RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 K7EIM0 57 aa0.83□□□□□ -2.28
CHEK2-217ENST00000439346 TMEM167AQ8TBQ9 72 aa0.83□□□□□ -2.28
CHEK2-217ENST00000439346 PTPN13Q12923 2485 aa0.82□□□□□ -2.28
CHEK2-217ENST00000439346 WNK1Q9H4A3 2382 aa0.82□□□□□ -2.28
CHEK2-217ENST00000439346 DEFB110Q30KQ9 67 aa0.82□□□□□ -2.28
CHEK2-217ENST00000439346 TNXBP22105 4242 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 CHD7Q9P2D1 2997 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 CELSR1Q9NYQ6 3014 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 ACACAQ13085 2346 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 NBASA2RRP1 2371 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 DEFB104AQ8WTQ1 72 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 NAV2Q8IVL1 2488 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 COL6A5A8TX70 2615 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 UNC79Q9P2D8 2635 aa0.81□□□□□ -2.28
CHEK2-217ENST00000439346 OTOGQ6ZRI0 2925 aa0.8□□□□□ -2.28
CHEK2-217ENST00000439346 SPART-AS1P0CW21 52 aa0.8□□□□□ -2.28
CHEK2-217ENST00000439346 TNRC18O15417 2968 aaPredicted RBP0.8□□□□□ -2.28
CHEK2-217ENST00000439346 ZFYVE26Q68DK2 2539 aa0.79□□□□□ -2.28
CHEK2-217ENST00000439346 HIVEP3Q5T1R4 2406 aa0.79□□□□□ -2.28
CHEK2-217ENST00000439346 LYSTQ99698 3801 aa0.79□□□□□ -2.28
CHEK2-217ENST00000439346 CCDC168Q8NDH2 2452 aa0.78□□□□□ -2.28
CHEK2-217ENST00000439346 VPS13BQ7Z7G8 4022 aa0.78□□□□□ -2.28
CHEK2-217ENST00000439346 NOTCH1P46531 2555 aa0.78□□□□□ -2.28
CHEK2-217ENST00000439346 MAP1BP46821 2468 aaKnown RBP0.77□□□□□ -2.29
CHEK2-217ENST00000439346 FAT2Q9NYQ8 4349 aa0.77□□□□□ -2.29
CHEK2-217ENST00000439346 SPRR2DP22532 72 aa0.76□□□□□ -2.29
CHEK2-217ENST00000439346 RPL39P5Q59GN2 51 aa0.76□□□□□ -2.29
CHEK2-217ENST00000439346 SETD2Q9BYW2 2564 aaPredicted RBP0.76□□□□□ -2.29
CHEK2-217ENST00000439346 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CHEK2-217ENST00000439346 TENM2Q9NT68 2774 aa0.75□□□□□ -2.29
CHEK2-217ENST00000439346 SPTBN4Q9H254 2564 aa0.75□□□□□ -2.29
CHEK2-217ENST00000439346 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
CHEK2-217ENST00000439346 FRYQ5TBA9 3013 aa0.74□□□□□ -2.29
CHEK2-217ENST00000439346 DMBT1Q9UGM3 2413 aaPredicted RBP0.74□□□□□ -2.29
CHEK2-217ENST00000439346 MTORP42345 2549 aa0.74□□□□□ -2.29
CHEK2-217ENST00000439346 NF1P21359 2839 aa0.74□□□□□ -2.29
CHEK2-217ENST00000439346 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
CHEK2-217ENST00000439346 GCN1Q92616 2671 aaKnown RBP0.73□□□□□ -2.29
CHEK2-217ENST00000439346 ZZEF1O43149 2961 aa0.73□□□□□ -2.29
CHEK2-217ENST00000439346 DNAH3Q8TD57 4116 aa0.73□□□□□ -2.29
CHEK2-217ENST00000439346 DEFB108AA8MXU0 73 aa0.73□□□□□ -2.29
CHEK2-217ENST00000439346 H3BUX3 64 aa0.73□□□□□ -2.29
CHEK2-217ENST00000439346 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
CHEK2-217ENST00000439346 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
CHEK2-217ENST00000439346 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 APC2O95996 2303 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 DNAH11Q96DT5 4516 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 RIF1Q5UIP0 2472 aaKnown RBP0.72□□□□□ -2.29
CHEK2-217ENST00000439346 FLNCQ14315 2725 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 RHPN1-AS1Q9BWJ2 59 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 FAM186AA6NE01 2351 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 PDZD2O15018 2839 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 LRRK2Q5S007 2527 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 ACANP16112 2415 aa0.72□□□□□ -2.29
CHEK2-217ENST00000439346 SETXQ7Z333 2677 aaKnown RBP0.71□□□□□ -2.29
CHEK2-217ENST00000439346 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
CHEK2-217ENST00000439346 EPG5Q9HCE0 2579 aa0.71□□□□□ -2.3
CHEK2-217ENST00000439346 SACSQ9NZJ4 4579 aa0.71□□□□□ -2.3
CHEK2-217ENST00000439346 NBPF19A0A087WUL8 3843 aa0.7□□□□□ -2.3
CHEK2-217ENST00000439346 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
CHEK2-217ENST00000439346 SPRR2BP35325 72 aa0.7□□□□□ -2.3
CHEK2-217ENST00000439346 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
CHEK2-217ENST00000439346 COL12A1Q99715 3063 aa0.69□□□□□ -2.3
CHEK2-217ENST00000439346 NCOR2Q9Y618 2525 aa0.69□□□□□ -2.3
CHEK2-217ENST00000439346 VPS13DQ5THJ4 4388 aa0.68□□□□□ -2.3
CHEK2-217ENST00000439346 DCHS2Q6V1P9 2916 aa0.68□□□□□ -2.3
CHEK2-217ENST00000439346 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
CHEK2-217ENST00000439346 SPENQ96T58 3664 aaKnown RBP0.67□□□□□ -2.3
CHEK2-217ENST00000439346 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
CHEK2-217ENST00000439346 PKD1P98161 4303 aa0.66□□□□□ -2.3
CHEK2-217ENST00000439346 DYNC2H1Q8NCM8 4307 aaKnown RBP0.66□□□□□ -2.3
CHEK2-217ENST00000439346 CEP250Q9BV73 2442 aa0.66□□□□□ -2.3
CHEK2-217ENST00000439346 UTP20O75691 2785 aaKnown RBP0.66□□□□□ -2.3
CHEK2-217ENST00000439346 TACC2O95359 2948 aa0.65□□□□□ -2.3
CHEK2-217ENST00000439346 DMXL1Q9Y485 3027 aa0.65□□□□□ -2.3
CHEK2-217ENST00000439346 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.3
CHEK2-217ENST00000439346 SPG11Q96JI7 2443 aa0.65□□□□□ -2.31
CHEK2-217ENST00000439346 ANKHD1Q8IWZ3 2542 aaKnown RBP0.65□□□□□ -2.31
CHEK2-217ENST00000439346 ZFHX4Q86UP3 3567 aa0.65□□□□□ -2.31
CHEK2-217ENST00000439346 ANKRD11Q6UB99 2663 aaPredicted RBP0.65□□□□□ -2.31
CHEK2-217ENST00000439346 AKAP9Q99996 3911 aa0.65□□□□□ -2.31
CHEK2-217ENST00000439346 ITPR3Q14573 2671 aa0.64□□□□□ -2.31
CHEK2-217ENST00000439346 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
CHEK2-217ENST00000439346 FLNBO75369 2602 aaKnown RBP0.64□□□□□ -2.31
CHEK2-217ENST00000439346 PKHD1L1Q86WI1 4243 aa0.64□□□□□ -2.31
CHEK2-217ENST00000439346 DNAH2Q9P225 4427 aa0.64□□□□□ -2.31
CHEK2-217ENST00000439346 NBEAL2Q6ZNJ1 2754 aa0.64□□□□□ -2.31
CHEK2-217ENST00000439346 ANK3Q12955 4377 aaKnown RBP0.64□□□□□ -2.31
CHEK2-217ENST00000439346 RANBP2P49792 3224 aaKnown RBP0.64□□□□□ -2.31
CHEK2-217ENST00000439346 ACACBO00763 2458 aa0.63□□□□□ -2.31
CHEK2-217ENST00000439346 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
CHEK2-217ENST00000439346 A0A096LNI7 61 aa0.63□□□□□ -2.31
CHEK2-217ENST00000439346 APELAP0DMC3 54 aa0.63□□□□□ -2.31
CHEK2-217ENST00000439346 DNAH6Q9C0G6 4158 aa0.63□□□□□ -2.31
CHEK2-217ENST00000439346 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
CHEK2-217ENST00000439346 CACNA1AO00555 2505 aa0.63□□□□□ -2.31
CHEK2-217ENST00000439346 NBEAQ8NFP9 2946 aa0.62□□□□□ -2.31
CHEK2-217ENST00000439346 HTN1P15515 57 aa0.62□□□□□ -2.31
CHEK2-217ENST00000439346 TLN2Q9Y4G6 2542 aa0.62□□□□□ -2.31
CHEK2-217ENST00000439346 CUBNO60494 3623 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms