RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 C21orf62-AS1Q17RA5 79 aa11.23□□□□□ -0.61
SEMA3B-205ENST00000434030 Q6ZQT0 140 aa11.23□□□□□ -0.61
SEMA3B-205ENST00000434030 SMIM6P0DI80 62 aa11.22□□□□□ -0.61
SEMA3B-205ENST00000434030 J3KT08 172 aa11.2□□□□□ -0.62
SEMA3B-205ENST00000434030 JMJD7-PLA2G4BH0Y9G9 81 aa11.19□□□□□ -0.62
SEMA3B-205ENST00000434030 LOC110117498A0A087WWA1 95 aa11.16□□□□□ -0.62
SEMA3B-205ENST00000434030 HRES1P13985 223 aa11.14□□□□□ -0.63
SEMA3B-205ENST00000434030 A0A1B0GW54 56 aa11.13□□□□□ -0.63
SEMA3B-205ENST00000434030 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
SEMA3B-205ENST00000434030 FAM236DA0A1B0GTK5 79 aa11.12□□□□□ -0.63
SEMA3B-205ENST00000434030 FAM236CP0DP71 79 aa11.12□□□□□ -0.63
SEMA3B-205ENST00000434030 PDE6GP18545 87 aa11.12□□□□□ -0.63
SEMA3B-205ENST00000434030 NDUFB1O75438 58 aa11.11□□□□□ -0.63
SEMA3B-205ENST00000434030 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
SEMA3B-205ENST00000434030 LYRM7Q5U5X0 104 aa11.1□□□□□ -0.63
SEMA3B-205ENST00000434030 C14orf132Q9NPU4 83 aa11.1□□□□□ -0.63
SEMA3B-205ENST00000434030 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
SEMA3B-205ENST00000434030 KRTAP9-8Q9BYQ0 159 aa11.09□□□□□ -0.63
SEMA3B-205ENST00000434030 LOC105371267A0A1B0GV96 52 aa11.08□□□□□ -0.64
SEMA3B-205ENST00000434030 BATFQ16520 125 aa11.08□□□□□ -0.64
SEMA3B-205ENST00000434030 ZCCHC13Q8WW36 166 aaKnown RBP11.08□□□□□ -0.64
SEMA3B-205ENST00000434030 A8MWP4 228 aa11.06□□□□□ -0.64
SEMA3B-205ENST00000434030 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
SEMA3B-205ENST00000434030 C8orf17Q9NRJ1 99 aa11.04□□□□□ -0.64
SEMA3B-205ENST00000434030 IGKV3D-7A0A0C4DH55 119 aa11.03□□□□□ -0.64
SEMA3B-205ENST00000434030 C9orf118A6NHY6 69 aa10.99□□□□□ -0.65
SEMA3B-205ENST00000434030 SPINK7P58062 85 aa10.99□□□□□ -0.65
SEMA3B-205ENST00000434030 NREPQ16612 68 aa10.99□□□□□ -0.65
SEMA3B-205ENST00000434030 TAX1BP3O14907 124 aa10.96□□□□□ -0.65
SEMA3B-205ENST00000434030 PRR15Q8IV56 129 aa10.96□□□□□ -0.65
SEMA3B-205ENST00000434030 Q6ZVQ6 151 aa10.95□□□□□ -0.66
SEMA3B-205ENST00000434030 H3BT86 120 aa10.94□□□□□ -0.66
SEMA3B-205ENST00000434030 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
SEMA3B-205ENST00000434030 MTURNQ8N3F0 131 aa10.93□□□□□ -0.66
SEMA3B-205ENST00000434030 MT2AP02795 61 aa10.91□□□□□ -0.66
SEMA3B-205ENST00000434030 MMP24-AS1A0A0U1RRL7 71 aa10.88□□□□□ -0.67
SEMA3B-205ENST00000434030 MRPL34Q9BQ48 92 aaKnown RBP10.86□□□□□ -0.67
SEMA3B-205ENST00000434030 TMEM254Q8TBM7 123 aa10.85□□□□□ -0.67
SEMA3B-205ENST00000434030 K7EQZ3 153 aa10.83□□□□□ -0.68
SEMA3B-205ENST00000434030 MT1FP04733 61 aa10.83□□□□□ -0.68
SEMA3B-205ENST00000434030 WFDC13Q8IUB5 93 aa10.82□□□□□ -0.68
SEMA3B-205ENST00000434030 USH2AO75445 5202 aa10.81□□□□□ -0.68
SEMA3B-205ENST00000434030 hDV103S1A0JD37 113 aa10.81□□□□□ -0.68
SEMA3B-205ENST00000434030 BPY2O14599 106 aa10.78□□□□□ -0.68
SEMA3B-205ENST00000434030 KRTAP10-10P60014 251 aa10.78□□□□□ -0.68
SEMA3B-205ENST00000434030 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
SEMA3B-205ENST00000434030 NDUFS5O43920 106 aa10.75□□□□□ -0.69
SEMA3B-205ENST00000434030 KRTAP9-3Q9BYQ3 159 aa10.74□□□□□ -0.69
SEMA3B-205ENST00000434030 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
SEMA3B-205ENST00000434030 LCE2BO14633 110 aa10.7□□□□□ -0.7
SEMA3B-205ENST00000434030 SSPOA2VEC9 5147 aa10.7□□□□□ -0.7
SEMA3B-205ENST00000434030 Q8N9L7 120 aa10.67□□□□□ -0.7
SEMA3B-205ENST00000434030 Q5W150 140 aa10.66□□□□□ -0.7
SEMA3B-205ENST00000434030 COL5A1-AS1Q5SY13 56 aa10.65□□□□□ -0.7
SEMA3B-205ENST00000434030 CASC2Q6XLA1 102 aa10.63□□□□□ -0.71
SEMA3B-205ENST00000434030 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
SEMA3B-205ENST00000434030 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
SEMA3B-205ENST00000434030 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
SEMA3B-205ENST00000434030 H1FX-AS1Q4G0G2 97 aa10.6□□□□□ -0.71
SEMA3B-205ENST00000434030 HCG22E2RYF7 251 aa10.59□□□□□ -0.71
SEMA3B-205ENST00000434030 LINC00846Q9NV44 126 aa10.59□□□□□ -0.71
SEMA3B-205ENST00000434030 PCP4L1A6NKN8 68 aa10.58□□□□□ -0.72
SEMA3B-205ENST00000434030 K7EP34 96 aa10.58□□□□□ -0.72
SEMA3B-205ENST00000434030 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
SEMA3B-205ENST00000434030 UBL5Q9BZL1 73 aa10.56□□□□□ -0.72
SEMA3B-205ENST00000434030 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.52□□□□□ -0.73
SEMA3B-205ENST00000434030 KRTAP19-1Q8IUB9 90 aa10.52□□□□□ -0.73
SEMA3B-205ENST00000434030 CXCL6P80162 114 aa10.51□□□□□ -0.73
SEMA3B-205ENST00000434030 FCGBPQ9Y6R7 5405 aaPredicted RBP10.48□□□□□ -0.73
SEMA3B-205ENST00000434030 C4orf26Q17RF5 130 aa10.44□□□□□ -0.74
SEMA3B-205ENST00000434030 GTF2H5Q6ZYL4 71 aa10.44□□□□□ -0.74
SEMA3B-205ENST00000434030 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
SEMA3B-205ENST00000434030 F8W1H4 67 aa10.39□□□□□ -0.75
SEMA3B-205ENST00000434030 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
SEMA3B-205ENST00000434030 KRTAP19-6Q3LI70 58 aa10.32□□□□□ -0.76
SEMA3B-205ENST00000434030 KRTAP3-1Q9BYR8 98 aa10.31□□□□□ -0.76
SEMA3B-205ENST00000434030 TP53AIP1Q9HCN2 124 aa10.3□□□□□ -0.76
SEMA3B-205ENST00000434030 C5orf47Q569G3 176 aa10.25□□□□□ -0.77
SEMA3B-205ENST00000434030 C1orf64Q8NEQ6 169 aa10.25□□□□□ -0.77
SEMA3B-205ENST00000434030 S4R3F8 94 aa10.21□□□□□ -0.77
SEMA3B-205ENST00000434030 LCA10Q71F78 164 aa10.15□□□□□ -0.78
SEMA3B-205ENST00000434030 CSAG1Q6PB30 78 aa10.14□□□□□ -0.79
SEMA3B-205ENST00000434030 ACYP1P07311 99 aa10.13□□□□□ -0.79
SEMA3B-205ENST00000434030 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
SEMA3B-205ENST00000434030 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
SEMA3B-205ENST00000434030 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
SEMA3B-205ENST00000434030 MACF1Q9UPN3 7388 aaKnown RBP10.08□□□□□ -0.8
SEMA3B-205ENST00000434030 TRAV22A0A0B4J277 110 aa10.07□□□□□ -0.8
SEMA3B-205ENST00000434030 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
SEMA3B-205ENST00000434030 ATP5EP2Q5VTU8 51 aa10.03□□□□□ -0.8
SEMA3B-205ENST00000434030 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.81
SEMA3B-205ENST00000434030 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
SEMA3B-205ENST00000434030 HIST1H4AP62805 103 aaKnown RBP10.01□□□□□ -0.81
SEMA3B-205ENST00000434030 A0A1B0GV90 55 aa9.99□□□□□ -0.81
SEMA3B-205ENST00000434030 A0A087WVE0 104 aa9.97□□□□□ -0.81
SEMA3B-205ENST00000434030 SPRR2GQ9BYE4 73 aa9.97□□□□□ -0.81
SEMA3B-205ENST00000434030 SYNE2Q8WXH0 6885 aaKnown RBP9.96□□□□□ -0.81
SEMA3B-205ENST00000434030 UQCRQO14949 82 aa9.95□□□□□ -0.82
SEMA3B-205ENST00000434030 MT1BP07438 61 aa9.94□□□□□ -0.82
SEMA3B-205ENST00000434030 KLKP1Q107X0 134 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms