RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CD164Q04900 197 aa10.96□□□□□ -0.66
CLK1-205ENST00000434813 Q6ZSA8 131 aa10.93□□□□□ -0.66
CLK1-205ENST00000434813 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
CLK1-205ENST00000434813 LINC00336Q6ZUF6 198 aa10.92□□□□□ -0.66
CLK1-205ENST00000434813 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
CLK1-205ENST00000434813 FAT2Q9NYQ8 4349 aa10.91□□□□□ -0.66
CLK1-205ENST00000434813 RYR2Q92736 4967 aa10.9□□□□□ -0.66
CLK1-205ENST00000434813 Q1T7F1 81 aa10.9□□□□□ -0.66
CLK1-205ENST00000434813 A0A087X002 238 aa10.89□□□□□ -0.67
CLK1-205ENST00000434813 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
CLK1-205ENST00000434813 NOTCH2NLQ7Z3S9 236 aa10.89□□□□□ -0.67
CLK1-205ENST00000434813 NDUFS5O43920 106 aa10.89□□□□□ -0.67
CLK1-205ENST00000434813 PKD1P98161 4303 aa10.88□□□□□ -0.67
CLK1-205ENST00000434813 RYR3Q15413 4870 aa10.87□□□□□ -0.67
CLK1-205ENST00000434813 SPINK6Q6UWN8 80 aa10.87□□□□□ -0.67
CLK1-205ENST00000434813 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
CLK1-205ENST00000434813 PRO0628Q9UI54 55 aa10.83□□□□□ -0.68
CLK1-205ENST00000434813 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
CLK1-205ENST00000434813 KRTAP13-2Q52LG2 175 aa10.8□□□□□ -0.68
CLK1-205ENST00000434813 C8orf87E5RJ46 101 aa10.79□□□□□ -0.68
CLK1-205ENST00000434813 LRP1BQ9NZR2 4599 aa10.79□□□□□ -0.68
CLK1-205ENST00000434813 V9GYY9 64 aa10.76□□□□□ -0.69
CLK1-205ENST00000434813 KRTAP13-3Q3SY46 172 aa10.75□□□□□ -0.69
CLK1-205ENST00000434813 BRK1Q8WUW1 75 aa10.74□□□□□ -0.69
CLK1-205ENST00000434813 COA5Q86WW8 74 aa10.74□□□□□ -0.69
CLK1-205ENST00000434813 LOC101927531A0A1B0GV80 90 aa10.73□□□□□ -0.69
CLK1-205ENST00000434813 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
CLK1-205ENST00000434813 C1orf195Q5TG92 126 aa10.72□□□□□ -0.69
CLK1-205ENST00000434813 Q5W150 140 aa10.71□□□□□ -0.69
CLK1-205ENST00000434813 PKHD1P08F94 4074 aa10.7□□□□□ -0.7
CLK1-205ENST00000434813 PSPHP1O15172 72 aa10.69□□□□□ -0.7
CLK1-205ENST00000434813 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
CLK1-205ENST00000434813 A0A1B0GVY2 172 aa10.67□□□□□ -0.7
CLK1-205ENST00000434813 LINC00313P59037 77 aa10.67□□□□□ -0.7
CLK1-205ENST00000434813 LIMD2Q9BT23 127 aa10.66□□□□□ -0.7
CLK1-205ENST00000434813 A8MUN3 132 aa10.63□□□□□ -0.71
CLK1-205ENST00000434813 VPS13BQ7Z7G8 4022 aa10.61□□□□□ -0.71
CLK1-205ENST00000434813 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
CLK1-205ENST00000434813 Q5VV11 94 aa10.6□□□□□ -0.71
CLK1-205ENST00000434813 KRTAP16-1A8MUX0 517 aa10.58□□□□□ -0.72
CLK1-205ENST00000434813 HRES1P13985 223 aa10.58□□□□□ -0.72
CLK1-205ENST00000434813 PLA2G1BP04054 148 aaKnown RBP10.58□□□□□ -0.72
CLK1-205ENST00000434813 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
CLK1-205ENST00000434813 PRR15LQ9BU68 103 aa10.55□□□□□ -0.72
CLK1-205ENST00000434813 C4orf48Q5BLP8 95 aa10.54□□□□□ -0.72
CLK1-205ENST00000434813 SPINK1P00995 79 aa10.53□□□□□ -0.72
CLK1-205ENST00000434813 SMR3BP02814 79 aaPredicted RBP10.52□□□□□ -0.73
CLK1-205ENST00000434813 IGKV2-30P06310 120 aa10.5□□□□□ -0.73
CLK1-205ENST00000434813 DYNC1H1Q14204 4646 aaKnown RBP10.5□□□□□ -0.73
CLK1-205ENST00000434813 Q75L30 129 aa10.48□□□□□ -0.73
CLK1-205ENST00000434813 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
CLK1-205ENST00000434813 EPPK1P58107 5090 aaKnown RBP10.48□□□□□ -0.73
CLK1-205ENST00000434813 CHKB-CPT1BH3BT56 60 aa10.46□□□□□ -0.73
CLK1-205ENST00000434813 SPAG11AQ6PDA7 123 aa10.46□□□□□ -0.73
CLK1-205ENST00000434813 RETNLBQ9BQ08 111 aa10.46□□□□□ -0.73
CLK1-205ENST00000434813 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.74
CLK1-205ENST00000434813 DMAC1Q96GE9 116 aa10.46□□□□□ -0.74
CLK1-205ENST00000434813 ACYP2P14621 99 aa10.45□□□□□ -0.74
CLK1-205ENST00000434813 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
CLK1-205ENST00000434813 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
CLK1-205ENST00000434813 APOBP04114 4563 aaKnown RBP10.4□□□□□ -0.74
CLK1-205ENST00000434813 A6NED7 52 aa10.34□□□□□ -0.75
CLK1-205ENST00000434813 A8MU10 97 aa10.34□□□□□ -0.75
CLK1-205ENST00000434813 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
CLK1-205ENST00000434813 IGKV2D-30A0A075B6S6 120 aa10.33□□□□□ -0.76
CLK1-205ENST00000434813 FAT1Q14517 4588 aa10.3□□□□□ -0.76
CLK1-205ENST00000434813 LCA10Q71F78 164 aa10.28□□□□□ -0.76
CLK1-205ENST00000434813 BIRC6Q9NR09 4857 aa10.27□□□□□ -0.77
CLK1-205ENST00000434813 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
CLK1-205ENST00000434813 CDC42SE1Q9NRR8 79 aa10.26□□□□□ -0.77
CLK1-205ENST00000434813 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
CLK1-205ENST00000434813 SPINK7P58062 85 aa10.21□□□□□ -0.77
CLK1-205ENST00000434813 KIAA1109Q2LD37 5005 aa10.2□□□□□ -0.78
CLK1-205ENST00000434813 Q5VSD8 79 aa10.19□□□□□ -0.78
CLK1-205ENST00000434813 ATP11AUNQ6ZP68 121 aa10.19□□□□□ -0.78
CLK1-205ENST00000434813 C20orf166-AS1Q96NR2 134 aa10.16□□□□□ -0.78
CLK1-205ENST00000434813 RYR1P21817 5038 aa10.16□□□□□ -0.78
CLK1-205ENST00000434813 A8MUU9 505 aa10.16□□□□□ -0.78
CLK1-205ENST00000434813 HSPG2P98160 4391 aa10.15□□□□□ -0.79
CLK1-205ENST00000434813 PMAIP1Q13794 54 aa10.14□□□□□ -0.79
CLK1-205ENST00000434813 SPTSSBQ8NFR3 76 aa10.14□□□□□ -0.79
CLK1-205ENST00000434813 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
CLK1-205ENST00000434813 A0A1B0GU69 56 aa10.11□□□□□ -0.79
CLK1-205ENST00000434813 Q8N1X5 172 aa10.1□□□□□ -0.79
CLK1-205ENST00000434813 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
CLK1-205ENST00000434813 A6NN06 94 aa10.03□□□□□ -0.8
CLK1-205ENST00000434813 HERC2O95714 4834 aa10.02□□□□□ -0.81
CLK1-205ENST00000434813 FLG2Q5D862 2391 aaPredicted RBP9.96□□□□□ -0.81
CLK1-205ENST00000434813 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
CLK1-205ENST00000434813 KRTAP4-5Q9BYR2 181 aa9.95□□□□□ -0.82
CLK1-205ENST00000434813 KTN1-AS1Q86SY8 53 aa9.94□□□□□ -0.82
CLK1-205ENST00000434813 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
CLK1-205ENST00000434813 UQCR11O14957 56 aa9.92□□□□□ -0.82
CLK1-205ENST00000434813 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
CLK1-205ENST00000434813 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.82
CLK1-205ENST00000434813 KRTAP3-1Q9BYR8 98 aa9.9□□□□□ -0.82
CLK1-205ENST00000434813 TNXBP22105 4242 aa9.9□□□□□ -0.83
CLK1-205ENST00000434813 MIR22HGQ0VDD5 57 aa9.87□□□□□ -0.83
CLK1-205ENST00000434813 SEC61GP60059 68 aa9.83□□□□□ -0.84
CLK1-205ENST00000434813 ABCA13Q86UQ4 5058 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 808.3 ms