RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
CPSF4-206ENST00000441580 LRP1BQ9NZR2 4599 aa7.64□□□□□ -1.19
CPSF4-206ENST00000441580 DYNC1H1Q14204 4646 aaKnown RBP7.64□□□□□ -1.19
CPSF4-206ENST00000441580 SPINK1P00995 79 aa7.63□□□□□ -1.19
CPSF4-206ENST00000441580 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
CPSF4-206ENST00000441580 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
CPSF4-206ENST00000441580 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
CPSF4-206ENST00000441580 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
CPSF4-206ENST00000441580 MRPL34Q9BQ48 92 aaKnown RBP7.61□□□□□ -1.19
CPSF4-206ENST00000441580 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
CPSF4-206ENST00000441580 TRAV22A0A0B4J277 110 aa7.59□□□□□ -1.19
CPSF4-206ENST00000441580 H0Y9P7 68 aa7.59□□□□□ -1.19
CPSF4-206ENST00000441580 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
CPSF4-206ENST00000441580 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
CPSF4-206ENST00000441580 PKHD1P08F94 4074 aa7.57□□□□□ -1.2
CPSF4-206ENST00000441580 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
CPSF4-206ENST00000441580 VPS13BQ7Z7G8 4022 aa7.56□□□□□ -1.2
CPSF4-206ENST00000441580 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
CPSF4-206ENST00000441580 NDUFS5O43920 106 aa7.54□□□□□ -1.2
CPSF4-206ENST00000441580 RPS28P62857 69 aaKnown RBP7.54□□□□□ -1.2
CPSF4-206ENST00000441580 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
CPSF4-206ENST00000441580 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
CPSF4-206ENST00000441580 LINC00313P59037 77 aa7.51□□□□□ -1.21
CPSF4-206ENST00000441580 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
CPSF4-206ENST00000441580 NOTCH2NLQ7Z3S9 236 aa7.5□□□□□ -1.21
CPSF4-206ENST00000441580 KMT2CQ8NEZ4 4911 aaKnown RBP7.49□□□□□ -1.21
CPSF4-206ENST00000441580 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
CPSF4-206ENST00000441580 Q5VSD8 79 aa7.48□□□□□ -1.21
CPSF4-206ENST00000441580 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
CPSF4-206ENST00000441580 Q8N9P0 234 aaPredicted RBP7.45□□□□□ -1.22
CPSF4-206ENST00000441580 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
CPSF4-206ENST00000441580 LOC101927531A0A1B0GV80 90 aa7.44□□□□□ -1.22
CPSF4-206ENST00000441580 KRTAP16-1A8MUX0 517 aa7.43□□□□□ -1.22
CPSF4-206ENST00000441580 CYP4F30PQ9H0H9 118 aa7.42□□□□□ -1.22
CPSF4-206ENST00000441580 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
CPSF4-206ENST00000441580 OXTP01178 125 aa7.37□□□□□ -1.23
CPSF4-206ENST00000441580 Q5W150 140 aa7.34□□□□□ -1.23
CPSF4-206ENST00000441580 IGLV7-46A0A075B6I9 117 aa7.33□□□□□ -1.24
CPSF4-206ENST00000441580 Q8N1X5 172 aa7.33□□□□□ -1.24
CPSF4-206ENST00000441580 FAT1Q14517 4588 aa7.33□□□□□ -1.24
CPSF4-206ENST00000441580 RYR3Q15413 4870 aa7.33□□□□□ -1.24
CPSF4-206ENST00000441580 RYR1P21817 5038 aa7.33□□□□□ -1.24
CPSF4-206ENST00000441580 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
CPSF4-206ENST00000441580 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
CPSF4-206ENST00000441580 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
CPSF4-206ENST00000441580 PRR4Q16378 134 aa7.3□□□□□ -1.24
CPSF4-206ENST00000441580 IGKV2-30P06310 120 aa7.29□□□□□ -1.24
CPSF4-206ENST00000441580 FP248Q71RG6 208 aaPredicted RBP7.29□□□□□ -1.24
CPSF4-206ENST00000441580 HSPG2P98160 4391 aa7.29□□□□□ -1.24
CPSF4-206ENST00000441580 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
CPSF4-206ENST00000441580 A8MUU9 505 aa7.25□□□□□ -1.25
CPSF4-206ENST00000441580 RETNLBQ9BQ08 111 aa7.25□□□□□ -1.25
CPSF4-206ENST00000441580 FLG2Q5D862 2391 aaPredicted RBP7.23□□□□□ -1.25
CPSF4-206ENST00000441580 C9orf92A6NGG3 77 aa7.22□□□□□ -1.25
CPSF4-206ENST00000441580 C7orf65Q6ZTY9 151 aa7.22□□□□□ -1.25
CPSF4-206ENST00000441580 COA5Q86WW8 74 aa7.2□□□□□ -1.26
CPSF4-206ENST00000441580 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
CPSF4-206ENST00000441580 HRES1P13985 223 aa7.19□□□□□ -1.26
CPSF4-206ENST00000441580 Q75L30 129 aa7.19□□□□□ -1.26
CPSF4-206ENST00000441580 DMAC1Q96GE9 116 aa7.18□□□□□ -1.26
CPSF4-206ENST00000441580 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
CPSF4-206ENST00000441580 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
CPSF4-206ENST00000441580 V9GYY9 64 aa7.15□□□□□ -1.26
CPSF4-206ENST00000441580 TNXBP22105 4242 aa7.15□□□□□ -1.27
CPSF4-206ENST00000441580 KIAA1109Q2LD37 5005 aa7.13□□□□□ -1.27
CPSF4-206ENST00000441580 ACYP2P14621 99 aa7.13□□□□□ -1.27
CPSF4-206ENST00000441580 Q1T7F1 81 aa7.12□□□□□ -1.27
CPSF4-206ENST00000441580 MPLKIPQ8TAP9 179 aa7.11□□□□□ -1.27
CPSF4-206ENST00000441580 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
CPSF4-206ENST00000441580 A8MUN3 132 aa7.08□□□□□ -1.28
CPSF4-206ENST00000441580 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
CPSF4-206ENST00000441580 EPPK1P58107 5090 aaKnown RBP7.07□□□□□ -1.28
CPSF4-206ENST00000441580 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
CPSF4-206ENST00000441580 CHKB-CPT1BH3BT56 60 aa7.06□□□□□ -1.28
CPSF4-206ENST00000441580 ATP11AUNQ6ZP68 121 aa7.05□□□□□ -1.28
CPSF4-206ENST00000441580 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
CPSF4-206ENST00000441580 XP32Q5T750 250 aa7.04□□□□□ -1.28
CPSF4-206ENST00000441580 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
CPSF4-206ENST00000441580 SPINK7P58062 85 aa7.01□□□□□ -1.29
CPSF4-206ENST00000441580 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
CPSF4-206ENST00000441580 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
CPSF4-206ENST00000441580 DMBT1Q9UGM3 2413 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-206ENST00000441580 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
CPSF4-206ENST00000441580 PSPHP1O15172 72 aa6.94□□□□□ -1.3
CPSF4-206ENST00000441580 J3QL48 77 aa6.92□□□□□ -1.3
CPSF4-206ENST00000441580 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
CPSF4-206ENST00000441580 COX6B2Q6YFQ2 88 aa6.91□□□□□ -1.3
CPSF4-206ENST00000441580 Q5VV11 94 aa6.9□□□□□ -1.3
CPSF4-206ENST00000441580 MYCBP2O75592 4640 aa6.9□□□□□ -1.31
CPSF4-206ENST00000441580 BIRC6Q9NR09 4857 aa6.9□□□□□ -1.31
CPSF4-206ENST00000441580 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
CPSF4-206ENST00000441580 HERC2O95714 4834 aa6.83□□□□□ -1.32
CPSF4-206ENST00000441580 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
CPSF4-206ENST00000441580 PRO0628Q9UI54 55 aa6.82□□□□□ -1.32
CPSF4-206ENST00000441580 A0A1B0GU69 56 aa6.81□□□□□ -1.32
CPSF4-206ENST00000441580 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
CPSF4-206ENST00000441580 A6NED7 52 aa6.78□□□□□ -1.32
CPSF4-206ENST00000441580 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
CPSF4-206ENST00000441580 SEC61GP60059 68 aa6.75□□□□□ -1.33
CPSF4-206ENST00000441580 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms