RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 R4GN34 69 aa8.81□□□□□ -1
TSC2-206ENST00000439117 ZANQ9Y493 2812 aa8.8□□□□□ -1
TSC2-206ENST00000439117 PANO1I0J062 215 aa8.8□□□□□ -1
TSC2-206ENST00000439117 Q5VSD8 79 aa8.78□□□□□ -1
TSC2-206ENST00000439117 SPTBN5Q9NRC6 3674 aaKnown RBP8.78□□□□□ -1
TSC2-206ENST00000439117 A8MU10 97 aa8.78□□□□□ -1
TSC2-206ENST00000439117 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
TSC2-206ENST00000439117 CELSR2Q9HCU4 2923 aa8.75□□□□□ -1.01
TSC2-206ENST00000439117 ASH1LQ9NR48 2969 aaKnown RBP8.72□□□□□ -1.01
TSC2-206ENST00000439117 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
TSC2-206ENST00000439117 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
TSC2-206ENST00000439117 CFAP47Q6ZTR5 3102 aa8.68□□□□□ -1.02
TSC2-206ENST00000439117 USP34Q70CQ2 3546 aa8.67□□□□□ -1.02
TSC2-206ENST00000439117 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
TSC2-206ENST00000439117 CRYBG3Q68DQ2 2970 aa8.66□□□□□ -1.02
TSC2-206ENST00000439117 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
TSC2-206ENST00000439117 DCHS2Q6V1P9 2916 aa8.65□□□□□ -1.02
TSC2-206ENST00000439117 SPEGQ15772 3267 aa8.64□□□□□ -1.03
TSC2-206ENST00000439117 M0QZ58 72 aa8.63□□□□□ -1.03
TSC2-206ENST00000439117 HRNRQ86YZ3 2850 aaPredicted RBP8.62□□□□□ -1.03
TSC2-206ENST00000439117 LOC400499M0QZD8 3231 aa8.59□□□□□ -1.03
TSC2-206ENST00000439117 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
TSC2-206ENST00000439117 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
TSC2-206ENST00000439117 NF1P21359 2839 aa8.55□□□□□ -1.04
TSC2-206ENST00000439117 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
TSC2-206ENST00000439117 M0R2T5 61 aa8.54□□□□□ -1.04
TSC2-206ENST00000439117 A8MUU9 505 aa8.49□□□□□ -1.05
TSC2-206ENST00000439117 FBN2P35556 2912 aa8.49□□□□□ -1.05
TSC2-206ENST00000439117 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
TSC2-206ENST00000439117 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
TSC2-206ENST00000439117 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
TSC2-206ENST00000439117 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
TSC2-206ENST00000439117 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
TSC2-206ENST00000439117 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
TSC2-206ENST00000439117 MYO15AQ9UKN7 3530 aa8.31□□□□□ -1.08
TSC2-206ENST00000439117 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
TSC2-206ENST00000439117 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
TSC2-206ENST00000439117 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
TSC2-206ENST00000439117 RELNP78509 3460 aa8.21□□□□□ -1.1
TSC2-206ENST00000439117 CELSR1Q9NYQ6 3014 aa8.17□□□□□ -1.1
TSC2-206ENST00000439117 PP632Q6XCG6 107 aa8.15□□□□□ -1.1
TSC2-206ENST00000439117 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
TSC2-206ENST00000439117 H0YAA0 97 aa8.14□□□□□ -1.11
TSC2-206ENST00000439117 TNP1P09430 55 aa8.12□□□□□ -1.11
TSC2-206ENST00000439117 PDZD2O15018 2839 aa8.12□□□□□ -1.11
TSC2-206ENST00000439117 P0C880 135 aa8.11□□□□□ -1.11
TSC2-206ENST00000439117 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
TSC2-206ENST00000439117 PKD1L1Q8TDX9 2849 aa8.07□□□□□ -1.12
TSC2-206ENST00000439117 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
TSC2-206ENST00000439117 LAMA5O15230 3695 aa8.02□□□□□ -1.13
TSC2-206ENST00000439117 WDFY3Q8IZQ1 3526 aa8.01□□□□□ -1.13
TSC2-206ENST00000439117 MUC3AQ02505 3323 aa7.99□□□□□ -1.13
TSC2-206ENST00000439117 OTOGQ6ZRI0 2925 aa7.97□□□□□ -1.13
TSC2-206ENST00000439117 TGP01266 2768 aa7.92□□□□□ -1.14
TSC2-206ENST00000439117 FBN1P35555 2871 aaKnown RBP7.91□□□□□ -1.14
TSC2-206ENST00000439117 VWFP04275 2813 aa7.87□□□□□ -1.15
TSC2-206ENST00000439117 XP32Q5T750 250 aa7.87□□□□□ -1.15
TSC2-206ENST00000439117 ASPMQ8IZT6 3477 aa7.87□□□□□ -1.15
TSC2-206ENST00000439117 DMDP11532 3685 aa7.84□□□□□ -1.15
TSC2-206ENST00000439117 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
TSC2-206ENST00000439117 NBPF19A0A087WUL8 3843 aa7.82□□□□□ -1.16
TSC2-206ENST00000439117 ZFHX4Q86UP3 3567 aa7.82□□□□□ -1.16
TSC2-206ENST00000439117 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
TSC2-206ENST00000439117 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
TSC2-206ENST00000439117 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
TSC2-206ENST00000439117 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
TSC2-206ENST00000439117 SMG1Q96Q15 3661 aaKnown RBP7.64□□□□□ -1.19
TSC2-206ENST00000439117 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.2
TSC2-206ENST00000439117 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
TSC2-206ENST00000439117 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
TSC2-206ENST00000439117 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
TSC2-206ENST00000439117 CSMD2Q7Z408 3487 aa7.5□□□□□ -1.21
TSC2-206ENST00000439117 FBN3Q75N90 2809 aa7.45□□□□□ -1.22
TSC2-206ENST00000439117 KRTAP12-1P59990 96 aa7.43□□□□□ -1.22
TSC2-206ENST00000439117 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
TSC2-206ENST00000439117 SPENQ96T58 3664 aaKnown RBP7.42□□□□□ -1.22
TSC2-206ENST00000439117 SVEP1Q4LDE5 3571 aa7.41□□□□□ -1.22
TSC2-206ENST00000439117 KRTAP10-10P60014 251 aa7.4□□□□□ -1.23
TSC2-206ENST00000439117 TRRAPQ9Y4A5 3859 aa7.39□□□□□ -1.23
TSC2-206ENST00000439117 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.24
TSC2-206ENST00000439117 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
TSC2-206ENST00000439117 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
TSC2-206ENST00000439117 BSNQ9UPA5 3926 aa7.27□□□□□ -1.24
TSC2-206ENST00000439117 CUBNO60494 3623 aa7.27□□□□□ -1.25
TSC2-206ENST00000439117 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
TSC2-206ENST00000439117 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
TSC2-206ENST00000439117 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
TSC2-206ENST00000439117 INE1O15225 51 aa7.15□□□□□ -1.26
TSC2-206ENST00000439117 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
TSC2-206ENST00000439117 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
TSC2-206ENST00000439117 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
TSC2-206ENST00000439117 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
TSC2-206ENST00000439117 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
TSC2-206ENST00000439117 VPS13CQ709C8 3753 aa6.9□□□□□ -1.31
TSC2-206ENST00000439117 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
TSC2-206ENST00000439117 DNAH9Q9NYC9 4486 aa6.81□□□□□ -1.32
TSC2-206ENST00000439117 ZNF469Q96JG9 3925 aaPredicted RBP6.8□□□□□ -1.32
TSC2-206ENST00000439117 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
TSC2-206ENST00000439117 AKAP9Q99996 3911 aa6.74□□□□□ -1.33
TSC2-206ENST00000439117 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms