RNA–Protein interactions for RNA: ENST00000436636.6

TNIK-204, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIK, Length 6,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-204ENST00000436636 AKAP13Q12802 2813 aa7.41□□□□□ -1.22
TNIK-204ENST00000436636 DMXL1Q9Y485 3027 aa7.39□□□□□ -1.23
TNIK-204ENST00000436636 MAP1AP78559 2803 aaPredicted RBP7.38□□□□□ -1.23
TNIK-204ENST00000436636 ATMQ13315 3056 aa7.38□□□□□ -1.23
TNIK-204ENST00000436636 H0YAA0 97 aa7.34□□□□□ -1.23
TNIK-204ENST00000436636 CFAP46Q8IYW2 2715 aa7.32□□□□□ -1.24
TNIK-204ENST00000436636 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
TNIK-204ENST00000436636 MUC3AQ02505 3323 aa7.32□□□□□ -1.24
TNIK-204ENST00000436636 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
TNIK-204ENST00000436636 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
TNIK-204ENST00000436636 HECTD1Q9ULT8 2610 aa7.29□□□□□ -1.24
TNIK-204ENST00000436636 ZFHX3Q15911 3703 aa7.28□□□□□ -1.24
TNIK-204ENST00000436636 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
TNIK-204ENST00000436636 CUBNO60494 3623 aa7.25□□□□□ -1.25
TNIK-204ENST00000436636 ATRQ13535 2644 aa7.24□□□□□ -1.25
TNIK-204ENST00000436636 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
TNIK-204ENST00000436636 STAB1Q9NY15 2570 aa7.18□□□□□ -1.26
TNIK-204ENST00000436636 CHD6Q8TD26 2715 aa7.15□□□□□ -1.26
TNIK-204ENST00000436636 ITPR3Q14573 2671 aa7.15□□□□□ -1.27
TNIK-204ENST00000436636 MAST4O15021 2626 aa7.14□□□□□ -1.27
TNIK-204ENST00000436636 FLNAP21333 2647 aaKnown RBP7.13□□□□□ -1.27
TNIK-204ENST00000436636 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
TNIK-204ENST00000436636 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
TNIK-204ENST00000436636 FLNBO75369 2602 aaKnown RBP7.1□□□□□ -1.27
TNIK-204ENST00000436636 XP32Q5T750 250 aa7.1□□□□□ -1.27
TNIK-204ENST00000436636 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
TNIK-204ENST00000436636 CENPEQ02224 2701 aa7.09□□□□□ -1.27
TNIK-204ENST00000436636 NBEAL2Q6ZNJ1 2754 aa7.09□□□□□ -1.28
TNIK-204ENST00000436636 BSNQ9UPA5 3926 aa7.08□□□□□ -1.28
TNIK-204ENST00000436636 DCHS2Q6V1P9 2916 aa7.06□□□□□ -1.28
TNIK-204ENST00000436636 ZNF292O60281 2723 aa7.04□□□□□ -1.28
TNIK-204ENST00000436636 GCN1Q92616 2671 aaKnown RBP7.03□□□□□ -1.28
TNIK-204ENST00000436636 HRNRQ86YZ3 2850 aaPredicted RBP7.02□□□□□ -1.29
TNIK-204ENST00000436636 CSMD2Q7Z408 3487 aa7.01□□□□□ -1.29
TNIK-204ENST00000436636 VPS13CQ709C8 3753 aa7.01□□□□□ -1.29
TNIK-204ENST00000436636 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
TNIK-204ENST00000436636 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
TNIK-204ENST00000436636 HELZ2Q9BYK8 2649 aaKnown RBP7□□□□□ -1.29
TNIK-204ENST00000436636 TEX15Q9BXT5 2789 aa7□□□□□ -1.29
TNIK-204ENST00000436636 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
TNIK-204ENST00000436636 CRYBG3Q68DQ2 2970 aa6.99□□□□□ -1.29
TNIK-204ENST00000436636 INE1O15225 51 aa6.98□□□□□ -1.29
TNIK-204ENST00000436636 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
TNIK-204ENST00000436636 ITPR1Q14643 2758 aa6.93□□□□□ -1.3
TNIK-204ENST00000436636 NOTCH1P46531 2555 aa6.88□□□□□ -1.31
TNIK-204ENST00000436636 IGSF10Q6WRI0 2623 aa6.86□□□□□ -1.31
TNIK-204ENST00000436636 COL6A5A8TX70 2615 aa6.86□□□□□ -1.31
TNIK-204ENST00000436636 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
TNIK-204ENST00000436636 FBN2P35556 2912 aa6.84□□□□□ -1.31
TNIK-204ENST00000436636 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
TNIK-204ENST00000436636 UNC79Q9P2D8 2635 aa6.81□□□□□ -1.32
TNIK-204ENST00000436636 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
TNIK-204ENST00000436636 APCP25054 2843 aa6.79□□□□□ -1.32
TNIK-204ENST00000436636 ZANQ9Y493 2812 aa6.78□□□□□ -1.32
TNIK-204ENST00000436636 TEP1Q99973 2627 aaKnown RBP6.73□□□□□ -1.33
TNIK-204ENST00000436636 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
TNIK-204ENST00000436636 CELSR2Q9HCU4 2923 aa6.68□□□□□ -1.34
TNIK-204ENST00000436636 NSD1Q96L73 2696 aaPredicted RBP6.67□□□□□ -1.34
TNIK-204ENST00000436636 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
TNIK-204ENST00000436636 HIVEP1P15822 2718 aa6.66□□□□□ -1.34
TNIK-204ENST00000436636 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
TNIK-204ENST00000436636 KMT2BQ9UMN6 2715 aaPredicted RBP6.64□□□□□ -1.35
TNIK-204ENST00000436636 BAHCC1Q9P281 2608 aa6.64□□□□□ -1.35
TNIK-204ENST00000436636 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
TNIK-204ENST00000436636 FLNCQ14315 2725 aa6.63□□□□□ -1.35
TNIK-204ENST00000436636 NF1P21359 2839 aa6.6□□□□□ -1.35
TNIK-204ENST00000436636 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
TNIK-204ENST00000436636 AKAP9Q99996 3911 aa6.55□□□□□ -1.36
TNIK-204ENST00000436636 MXRA5Q9NR99 2828 aa6.55□□□□□ -1.36
TNIK-204ENST00000436636 UBR5O95071 2799 aaPredicted RBP6.52□□□□□ -1.37
TNIK-204ENST00000436636 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
TNIK-204ENST00000436636 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
TNIK-204ENST00000436636 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
TNIK-204ENST00000436636 KRTAP21-3Q3LHN1 58 aa6.41□□□□□ -1.38
TNIK-204ENST00000436636 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
TNIK-204ENST00000436636 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
TNIK-204ENST00000436636 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
TNIK-204ENST00000436636 ANK3Q12955 4377 aaKnown RBP6.34□□□□□ -1.39
TNIK-204ENST00000436636 NIPBLQ6KC79 2804 aaeCLIP6.32□□□□□ -1.4
TNIK-204ENST00000436636 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
TNIK-204ENST00000436636 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
TNIK-204ENST00000436636 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
TNIK-204ENST00000436636 PKD1L1Q8TDX9 2849 aa6.18□□□□□ -1.42
TNIK-204ENST00000436636 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
TNIK-204ENST00000436636 PDZD2O15018 2839 aa6.13□□□□□ -1.43
TNIK-204ENST00000436636 VWFP04275 2813 aa6.13□□□□□ -1.43
TNIK-204ENST00000436636 FBN1P35555 2871 aaKnown RBP6.11□□□□□ -1.43
TNIK-204ENST00000436636 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
TNIK-204ENST00000436636 TENM1Q9UKZ4 2725 aa6.06□□□□□ -1.44
TNIK-204ENST00000436636 TGP01266 2768 aa6.05□□□□□ -1.44
TNIK-204ENST00000436636 TENM4Q6N022 2769 aa6.04□□□□□ -1.44
TNIK-204ENST00000436636 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
TNIK-204ENST00000436636 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
TNIK-204ENST00000436636 OTOGQ6ZRI0 2925 aa6□□□□□ -1.45
TNIK-204ENST00000436636 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
TNIK-204ENST00000436636 HUWE1Q7Z6Z7 4374 aaKnown RBP5.94□□□□□ -1.46
TNIK-204ENST00000436636 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
TNIK-204ENST00000436636 DNAH10Q8IVF4 4471 aa5.92□□□□□ -1.46
TNIK-204ENST00000436636 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.47
TNIK-204ENST00000436636 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms