RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 A8MWP4 228 aa5.89□□□□□ -1.47
LINC01039-201ENST00000437113 IGHV6-1A0A0B4J1U7 121 aa5.88□□□□□ -1.47
LINC01039-201ENST00000437113 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
LINC01039-201ENST00000437113 K7EQZ3 153 aa5.87□□□□□ -1.47
LINC01039-201ENST00000437113 DSCR10P59022 87 aa5.87□□□□□ -1.47
LINC01039-201ENST00000437113 HIST1H4AP62805 103 aaKnown RBP5.87□□□□□ -1.47
LINC01039-201ENST00000437113 Q8N9L7 120 aa5.87□□□□□ -1.47
LINC01039-201ENST00000437113 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
LINC01039-201ENST00000437113 PRR15Q8IV56 129 aa5.85□□□□□ -1.47
LINC01039-201ENST00000437113 MT-ATP8P03928 68 aa5.84□□□□□ -1.47
LINC01039-201ENST00000437113 C8orf87E5RJ46 101 aa5.83□□□□□ -1.48
LINC01039-201ENST00000437113 LRP2P98164 4655 aa5.83□□□□□ -1.48
LINC01039-201ENST00000437113 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
LINC01039-201ENST00000437113 LINC00313P59037 77 aa5.82□□□□□ -1.48
LINC01039-201ENST00000437113 TPRXLQ17RH7 258 aa5.81□□□□□ -1.48
LINC01039-201ENST00000437113 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
LINC01039-201ENST00000437113 LPAP08519 4548 aa5.8□□□□□ -1.48
LINC01039-201ENST00000437113 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
LINC01039-201ENST00000437113 A0A087WVE0 104 aa5.79□□□□□ -1.48
LINC01039-201ENST00000437113 WFDC13Q8IUB5 93 aa5.79□□□□□ -1.48
LINC01039-201ENST00000437113 IMUPQ9GZP8 106 aa5.79□□□□□ -1.48
LINC01039-201ENST00000437113 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
LINC01039-201ENST00000437113 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
LINC01039-201ENST00000437113 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
LINC01039-201ENST00000437113 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
LINC01039-201ENST00000437113 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
LINC01039-201ENST00000437113 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
LINC01039-201ENST00000437113 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
LINC01039-201ENST00000437113 NDUFS5O43920 106 aa5.74□□□□□ -1.49
LINC01039-201ENST00000437113 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
LINC01039-201ENST00000437113 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
LINC01039-201ENST00000437113 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
LINC01039-201ENST00000437113 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
LINC01039-201ENST00000437113 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.5
LINC01039-201ENST00000437113 XP32Q5T750 250 aa5.71□□□□□ -1.5
LINC01039-201ENST00000437113 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
LINC01039-201ENST00000437113 Q75L30 129 aa5.67□□□□□ -1.5
LINC01039-201ENST00000437113 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
LINC01039-201ENST00000437113 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
LINC01039-201ENST00000437113 A8MUU9 505 aa5.66□□□□□ -1.5
LINC01039-201ENST00000437113 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
LINC01039-201ENST00000437113 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
LINC01039-201ENST00000437113 SEC61BP60468 96 aaKnown RBP5.65□□□□□ -1.5
LINC01039-201ENST00000437113 ATP11AUNQ6ZP68 121 aa5.65□□□□□ -1.5
LINC01039-201ENST00000437113 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.5
LINC01039-201ENST00000437113 ATOX1O00244 68 aa5.64□□□□□ -1.51
LINC01039-201ENST00000437113 SMIM20Q8N5G0 67 aa5.63□□□□□ -1.51
LINC01039-201ENST00000437113 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
LINC01039-201ENST00000437113 UQCRQO14949 82 aa5.61□□□□□ -1.51
LINC01039-201ENST00000437113 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
LINC01039-201ENST00000437113 TRAV22A0A0B4J277 110 aa5.59□□□□□ -1.51
LINC01039-201ENST00000437113 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
LINC01039-201ENST00000437113 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
LINC01039-201ENST00000437113 TRAV7A0A075B6U4 112 aa5.58□□□□□ -1.52
LINC01039-201ENST00000437113 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
LINC01039-201ENST00000437113 H0Y9P7 68 aa5.57□□□□□ -1.52
LINC01039-201ENST00000437113 MP68P56378 58 aa5.57□□□□□ -1.52
LINC01039-201ENST00000437113 MUC2Q02817 5179 aa5.56□□□□□ -1.52
LINC01039-201ENST00000437113 Q5W150 140 aa5.56□□□□□ -1.52
LINC01039-201ENST00000437113 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
LINC01039-201ENST00000437113 C5orf47Q569G3 176 aa5.55□□□□□ -1.52
LINC01039-201ENST00000437113 SERP2Q8N6R1 65 aa5.55□□□□□ -1.52
LINC01039-201ENST00000437113 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
LINC01039-201ENST00000437113 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
LINC01039-201ENST00000437113 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
LINC01039-201ENST00000437113 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
LINC01039-201ENST00000437113 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
LINC01039-201ENST00000437113 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
LINC01039-201ENST00000437113 H3BPC8 53 aa5.5□□□□□ -1.53
LINC01039-201ENST00000437113 C1orf64Q8NEQ6 169 aa5.5□□□□□ -1.53
LINC01039-201ENST00000437113 COX7CP15954 63 aa5.49□□□□□ -1.53
LINC01039-201ENST00000437113 SPINK7P58062 85 aa5.48□□□□□ -1.53
LINC01039-201ENST00000437113 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
LINC01039-201ENST00000437113 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
LINC01039-201ENST00000437113 SNURFQ9Y675 71 aa5.45□□□□□ -1.54
LINC01039-201ENST00000437113 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
LINC01039-201ENST00000437113 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
LINC01039-201ENST00000437113 KLKP1Q107X0 134 aa5.4□□□□□ -1.54
LINC01039-201ENST00000437113 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
LINC01039-201ENST00000437113 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
LINC01039-201ENST00000437113 HRES1P13985 223 aa5.38□□□□□ -1.55
LINC01039-201ENST00000437113 FAM236DA0A1B0GTK5 79 aa5.37□□□□□ -1.55
LINC01039-201ENST00000437113 FAM236CP0DP71 79 aa5.37□□□□□ -1.55
LINC01039-201ENST00000437113 NDUFC1O43677 76 aa5.36□□□□□ -1.55
LINC01039-201ENST00000437113 PCP4P48539 62 aa5.36□□□□□ -1.55
LINC01039-201ENST00000437113 C4orf26Q17RF5 130 aa5.36□□□□□ -1.55
LINC01039-201ENST00000437113 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
LINC01039-201ENST00000437113 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
LINC01039-201ENST00000437113 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
LINC01039-201ENST00000437113 CYSTM1Q9H1C7 97 aa5.31□□□□□ -1.56
LINC01039-201ENST00000437113 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
LINC01039-201ENST00000437113 H7BZZ5 65 aa5.29□□□□□ -1.56
LINC01039-201ENST00000437113 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
LINC01039-201ENST00000437113 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
LINC01039-201ENST00000437113 A8MUN3 132 aa5.27□□□□□ -1.57
LINC01039-201ENST00000437113 DMAC1Q96GE9 116 aa5.25□□□□□ -1.57
LINC01039-201ENST00000437113 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
LINC01039-201ENST00000437113 TMEM258P61165 79 aa5.24□□□□□ -1.57
LINC01039-201ENST00000437113 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
LINC01039-201ENST00000437113 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms