RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 IGHV6-1A0A0B4J1U7 121 aa12.81□□□□□ -0.36
SMARCAL1-208ENST00000434435 IGKV3D-7A0A0C4DH55 119 aa12.81□□□□□ -0.36
SMARCAL1-208ENST00000434435 C9orf92A6NGG3 77 aa12.8□□□□□ -0.36
SMARCAL1-208ENST00000434435 CXCL6P80162 114 aa12.8□□□□□ -0.36
SMARCAL1-208ENST00000434435 ATP5EP2Q5VTU8 51 aa12.79□□□□□ -0.36
SMARCAL1-208ENST00000434435 LINC00643Q86TS7 51 aa12.79□□□□□ -0.36
SMARCAL1-208ENST00000434435 K7EQZ3 153 aa12.78□□□□□ -0.36
SMARCAL1-208ENST00000434435 PRR15Q8IV56 129 aa12.78□□□□□ -0.36
SMARCAL1-208ENST00000434435 C8orf87E5RJ46 101 aa12.77□□□□□ -0.37
SMARCAL1-208ENST00000434435 CDIP1Q9H305 208 aa12.75□□□□□ -0.37
SMARCAL1-208ENST00000434435 LINC00313P59037 77 aa12.74□□□□□ -0.37
SMARCAL1-208ENST00000434435 Q8N9L7 120 aa12.74□□□□□ -0.37
SMARCAL1-208ENST00000434435 HMCN2Q8NDA2 5059 aa12.7□□□□□ -0.38
SMARCAL1-208ENST00000434435 NOTCH2NLQ7Z3S9 236 aa12.7□□□□□ -0.38
SMARCAL1-208ENST00000434435 C8orf17Q9NRJ1 99 aa12.7□□□□□ -0.38
SMARCAL1-208ENST00000434435 LPAP08519 4548 aa12.67□□□□□ -0.38
SMARCAL1-208ENST00000434435 XP32Q5T750 250 aa12.66□□□□□ -0.38
SMARCAL1-208ENST00000434435 MMP24-AS1A0A0U1RRL7 71 aa12.65□□□□□ -0.38
SMARCAL1-208ENST00000434435 KRTAP16-1A8MUX0 517 aa12.62□□□□□ -0.39
SMARCAL1-208ENST00000434435 HIST1H4AP62805 103 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-208ENST00000434435 hDV103S1A0JD37 113 aa12.58□□□□□ -0.4
SMARCAL1-208ENST00000434435 HCG22E2RYF7 251 aa12.57□□□□□ -0.4
SMARCAL1-208ENST00000434435 WFDC13Q8IUB5 93 aa12.57□□□□□ -0.4
SMARCAL1-208ENST00000434435 TMEM254Q8TBM7 123 aa12.57□□□□□ -0.4
SMARCAL1-208ENST00000434435 CASC2Q6XLA1 102 aa12.56□□□□□ -0.4
SMARCAL1-208ENST00000434435 C20orf166-AS1Q96NR2 134 aa12.55□□□□□ -0.4
SMARCAL1-208ENST00000434435 Q75L30 129 aa12.54□□□□□ -0.4
SMARCAL1-208ENST00000434435 MRPL34Q9BQ48 92 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-208ENST00000434435 LRP2P98164 4655 aa12.53□□□□□ -0.4
SMARCAL1-208ENST00000434435 A8MUU9 505 aa12.53□□□□□ -0.4
SMARCAL1-208ENST00000434435 RPL37P61927 97 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-208ENST00000434435 MT-ATP8P03928 68 aa12.51□□□□□ -0.41
SMARCAL1-208ENST00000434435 Q8N9P0 234 aaPredicted RBP12.49□□□□□ -0.41
SMARCAL1-208ENST00000434435 A0A087WVE0 104 aa12.48□□□□□ -0.41
SMARCAL1-208ENST00000434435 IMUPQ9GZP8 106 aa12.46□□□□□ -0.41
SMARCAL1-208ENST00000434435 SEC61BP60468 96 aaKnown RBP12.44□□□□□ -0.42
SMARCAL1-208ENST00000434435 NDUFS5O43920 106 aa12.43□□□□□ -0.42
SMARCAL1-208ENST00000434435 ATP11AUNQ6ZP68 121 aa12.4□□□□□ -0.42
SMARCAL1-208ENST00000434435 PCOTHQ58A44 107 aa12.37□□□□□ -0.43
SMARCAL1-208ENST00000434435 MUC17Q685J3 4493 aa12.35□□□□□ -0.43
SMARCAL1-208ENST00000434435 ZCCHC13Q8WW36 166 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-208ENST00000434435 TP53AIP1Q9HCN2 124 aa12.29□□□□□ -0.44
SMARCAL1-208ENST00000434435 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
SMARCAL1-208ENST00000434435 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
SMARCAL1-208ENST00000434435 SCGB1A1P11684 91 aa12.22□□□□□ -0.45
SMARCAL1-208ENST00000434435 Q5W150 140 aa12.18□□□□□ -0.46
SMARCAL1-208ENST00000434435 UQCRQO14949 82 aa12.17□□□□□ -0.46
SMARCAL1-208ENST00000434435 OCR1Q9BZK8 76 aa12.15□□□□□ -0.46
SMARCAL1-208ENST00000434435 KRTAP4-1Q9BYQ7 146 aa12.13□□□□□ -0.47
SMARCAL1-208ENST00000434435 TRAV22A0A0B4J277 110 aa12.12□□□□□ -0.47
SMARCAL1-208ENST00000434435 UBR4Q5T4S7 5183 aa12.11□□□□□ -0.47
SMARCAL1-208ENST00000434435 ATOX1O00244 68 aa12.09□□□□□ -0.47
SMARCAL1-208ENST00000434435 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
SMARCAL1-208ENST00000434435 H0Y9P7 68 aa12.06□□□□□ -0.48
SMARCAL1-208ENST00000434435 SPINK7P58062 85 aa12.04□□□□□ -0.48
SMARCAL1-208ENST00000434435 IGKV2D-30A0A075B6S6 120 aa12.03□□□□□ -0.48
SMARCAL1-208ENST00000434435 IGKV2-30P06310 120 aa12.03□□□□□ -0.48
SMARCAL1-208ENST00000434435 C7orf65Q6ZTY9 151 aa12.03□□□□□ -0.48
SMARCAL1-208ENST00000434435 TRAV7A0A075B6U4 112 aa12.02□□□□□ -0.49
SMARCAL1-208ENST00000434435 RNF213Q63HN8 5207 aa12□□□□□ -0.49
SMARCAL1-208ENST00000434435 C5orf47Q569G3 176 aa12□□□□□ -0.49
SMARCAL1-208ENST00000434435 MP68P56378 58 aa11.99□□□□□ -0.49
SMARCAL1-208ENST00000434435 LOC101927531A0A1B0GV80 90 aa11.96□□□□□ -0.49
SMARCAL1-208ENST00000434435 HRES1P13985 223 aa11.92□□□□□ -0.5
SMARCAL1-208ENST00000434435 LINC00208Q96KT6 92 aa11.92□□□□□ -0.5
SMARCAL1-208ENST00000434435 H3BPC8 53 aa11.91□□□□□ -0.5
SMARCAL1-208ENST00000434435 SERP2Q8N6R1 65 aa11.91□□□□□ -0.5
SMARCAL1-208ENST00000434435 C1orf64Q8NEQ6 169 aa11.91□□□□□ -0.5
SMARCAL1-208ENST00000434435 CYP4F30PQ9H0H9 118 aa11.88□□□□□ -0.51
SMARCAL1-208ENST00000434435 MUC2Q02817 5179 aa11.85□□□□□ -0.51
SMARCAL1-208ENST00000434435 RBM12B-AS1Q9P1G2 102 aa11.84□□□□□ -0.51
SMARCAL1-208ENST00000434435 MPLKIPQ8TAP9 179 aa11.82□□□□□ -0.52
SMARCAL1-208ENST00000434435 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
SMARCAL1-208ENST00000434435 ANAPC13Q9BS18 74 aa11.79□□□□□ -0.52
SMARCAL1-208ENST00000434435 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
SMARCAL1-208ENST00000434435 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
SMARCAL1-208ENST00000434435 COX7CP15954 63 aa11.76□□□□□ -0.53
SMARCAL1-208ENST00000434435 COX6B2Q6YFQ2 88 aa11.76□□□□□ -0.53
SMARCAL1-208ENST00000434435 KRTAP19-2Q3LHN2 52 aa11.74□□□□□ -0.53
SMARCAL1-208ENST00000434435 C20orf197Q8N268 126 aa11.73□□□□□ -0.53
SMARCAL1-208ENST00000434435 KLKP1Q107X0 134 aa11.72□□□□□ -0.53
SMARCAL1-208ENST00000434435 C4orf26Q17RF5 130 aa11.72□□□□□ -0.53
SMARCAL1-208ENST00000434435 SNURFQ9Y675 71 aa11.69□□□□□ -0.54
SMARCAL1-208ENST00000434435 LCE2CQ5TA81 110 aa11.64□□□□□ -0.55
SMARCAL1-208ENST00000434435 FAT4Q6V0I7 4981 aa11.55□□□□□ -0.56
SMARCAL1-208ENST00000434435 H1FX-AS1Q4G0G2 97 aa11.54□□□□□ -0.56
SMARCAL1-208ENST00000434435 KRTAP3-1Q9BYR8 98 aa11.53□□□□□ -0.56
SMARCAL1-208ENST00000434435 FLGP20930 4061 aaPredicted RBP11.51□□□□□ -0.57
SMARCAL1-208ENST00000434435 CCDC179H3BU77 68 aa11.5□□□□□ -0.57
SMARCAL1-208ENST00000434435 A8MUN3 132 aa11.48□□□□□ -0.57
SMARCAL1-208ENST00000434435 NDUFC1O43677 76 aa11.48□□□□□ -0.57
SMARCAL1-208ENST00000434435 MT1HP80294 61 aa11.47□□□□□ -0.57
SMARCAL1-208ENST00000434435 CYSTM1Q9H1C7 97 aa11.44□□□□□ -0.58
SMARCAL1-208ENST00000434435 SPANXA2-OT1Q8N9U9 137 aa11.43□□□□□ -0.58
SMARCAL1-208ENST00000434435 DMAC1Q96GE9 116 aa11.41□□□□□ -0.58
SMARCAL1-208ENST00000434435 H7BZZ5 65 aa11.4□□□□□ -0.58
SMARCAL1-208ENST00000434435 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
SMARCAL1-208ENST00000434435 M0R2T5 61 aa11.37□□□□□ -0.59
SMARCAL1-208ENST00000434435 S4R3F8 94 aa11.36□□□□□ -0.59
SMARCAL1-208ENST00000434435 ACYP2P14621 99 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms