RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 LY6G6CO95867 125 aa14.65□□□□□ -0.06
LMBR1-209ENST00000434453 CDK2AP2O75956 126 aa14.65□□□□□ -0.06
LMBR1-209ENST00000434453 MRPL34Q9BQ48 92 aaKnown RBP14.64□□□□□ -0.07
LMBR1-209ENST00000434453 IGLV7-46A0A075B6I9 117 aa14.63□□□□□ -0.07
LMBR1-209ENST00000434453 NDUFS5O43920 106 aa14.62□□□□□ -0.07
LMBR1-209ENST00000434453 CD164Q04900 197 aa14.62□□□□□ -0.07
LMBR1-209ENST00000434453 KRTAP10-2P60368 255 aa14.61□□□□□ -0.07
LMBR1-209ENST00000434453 PCOTHQ58A44 107 aa14.61□□□□□ -0.07
LMBR1-209ENST00000434453 PSPHP1O15172 72 aa14.61□□□□□ -0.07
LMBR1-209ENST00000434453 CIRBP-AS1Q8TBR5 109 aa14.6□□□□□ -0.07
LMBR1-209ENST00000434453 SPINK6Q6UWN8 80 aa14.57□□□□□ -0.08
LMBR1-209ENST00000434453 A8MUN3 132 aa14.51□□□□□ -0.09
LMBR1-209ENST00000434453 COA5Q86WW8 74 aa14.51□□□□□ -0.09
LMBR1-209ENST00000434453 PKD1P98161 4303 aa14.51□□□□□ -0.09
LMBR1-209ENST00000434453 Q8N9P0 234 aaPredicted RBP14.51□□□□□ -0.09
LMBR1-209ENST00000434453 V9GYY9 64 aa14.5□□□□□ -0.09
LMBR1-209ENST00000434453 SSBP3-AS1Q7Z2R9 100 aa14.49□□□□□ -0.09
LMBR1-209ENST00000434453 LRP1BQ9NZR2 4599 aa14.49□□□□□ -0.09
LMBR1-209ENST00000434453 Q5W150 140 aa14.47□□□□□ -0.09
LMBR1-209ENST00000434453 KRTAP13-3Q3SY46 172 aa14.46□□□□□ -0.1
LMBR1-209ENST00000434453 HYDINQ4G0P3 5121 aa14.46□□□□□ -0.1
LMBR1-209ENST00000434453 FAT2Q9NYQ8 4349 aa14.45□□□□□ -0.1
LMBR1-209ENST00000434453 Q5VV11 94 aa14.44□□□□□ -0.1
LMBR1-209ENST00000434453 Q6ZSA8 131 aa14.43□□□□□ -0.1
LMBR1-209ENST00000434453 KRTAP13-2Q52LG2 175 aa14.42□□□□□ -0.1
LMBR1-209ENST00000434453 KRTAP10-1P60331 282 aa14.42□□□□□ -0.1
LMBR1-209ENST00000434453 C1orf195Q5TG92 126 aa14.41□□□□□ -0.1
LMBR1-209ENST00000434453 LIMD2Q9BT23 127 aa14.38□□□□□ -0.11
LMBR1-209ENST00000434453 LOC101927531A0A1B0GV80 90 aa14.35□□□□□ -0.11
LMBR1-209ENST00000434453 C8orf87E5RJ46 101 aa14.34□□□□□ -0.11
LMBR1-209ENST00000434453 HRES1P13985 223 aa14.33□□□□□ -0.12
LMBR1-209ENST00000434453 VPS13BQ7Z7G8 4022 aa14.32□□□□□ -0.12
LMBR1-209ENST00000434453 PRR15LQ9BU68 103 aa14.31□□□□□ -0.12
LMBR1-209ENST00000434453 KRTAP1-4P0C5Y4 121 aa14.28□□□□□ -0.12
LMBR1-209ENST00000434453 A8MU10 97 aa14.27□□□□□ -0.12
LMBR1-209ENST00000434453 LINC00313P59037 77 aa14.26□□□□□ -0.13
LMBR1-209ENST00000434453 CHKB-CPT1BH3BT56 60 aa14.23□□□□□ -0.13
LMBR1-209ENST00000434453 SPAG11AQ6PDA7 123 aa14.21□□□□□ -0.13
LMBR1-209ENST00000434453 Q75L30 129 aa14.2□□□□□ -0.14
LMBR1-209ENST00000434453 LINC01558Q9Y6Z2 57 aa14.18□□□□□ -0.14
LMBR1-209ENST00000434453 KRTAP16-1A8MUX0 517 aa14.18□□□□□ -0.14
LMBR1-209ENST00000434453 FAM229AH3BQW9 127 aa14.14□□□□□ -0.15
LMBR1-209ENST00000434453 RETNLBQ9BQ08 111 aa14.14□□□□□ -0.15
LMBR1-209ENST00000434453 PKHD1P08F94 4074 aa14.11□□□□□ -0.15
LMBR1-209ENST00000434453 PRR26Q8N8Z3 221 aa14.09□□□□□ -0.15
LMBR1-209ENST00000434453 LCA10Q71F78 164 aa14.07□□□□□ -0.16
LMBR1-209ENST00000434453 IGKV2-30P06310 120 aa14.07□□□□□ -0.16
LMBR1-209ENST00000434453 PLA2G1BP04054 148 aaKnown RBP14.06□□□□□ -0.16
LMBR1-209ENST00000434453 DMAC1Q96GE9 116 aa14.05□□□□□ -0.16
LMBR1-209ENST00000434453 A6NED7 52 aa14.03□□□□□ -0.16
LMBR1-209ENST00000434453 ACYP2P14621 99 aa14.03□□□□□ -0.16
LMBR1-209ENST00000434453 TYMSOSQ8TAI1 123 aa14□□□□□ -0.17
LMBR1-209ENST00000434453 SACSQ9NZJ4 4579 aa13.99□□□□□ -0.17
LMBR1-209ENST00000434453 C4orf48Q5BLP8 95 aa13.95□□□□□ -0.18
LMBR1-209ENST00000434453 SPINK1P00995 79 aa13.94□□□□□ -0.18
LMBR1-209ENST00000434453 SPINK7P58062 85 aa13.92□□□□□ -0.18
LMBR1-209ENST00000434453 CDC42SE1Q9NRR8 79 aa13.91□□□□□ -0.18
LMBR1-209ENST00000434453 PMAIP1Q13794 54 aa13.88□□□□□ -0.19
LMBR1-209ENST00000434453 DYNC1H1Q14204 4646 aaKnown RBP13.86□□□□□ -0.19
LMBR1-209ENST00000434453 IGKV2D-30A0A075B6S6 120 aa13.86□□□□□ -0.19
LMBR1-209ENST00000434453 ATP11AUNQ6ZP68 121 aa13.86□□□□□ -0.19
LMBR1-209ENST00000434453 SPTSSBQ8NFR3 76 aa13.85□□□□□ -0.19
LMBR1-209ENST00000434453 LINC00304Q8N9R0 145 aa13.81□□□□□ -0.2
LMBR1-209ENST00000434453 RPS29P62273 56 aaKnown RBP13.77□□□□□ -0.21
LMBR1-209ENST00000434453 SMR3BP02814 79 aaPredicted RBP13.76□□□□□ -0.21
LMBR1-209ENST00000434453 FAT1Q14517 4588 aa13.75□□□□□ -0.21
LMBR1-209ENST00000434453 PKHD1L1Q86WI1 4243 aa13.72□□□□□ -0.21
LMBR1-209ENST00000434453 APOBP04114 4563 aaKnown RBP13.71□□□□□ -0.21
LMBR1-209ENST00000434453 A6NN06 94 aa13.71□□□□□ -0.22
LMBR1-209ENST00000434453 KRTAP10-4P60372 401 aaPredicted RBP13.68□□□□□ -0.22
LMBR1-209ENST00000434453 C7orf65Q6ZTY9 151 aa13.68□□□□□ -0.22
LMBR1-209ENST00000434453 A0A1B0GVY2 172 aa13.67□□□□□ -0.22
LMBR1-209ENST00000434453 A0A1B0GU69 56 aa13.64□□□□□ -0.23
LMBR1-209ENST00000434453 KTN1-AS1Q86SY8 53 aa13.58□□□□□ -0.24
LMBR1-209ENST00000434453 Q8N1X5 172 aa13.56□□□□□ -0.24
LMBR1-209ENST00000434453 C9orf92A6NGG3 77 aa13.55□□□□□ -0.24
LMBR1-209ENST00000434453 C20orf166-AS1Q96NR2 134 aa13.52□□□□□ -0.25
LMBR1-209ENST00000434453 A8MUU9 505 aa13.51□□□□□ -0.25
LMBR1-209ENST00000434453 RYR2Q92736 4967 aa13.48□□□□□ -0.25
LMBR1-209ENST00000434453 SPATA8Q6RVD6 105 aa13.45□□□□□ -0.26
LMBR1-209ENST00000434453 KMT2CQ8NEZ4 4911 aaKnown RBP13.45□□□□□ -0.26
LMBR1-209ENST00000434453 SEC61GP60059 68 aa13.41□□□□□ -0.26
LMBR1-209ENST00000434453 FLG2Q5D862 2391 aaPredicted RBP13.39□□□□□ -0.27
LMBR1-209ENST00000434453 UQCR11O14957 56 aa13.38□□□□□ -0.27
LMBR1-209ENST00000434453 MIR22HGQ0VDD5 57 aa13.35□□□□□ -0.27
LMBR1-209ENST00000434453 KRTAP3-1Q9BYR8 98 aa13.35□□□□□ -0.27
LMBR1-209ENST00000434453 LRP1Q07954 4544 aaKnown RBP13.26□□□□□ -0.29
LMBR1-209ENST00000434453 TNXBP22105 4242 aa13.24□□□□□ -0.29
LMBR1-209ENST00000434453 FAT3Q8TDW7 4589 aa13.23□□□□□ -0.29
LMBR1-209ENST00000434453 RBM12B-AS1Q9P1G2 102 aa13.23□□□□□ -0.29
LMBR1-209ENST00000434453 RYR3Q15413 4870 aa13.19□□□□□ -0.3
LMBR1-209ENST00000434453 HSPG2P98160 4391 aa13.13□□□□□ -0.31
LMBR1-209ENST00000434453 KRTAP10-8P60410 259 aa13.1□□□□□ -0.31
LMBR1-209ENST00000434453 ADM2Q7Z4H4 148 aa13.08□□□□□ -0.32
LMBR1-209ENST00000434453 PRAC1Q96KF2 57 aa13.07□□□□□ -0.32
LMBR1-209ENST00000434453 COX6B2Q6YFQ2 88 aa13.05□□□□□ -0.32
LMBR1-209ENST00000434453 H0YAA0 97 aa13.04□□□□□ -0.32
LMBR1-209ENST00000434453 Q5VSD8 79 aa13□□□□□ -0.33
LMBR1-209ENST00000434453 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
LMBR1-209ENST00000434453 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms