444452 C1orf195Q5TG92 126 aa12.88□□□□□ -0.35
PREB-206ENST00000444452 Q1T7F1 81 aa12.86□□□□□ -0.35
PREB-206ENST00000444452 PCOTHQ58A44 107 aa12.85□□□□□ -0.35
PREB-206ENST00000444452 LIMD2Q9BT23 127 aa12.84□□□□□ -0.35
PREB-206ENST00000444452 VPS13BQ7Z7G8 4022 aa12.84□□□□□ -0.35
PREB-206ENST00000444452 KRTAP13-3Q3SY46 172 aa12.84□□□□□ -0.35
PREB-206ENST00000444452 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
PREB-206ENST00000444452 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
PREB-206ENST00000444452 LINC00313P59037 77 aa12.82□□□□□ -0.36
PREB-206ENST00000444452 LOC101927531A0A1B0GV80 90 aa12.81□□□□□ -0.36
PREB-206ENST00000444452 PLA2G1BP04054 148 aaKnown RBP12.81□□□□□ -0.36
PREB-206ENST00000444452 Q5W150 140 aa12.8□□□□□ -0.36
PREB-206ENST00000444452 Q8N9P0 234 aaPredicted RBP12.76□□□□□ -0.37
PREB-206ENST00000444452 TYMSOSQ8TAI1 123 aa12.76□□□□□ -0.37
PREB-206ENST00000444452 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
PREB-206ENST00000444452 SPINK1P00995 79 aa12.73□□□□□ -0.37
PREB-206ENST00000444452 V9GYY9 64 aa12.73□□□□□ -0.37
PREB-206ENST00000444452 PKHD1P08F94 4074 aa12.73□□□□□ -0.37
PREB-206ENST00000444452 COA5Q86WW8 74 aa12.72□□□□□ -0.37
PREB-206ENST00000444452 FAM229AH3BQW9 127 aa12.7□□□□□ -0.38
PREB-206ENST00000444452 KRTAP16-1A8MUX0 517 aa12.69□□□□□ -0.38
PREB-206ENST00000444452 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
PREB-206ENST00000444452 PRO0628Q9UI54 55 aa12.67□□□□□ -0.38
PREB-206ENST00000444452 DYNC1H1Q14204 4646 aaKnown RBP12.64□□□□□ -0.39
PREB-206ENST00000444452 RPS29P62273 56 aaKnown RBP12.64□□□□□ -0.39
PREB-206ENST00000444452 PRR26Q8N8Z3 221 aa12.61□□□□□ -0.39
PREB-206ENST00000444452 PSPHP1O15172 72 aa12.61□□□□□ -0.39
PREB-206ENST00000444452 LINC00304Q8N9R0 145 aa12.6□□□□□ -0.39
PREB-206ENST00000444452 BRK1Q8WUW1 75 aa12.6□□□□□ -0.39
PREB-206ENST00000444452 SMR3BP02814 79 aaPredicted RBP12.59□□□□□ -0.39
PREB-206ENST00000444452 SPAG11AQ6PDA7 123 aa12.59□□□□□ -0.39
PREB-206ENST00000444452 HRES1P13985 223 aa12.58□□□□□ -0.4
PREB-206ENST00000444452 IGKV2-30P06310 120 aa12.55□□□□□ -0.4
PREB-206ENST00000444452 A8MUN3 132 aa12.55□□□□□ -0.4
PREB-206ENST00000444452 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
PREB-206ENST00000444452 RETNLBQ9BQ08 111 aa12.52□□□□□ -0.4
PREB-206ENST00000444452 APOBP04114 4563 aaKnown RBP12.51□□□□□ -0.41
PREB-206ENST00000444452 Q5VV11 94 aa12.5□□□□□ -0.41
PREB-206ENST00000444452 RYR2Q92736 4967 aa12.47□□□□□ -0.41
PREB-206ENST00000444452 DMAC1Q96GE9 116 aa12.47□□□□□ -0.41
PREB-206ENST00000444452 ACYP2P14621 99 aa12.45□□□□□ -0.42
PREB-206ENST00000444452 PRR15LQ9BU68 103 aa12.45□□□□□ -0.42
PREB-206ENST00000444452 FAT1Q14517 4588 aa12.43□□□□□ -0.42
PREB-206ENST00000444452 LINC01558Q9Y6Z2 57 aa12.42□□□□□ -0.42
PREB-206ENST00000444452 PKHD1L1Q86WI1 4243 aa12.38□□□□□ -0.43
PREB-206ENST00000444452 Q75L30 129 aa12.38□□□□□ -0.43
PREB-206ENST00000444452 IGKV2D-30A0A075B6S6 120 aa12.36□□□□□ -0.43
PREB-206ENST00000444452 CHKB-CPT1BH3BT56 60 aa12.35□□□□□ -0.43
PREB-206ENST00000444452 KMT2CQ8NEZ4 4911 aaKnown RBP12.31□□□□□ -0.44
PREB-206ENST00000444452 C7orf65Q6ZTY9 151 aa12.25□□□□□ -0.45
PREB-206ENST00000444452 C20orf166-AS1Q96NR2 134 aa12.24□□□□□ -0.45
PREB-206ENST00000444452 A8MUU9 505 aa12.23□□□□□ -0.45
PREB-206ENST00000444452 A6NED7 52 aa12.2□□□□□ -0.46
PREB-206ENST00000444452 C9orf92A6NGG3 77 aa12.2□□□□□ -0.46
PREB-206ENST00000444452 A8MU10 97 aa12.15□□□□□ -0.46
PREB-206ENST00000444452 LCA10Q71F78 164 aa12.12□□□□□ -0.47
PREB-206ENST00000444452 CDC42SE1Q9NRR8 79 aa12.1□□□□□ -0.47
PREB-206ENST00000444452 SPINK7P58062 85 aa12.06□□□□□ -0.48
PREB-206ENST00000444452 Q5VSD8 79 aa12.06□□□□□ -0.48
PREB-206ENST00000444452 Q8N1X5 172 aa12.06□□□□□ -0.48
PREB-206ENST00000444452 KRTAP10-8P60410 259 aa12.05□□□□□ -0.48
PREB-206ENST00000444452 FLG2Q5D862 2391 aaPredicted RBP12.05□□□□□ -0.48
PREB-206ENST00000444452 HSPG2P98160 4391 aa12.01□□□□□ -0.49
PREB-206ENST00000444452 A0A1B0GU69 56 aa12.01□□□□□ -0.49
PREB-206ENST00000444452 ATP11AUNQ6ZP68 121 aa12□□□□□ -0.49
PREB-206ENST00000444452 TNXBP22105 4242 aa11.98□□□□□ -0.49
PREB-206ENST00000444452 FAT3Q8TDW7 4589 aa11.95□□□□□ -0.5
PREB-206ENST00000444452 RYR3Q15413 4870 aa11.95□□□□□ -0.5
PREB-206ENST00000444452 LRP1Q07954 4544 aaKnown RBP11.94□□□□□ -0.5
PREB-206ENST00000444452 SPTSSBQ8NFR3 76 aa11.93□□□□□ -0.5
PREB-206ENST00000444452 PMAIP1Q13794 54 aa11.91□□□□□ -0.5
PREB-206ENST00000444452 RYR1P21817 5038 aa11.91□□□□□ -0.5
PREB-206ENST00000444452 KRTAP3-1Q9BYR8 98 aa11.86□□□□□ -0.51
PREB-206ENST00000444452 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
PREB-206ENST00000444452 UQCR11O14957 56 aa11.77□□□□□ -0.52
PREB-206ENST00000444452 A6NN06 94 aa11.77□□□□□ -0.53
PREB-206ENST00000444452 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
PREB-206ENST00000444452 RPL37P61927 97 aaKnown RBP11.76□□□□□ -0.53
PREB-206ENST00000444452 COX6B2Q6YFQ2 88 aa11.75□□□□□ -0.53
PREB-206ENST00000444452 SEC61GP60059 68 aa11.72□□□□□ -0.53
PREB-206ENST00000444452 MT1HL1P0DM35 61 aa11.72□□□□□ -0.53
PREB-206ENST00000444452 XP32Q5T750 250 aa11.7□□□□□ -0.54
PREB-206ENST00000444452 MIR22HGQ0VDD5 57 aa11.7□□□□□ -0.54
PREB-206ENST00000444452 KIAA1109Q2LD37 5005 aa11.69□□□□□ -0.54
PREB-206ENST00000444452 DMBT1Q9UGM3 2413 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms