RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 CIRBP-AS1Q8TBR5 109 aa4.87□□□□□ -1.63
SPIRE1-204ENST00000440472 C8orf17Q9NRJ1 99 aa4.87□□□□□ -1.63
SPIRE1-204ENST00000440472 TRAV22A0A0B4J277 110 aa4.86□□□□□ -1.63
SPIRE1-204ENST00000440472 H0Y9P7 68 aa4.85□□□□□ -1.63
SPIRE1-204ENST00000440472 CDK2AP2O75956 126 aa4.84□□□□□ -1.64
SPIRE1-204ENST00000440472 PRO0628Q9UI54 55 aa4.84□□□□□ -1.64
SPIRE1-204ENST00000440472 C4orf26Q17RF5 130 aa4.83□□□□□ -1.64
SPIRE1-204ENST00000440472 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
SPIRE1-204ENST00000440472 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
SPIRE1-204ENST00000440472 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
SPIRE1-204ENST00000440472 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
SPIRE1-204ENST00000440472 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
SPIRE1-204ENST00000440472 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
SPIRE1-204ENST00000440472 ANAPC11Q9NYG5 84 aa4.81□□□□□ -1.64
SPIRE1-204ENST00000440472 LRP1BQ9NZR2 4599 aa4.81□□□□□ -1.64
SPIRE1-204ENST00000440472 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
SPIRE1-204ENST00000440472 SACSQ9NZJ4 4579 aa4.8□□□□□ -1.64
SPIRE1-204ENST00000440472 IGHV6-1A0A0B4J1U7 121 aa4.78□□□□□ -1.64
SPIRE1-204ENST00000440472 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
SPIRE1-204ENST00000440472 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
SPIRE1-204ENST00000440472 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
SPIRE1-204ENST00000440472 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
SPIRE1-204ENST00000440472 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
SPIRE1-204ENST00000440472 KRTAP13-2Q52LG2 175 aa4.77□□□□□ -1.65
SPIRE1-204ENST00000440472 Q1T7F1 81 aa4.76□□□□□ -1.65
SPIRE1-204ENST00000440472 A0A087X002 238 aa4.75□□□□□ -1.65
SPIRE1-204ENST00000440472 LIMD2Q9BT23 127 aa4.75□□□□□ -1.65
SPIRE1-204ENST00000440472 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
SPIRE1-204ENST00000440472 VPS13BQ7Z7G8 4022 aa4.74□□□□□ -1.65
SPIRE1-204ENST00000440472 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
SPIRE1-204ENST00000440472 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
SPIRE1-204ENST00000440472 DYNC1H1Q14204 4646 aaKnown RBP4.74□□□□□ -1.65
SPIRE1-204ENST00000440472 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
SPIRE1-204ENST00000440472 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
SPIRE1-204ENST00000440472 V9GYY9 64 aa4.73□□□□□ -1.65
SPIRE1-204ENST00000440472 SPINK6Q6UWN8 80 aa4.73□□□□□ -1.65
SPIRE1-204ENST00000440472 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
SPIRE1-204ENST00000440472 NDUFS5O43920 106 aa4.71□□□□□ -1.66
SPIRE1-204ENST00000440472 SPINK1P00995 79 aa4.71□□□□□ -1.66
SPIRE1-204ENST00000440472 LINC00313P59037 77 aa4.71□□□□□ -1.66
SPIRE1-204ENST00000440472 A0A1B0GVY2 172 aa4.69□□□□□ -1.66
SPIRE1-204ENST00000440472 FAM229AH3BQW9 127 aa4.69□□□□□ -1.66
SPIRE1-204ENST00000440472 SPAG11AQ6PDA7 123 aa4.69□□□□□ -1.66
SPIRE1-204ENST00000440472 KRTAP16-1A8MUX0 517 aa4.68□□□□□ -1.66
SPIRE1-204ENST00000440472 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
SPIRE1-204ENST00000440472 PRR4Q16378 134 aa4.67□□□□□ -1.66
SPIRE1-204ENST00000440472 C4orf48Q5BLP8 95 aa4.67□□□□□ -1.66
SPIRE1-204ENST00000440472 Q5W150 140 aa4.67□□□□□ -1.66
SPIRE1-204ENST00000440472 TYMSOSQ8TAI1 123 aa4.67□□□□□ -1.66
SPIRE1-204ENST00000440472 PKHD1L1Q86WI1 4243 aa4.67□□□□□ -1.66
SPIRE1-204ENST00000440472 APOBP04114 4563 aaKnown RBP4.66□□□□□ -1.66
SPIRE1-204ENST00000440472 COA5Q86WW8 74 aa4.66□□□□□ -1.66
SPIRE1-204ENST00000440472 MPLKIPQ8TAP9 179 aa4.66□□□□□ -1.66
SPIRE1-204ENST00000440472 PCOTHQ58A44 107 aa4.65□□□□□ -1.67
SPIRE1-204ENST00000440472 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
SPIRE1-204ENST00000440472 PKHD1P08F94 4074 aa4.64□□□□□ -1.67
SPIRE1-204ENST00000440472 IGKV2-30P06310 120 aa4.63□□□□□ -1.67
SPIRE1-204ENST00000440472 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
SPIRE1-204ENST00000440472 LINC00304Q8N9R0 145 aa4.63□□□□□ -1.67
SPIRE1-204ENST00000440472 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
SPIRE1-204ENST00000440472 SEC61GP60059 68 aa4.61□□□□□ -1.67
SPIRE1-204ENST00000440472 KRTAP9-2Q9BYQ4 174 aa4.61□□□□□ -1.67
SPIRE1-204ENST00000440472 HERC1Q15751 4861 aa4.61□□□□□ -1.67
SPIRE1-204ENST00000440472 HRES1P13985 223 aa4.61□□□□□ -1.67
SPIRE1-204ENST00000440472 PRR26Q8N8Z3 221 aa4.6□□□□□ -1.67
SPIRE1-204ENST00000440472 DMAC1Q96GE9 116 aa4.6□□□□□ -1.67
SPIRE1-204ENST00000440472 ACYP2P14621 99 aa4.6□□□□□ -1.67
SPIRE1-204ENST00000440472 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
SPIRE1-204ENST00000440472 Q5VV11 94 aa4.58□□□□□ -1.68
SPIRE1-204ENST00000440472 Q75L30 129 aa4.57□□□□□ -1.68
SPIRE1-204ENST00000440472 A8MUN3 132 aa4.57□□□□□ -1.68
SPIRE1-204ENST00000440472 FAT1Q14517 4588 aa4.56□□□□□ -1.68
SPIRE1-204ENST00000440472 PSPHP1O15172 72 aa4.55□□□□□ -1.68
SPIRE1-204ENST00000440472 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
SPIRE1-204ENST00000440472 A8MUU9 505 aa4.54□□□□□ -1.68
SPIRE1-204ENST00000440472 SMR3BP02814 79 aaPredicted RBP4.54□□□□□ -1.68
SPIRE1-204ENST00000440472 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
SPIRE1-204ENST00000440472 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
SPIRE1-204ENST00000440472 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
SPIRE1-204ENST00000440472 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
SPIRE1-204ENST00000440472 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
SPIRE1-204ENST00000440472 RETNLBQ9BQ08 111 aa4.49□□□□□ -1.69
SPIRE1-204ENST00000440472 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
SPIRE1-204ENST00000440472 TNXBP22105 4242 aa4.47□□□□□ -1.69
SPIRE1-204ENST00000440472 KRTAP10-8P60410 259 aa4.47□□□□□ -1.69
SPIRE1-204ENST00000440472 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.69
SPIRE1-204ENST00000440472 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.7
SPIRE1-204ENST00000440472 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
SPIRE1-204ENST00000440472 HSPG2P98160 4391 aa4.45□□□□□ -1.7
SPIRE1-204ENST00000440472 A6NED7 52 aa4.43□□□□□ -1.7
SPIRE1-204ENST00000440472 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
SPIRE1-204ENST00000440472 LCA10Q71F78 164 aa4.43□□□□□ -1.7
SPIRE1-204ENST00000440472 FLG2Q5D862 2391 aaPredicted RBP4.43□□□□□ -1.7
SPIRE1-204ENST00000440472 C9orf92A6NGG3 77 aa4.4□□□□□ -1.7
SPIRE1-204ENST00000440472 Q5VSD8 79 aa4.4□□□□□ -1.7
SPIRE1-204ENST00000440472 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.7
SPIRE1-204ENST00000440472 Q8N1X5 172 aa4.4□□□□□ -1.7
SPIRE1-204ENST00000440472 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.7
SPIRE1-204ENST00000440472 A0A1B0GU69 56 aa4.39□□□□□ -1.71
SPIRE1-204ENST00000440472 SPINK7P58062 85 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms