RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 ANKRD29Q8N6D5 301 aa10.16□□□□□ -0.78
POLR2J3-202ENST00000443430 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
POLR2J3-202ENST00000443430 SCGB1C2P0DMR2 95 aa10.14□□□□□ -0.79
POLR2J3-202ENST00000443430 NOTCH2NLQ7Z3S9 236 aa10.13□□□□□ -0.79
POLR2J3-202ENST00000443430 SIGMAR1Q99720 223 aa10.13□□□□□ -0.79
POLR2J3-202ENST00000443430 TRBV7-4A0A0J9YYF1 115 aa10.09□□□□□ -0.79
POLR2J3-202ENST00000443430 TRACP01848 142 aa10.09□□□□□ -0.79
POLR2J3-202ENST00000443430 LINC00313P59037 77 aa10.09□□□□□ -0.79
POLR2J3-202ENST00000443430 CCKP06307 115 aa10.07□□□□□ -0.8
POLR2J3-202ENST00000443430 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
POLR2J3-202ENST00000443430 IGKV4-1P06312 121 aa10.05□□□□□ -0.8
POLR2J3-202ENST00000443430 VPS25Q9BRG1 176 aa10.05□□□□□ -0.8
POLR2J3-202ENST00000443430 M0R143 59 aa10.02□□□□□ -0.81
POLR2J3-202ENST00000443430 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
POLR2J3-202ENST00000443430 RBM3P98179 157 aaKnown RBP10□□□□□ -0.81
POLR2J3-202ENST00000443430 NAA38Q9BRA0 125 aaKnown RBP10□□□□□ -0.81
POLR2J3-202ENST00000443430 NEBP20929 6669 aa9.99□□□□□ -0.81
POLR2J3-202ENST00000443430 BAALC-AS2P0C853 105 aa9.99□□□□□ -0.81
POLR2J3-202ENST00000443430 MTURNQ8N3F0 131 aa9.99□□□□□ -0.81
POLR2J3-202ENST00000443430 DSCR8Q96T75 97 aa9.99□□□□□ -0.81
POLR2J3-202ENST00000443430 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
POLR2J3-202ENST00000443430 ATXN8Q156A1 80 aa9.94□□□□□ -0.82
POLR2J3-202ENST00000443430 IGHV6-1A0A0B4J1U7 121 aa9.93□□□□□ -0.82
POLR2J3-202ENST00000443430 A8MWP4 228 aa9.93□□□□□ -0.82
POLR2J3-202ENST00000443430 TSTD3H0UI37 97 aa9.93□□□□□ -0.82
POLR2J3-202ENST00000443430 C9JAW5 83 aa9.92□□□□□ -0.82
POLR2J3-202ENST00000443430 Q8N9P0 234 aaPredicted RBP9.92□□□□□ -0.82
POLR2J3-202ENST00000443430 MUC12Q9UKN1 5478 aa9.89□□□□□ -0.83
POLR2J3-202ENST00000443430 BATFQ16520 125 aa9.88□□□□□ -0.83
POLR2J3-202ENST00000443430 SPINK7P58062 85 aa9.86□□□□□ -0.83
POLR2J3-202ENST00000443430 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
POLR2J3-202ENST00000443430 A0A1B0GVX0 72 aa9.84□□□□□ -0.83
POLR2J3-202ENST00000443430 C21orf62-AS1Q17RA5 79 aa9.84□□□□□ -0.83
POLR2J3-202ENST00000443430 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
POLR2J3-202ENST00000443430 C8orf87E5RJ46 101 aa9.82□□□□□ -0.84
POLR2J3-202ENST00000443430 Q6ZQT0 140 aa9.82□□□□□ -0.84
POLR2J3-202ENST00000443430 ZCCHC13Q8WW36 166 aaKnown RBP9.82□□□□□ -0.84
POLR2J3-202ENST00000443430 J3KT08 172 aa9.81□□□□□ -0.84
POLR2J3-202ENST00000443430 C14orf132Q9NPU4 83 aa9.79□□□□□ -0.84
POLR2J3-202ENST00000443430 LOC110117498A0A087WWA1 95 aa9.78□□□□□ -0.84
POLR2J3-202ENST00000443430 NDUFB1O75438 58 aa9.76□□□□□ -0.85
POLR2J3-202ENST00000443430 PDE6GP18545 87 aa9.76□□□□□ -0.85
POLR2J3-202ENST00000443430 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
POLR2J3-202ENST00000443430 A0A1B0GW54 56 aa9.72□□□□□ -0.85
POLR2J3-202ENST00000443430 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
POLR2J3-202ENST00000443430 C9orf118A6NHY6 69 aa9.7□□□□□ -0.86
POLR2J3-202ENST00000443430 KRTAP20-1Q3LI63 56 aa9.7□□□□□ -0.86
POLR2J3-202ENST00000443430 C8orf17Q9NRJ1 99 aa9.68□□□□□ -0.86
POLR2J3-202ENST00000443430 A0A1W2PPM0 123 aa9.67□□□□□ -0.86
POLR2J3-202ENST00000443430 NREPQ16612 68 aa9.67□□□□□ -0.86
POLR2J3-202ENST00000443430 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
POLR2J3-202ENST00000443430 H3BT86 120 aa9.65□□□□□ -0.86
POLR2J3-202ENST00000443430 PRR15Q8IV56 129 aa9.6□□□□□ -0.87
POLR2J3-202ENST00000443430 Q6ZVQ6 151 aa9.59□□□□□ -0.87
POLR2J3-202ENST00000443430 A6NN06 94 aa9.57□□□□□ -0.88
POLR2J3-202ENST00000443430 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
POLR2J3-202ENST00000443430 COL5A1-AS1Q5SY13 56 aa9.56□□□□□ -0.88
POLR2J3-202ENST00000443430 SPCS1Q9Y6A9 102 aa9.56□□□□□ -0.88
POLR2J3-202ENST00000443430 MMP24-AS1A0A0U1RRL7 71 aa9.53□□□□□ -0.88
POLR2J3-202ENST00000443430 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
POLR2J3-202ENST00000443430 K7EQZ3 153 aa9.52□□□□□ -0.89
POLR2J3-202ENST00000443430 TMEM254Q8TBM7 123 aa9.51□□□□□ -0.89
POLR2J3-202ENST00000443430 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
POLR2J3-202ENST00000443430 MDN1Q9NU22 5596 aa9.51□□□□□ -0.89
POLR2J3-202ENST00000443430 BPY2O14599 106 aa9.49□□□□□ -0.89
POLR2J3-202ENST00000443430 NDUFS5O43920 106 aa9.49□□□□□ -0.89
POLR2J3-202ENST00000443430 KMT2DO14686 5537 aa9.49□□□□□ -0.89
POLR2J3-202ENST00000443430 hDV103S1A0JD37 113 aa9.48□□□□□ -0.89
POLR2J3-202ENST00000443430 MT1BP07438 61 aa9.47□□□□□ -0.89
POLR2J3-202ENST00000443430 KRTAP5-9P26371 169 aa9.46□□□□□ -0.9
POLR2J3-202ENST00000443430 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
POLR2J3-202ENST00000443430 PRO0461Q9UI25 63 aa9.43□□□□□ -0.9
POLR2J3-202ENST00000443430 K7EP34 96 aa9.41□□□□□ -0.9
POLR2J3-202ENST00000443430 Q8N9L7 120 aa9.41□□□□□ -0.9
POLR2J3-202ENST00000443430 Q5VV11 94 aa9.38□□□□□ -0.91
POLR2J3-202ENST00000443430 KRTAP10-5P60370 271 aa9.36□□□□□ -0.91
POLR2J3-202ENST00000443430 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
POLR2J3-202ENST00000443430 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
POLR2J3-202ENST00000443430 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
POLR2J3-202ENST00000443430 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
POLR2J3-202ENST00000443430 UBL5Q9BZL1 73 aa9.33□□□□□ -0.92
POLR2J3-202ENST00000443430 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
POLR2J3-202ENST00000443430 Q5W150 140 aa9.31□□□□□ -0.92
POLR2J3-202ENST00000443430 FAM236AA0A1B0GUQ0 79 aa9.3□□□□□ -0.92
POLR2J3-202ENST00000443430 FAM236BA0A1B0GV22 79 aa9.3□□□□□ -0.92
POLR2J3-202ENST00000443430 KRTAP2-3P0C7H8 128 aa9.29□□□□□ -0.92
POLR2J3-202ENST00000443430 SPRR2GQ9BYE4 73 aa9.29□□□□□ -0.92
POLR2J3-202ENST00000443430 KRTAP2-4Q9BYR9 128 aa9.29□□□□□ -0.92
POLR2J3-202ENST00000443430 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
POLR2J3-202ENST00000443430 GTF2H5Q6ZYL4 71 aa9.27□□□□□ -0.93
POLR2J3-202ENST00000443430 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
POLR2J3-202ENST00000443430 F8W1H4 67 aa9.22□□□□□ -0.93
POLR2J3-202ENST00000443430 CXCL6P80162 114 aa9.22□□□□□ -0.93
POLR2J3-202ENST00000443430 C4orf26Q17RF5 130 aa9.18□□□□□ -0.94
POLR2J3-202ENST00000443430 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
POLR2J3-202ENST00000443430 A0A1B0GV90 55 aa9.12□□□□□ -0.95
POLR2J3-202ENST00000443430 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
POLR2J3-202ENST00000443430 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
POLR2J3-202ENST00000443430 S4R3F8 94 aa9.06□□□□□ -0.96
POLR2J3-202ENST00000443430 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 251.9 ms