RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 SPANXA2-OT1Q8N9U9 137 aa11.07□□□□□ -0.64
LRCH3-207ENST00000441090 KRTAP10-1P60331 282 aa11.06□□□□□ -0.64
LRCH3-207ENST00000441090 MRPL34Q9BQ48 92 aaKnown RBP11.04□□□□□ -0.64
LRCH3-207ENST00000441090 KRTAP21-3Q3LHN1 58 aa11.03□□□□□ -0.64
LRCH3-207ENST00000441090 A0A087X002 238 aa11.02□□□□□ -0.65
LRCH3-207ENST00000441090 NOTCH2NLQ7Z3S9 236 aa11.02□□□□□ -0.65
LRCH3-207ENST00000441090 MPLKIPQ8TAP9 179 aa11.02□□□□□ -0.65
LRCH3-207ENST00000441090 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
LRCH3-207ENST00000441090 LRP1BQ9NZR2 4599 aa11□□□□□ -0.65
LRCH3-207ENST00000441090 NDUFS5O43920 106 aa10.99□□□□□ -0.65
LRCH3-207ENST00000441090 KRTAP13-2Q52LG2 175 aa10.96□□□□□ -0.66
LRCH3-207ENST00000441090 LINC00336Q6ZUF6 198 aa10.92□□□□□ -0.66
LRCH3-207ENST00000441090 VPS13BQ7Z7G8 4022 aa10.92□□□□□ -0.66
LRCH3-207ENST00000441090 IGLV7-46A0A075B6I9 117 aa10.92□□□□□ -0.66
LRCH3-207ENST00000441090 Q1T7F1 81 aa10.92□□□□□ -0.66
LRCH3-207ENST00000441090 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
LRCH3-207ENST00000441090 PCOTHQ58A44 107 aa10.9□□□□□ -0.66
LRCH3-207ENST00000441090 KRTAP1-4P0C5Y4 121 aa10.89□□□□□ -0.67
LRCH3-207ENST00000441090 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
LRCH3-207ENST00000441090 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
LRCH3-207ENST00000441090 Q5W150 140 aa10.82□□□□□ -0.68
LRCH3-207ENST00000441090 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
LRCH3-207ENST00000441090 LINC00313P59037 77 aa10.81□□□□□ -0.68
LRCH3-207ENST00000441090 SACSQ9NZJ4 4579 aa10.81□□□□□ -0.68
LRCH3-207ENST00000441090 PRO0628Q9UI54 55 aa10.79□□□□□ -0.68
LRCH3-207ENST00000441090 PKHD1P08F94 4074 aa10.79□□□□□ -0.68
LRCH3-207ENST00000441090 COA5Q86WW8 74 aa10.79□□□□□ -0.68
LRCH3-207ENST00000441090 LIMD2Q9BT23 127 aa10.79□□□□□ -0.68
LRCH3-207ENST00000441090 V9GYY9 64 aa10.79□□□□□ -0.68
LRCH3-207ENST00000441090 PLA2G1BP04054 148 aaKnown RBP10.76□□□□□ -0.69
LRCH3-207ENST00000441090 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-207ENST00000441090 BRK1Q8WUW1 75 aa10.74□□□□□ -0.69
LRCH3-207ENST00000441090 PSPHP1O15172 72 aa10.73□□□□□ -0.69
LRCH3-207ENST00000441090 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
LRCH3-207ENST00000441090 C4orf48Q5BLP8 95 aa10.7□□□□□ -0.7
LRCH3-207ENST00000441090 KRTAP16-1A8MUX0 517 aa10.7□□□□□ -0.7
LRCH3-207ENST00000441090 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
LRCH3-207ENST00000441090 SPINK1P00995 79 aa10.68□□□□□ -0.7
LRCH3-207ENST00000441090 A8MUN3 132 aa10.67□□□□□ -0.7
LRCH3-207ENST00000441090 HRES1P13985 223 aa10.65□□□□□ -0.7
LRCH3-207ENST00000441090 DYNC1H1Q14204 4646 aaKnown RBP10.65□□□□□ -0.71
LRCH3-207ENST00000441090 Q5VV11 94 aa10.62□□□□□ -0.71
LRCH3-207ENST00000441090 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
LRCH3-207ENST00000441090 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
LRCH3-207ENST00000441090 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
LRCH3-207ENST00000441090 IGKV2-30P06310 120 aa10.59□□□□□ -0.71
LRCH3-207ENST00000441090 RPS29P62273 56 aaKnown RBP10.58□□□□□ -0.72
LRCH3-207ENST00000441090 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
LRCH3-207ENST00000441090 PRR15LQ9BU68 103 aa10.58□□□□□ -0.72
LRCH3-207ENST00000441090 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-207ENST00000441090 SPAG11AQ6PDA7 123 aa10.55□□□□□ -0.72
LRCH3-207ENST00000441090 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
LRCH3-207ENST00000441090 ACYP2P14621 99 aa10.53□□□□□ -0.72
LRCH3-207ENST00000441090 LINC01558Q9Y6Z2 57 aa10.53□□□□□ -0.72
LRCH3-207ENST00000441090 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
LRCH3-207ENST00000441090 KRTAP10-4P60372 401 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-207ENST00000441090 Q75L30 129 aa10.5□□□□□ -0.73
LRCH3-207ENST00000441090 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
LRCH3-207ENST00000441090 PKHD1L1Q86WI1 4243 aa10.49□□□□□ -0.73
LRCH3-207ENST00000441090 RYR2Q92736 4967 aa10.48□□□□□ -0.73
LRCH3-207ENST00000441090 FAT1Q14517 4588 aa10.47□□□□□ -0.73
LRCH3-207ENST00000441090 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
LRCH3-207ENST00000441090 A8MU10 97 aa10.37□□□□□ -0.75
LRCH3-207ENST00000441090 A6NED7 52 aa10.36□□□□□ -0.75
LRCH3-207ENST00000441090 KMT2CQ8NEZ4 4911 aaKnown RBP10.34□□□□□ -0.75
LRCH3-207ENST00000441090 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
LRCH3-207ENST00000441090 LCA10Q71F78 164 aa10.31□□□□□ -0.76
LRCH3-207ENST00000441090 C20orf166-AS1Q96NR2 134 aa10.29□□□□□ -0.76
LRCH3-207ENST00000441090 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
LRCH3-207ENST00000441090 A8MUU9 505 aa10.28□□□□□ -0.76
LRCH3-207ENST00000441090 CDC42SE1Q9NRR8 79 aa10.27□□□□□ -0.77
LRCH3-207ENST00000441090 SPINK7P58062 85 aa10.25□□□□□ -0.77
LRCH3-207ENST00000441090 ATP11AUNQ6ZP68 121 aa10.2□□□□□ -0.78
LRCH3-207ENST00000441090 FLG2Q5D862 2391 aaPredicted RBP10.19□□□□□ -0.78
LRCH3-207ENST00000441090 A0A1B0GU69 56 aa10.17□□□□□ -0.78
LRCH3-207ENST00000441090 Q8N1X5 172 aa10.16□□□□□ -0.78
LRCH3-207ENST00000441090 TNXBP22105 4242 aa10.16□□□□□ -0.78
LRCH3-207ENST00000441090 SPTSSBQ8NFR3 76 aa10.16□□□□□ -0.78
LRCH3-207ENST00000441090 PMAIP1Q13794 54 aa10.15□□□□□ -0.78
LRCH3-207ENST00000441090 HSPG2P98160 4391 aa10.13□□□□□ -0.79
LRCH3-207ENST00000441090 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
LRCH3-207ENST00000441090 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
LRCH3-207ENST00000441090 Q5VSD8 79 aa10.09□□□□□ -0.79
LRCH3-207ENST00000441090 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
LRCH3-207ENST00000441090 RYR3Q15413 4870 aa10.03□□□□□ -0.8
LRCH3-207ENST00000441090 A6NN06 94 aa10.02□□□□□ -0.81
LRCH3-207ENST00000441090 RYR1P21817 5038 aa10.02□□□□□ -0.81
LRCH3-207ENST00000441090 KRTAP3-1Q9BYR8 98 aa10.01□□□□□ -0.81
LRCH3-207ENST00000441090 UQCR11O14957 56 aa9.97□□□□□ -0.81
LRCH3-207ENST00000441090 SPATA8Q6RVD6 105 aa9.97□□□□□ -0.81
LRCH3-207ENST00000441090 MIR22HGQ0VDD5 57 aa9.92□□□□□ -0.82
LRCH3-207ENST00000441090 KTN1-AS1Q86SY8 53 aa9.92□□□□□ -0.82
LRCH3-207ENST00000441090 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
LRCH3-207ENST00000441090 SEC61GP60059 68 aa9.9□□□□□ -0.82
LRCH3-207ENST00000441090 COX6B2Q6YFQ2 88 aa9.9□□□□□ -0.82
LRCH3-207ENST00000441090 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
LRCH3-207ENST00000441090 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
LRCH3-207ENST00000441090 XP32Q5T750 250 aa9.83□□□□□ -0.84
LRCH3-207ENST00000441090 KIAA1109Q2LD37 5005 aa9.82□□□□□ -0.84
LRCH3-207ENST00000441090 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms