RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
SEMA3B-204ENST00000433753 A0A1B0GVX0 72 aa10.3□□□□□ -0.76
SEMA3B-204ENST00000433753 ASB16-AS1Q495Z4 193 aa10.3□□□□□ -0.76
SEMA3B-204ENST00000433753 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
SEMA3B-204ENST00000433753 CIRBP-AS1Q8TBR5 109 aa10.28□□□□□ -0.76
SEMA3B-204ENST00000433753 DNAH5Q8TE73 4624 aa10.28□□□□□ -0.76
SEMA3B-204ENST00000433753 IGLV7-43P04211 117 aa10.27□□□□□ -0.77
SEMA3B-204ENST00000433753 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
SEMA3B-204ENST00000433753 Q5VV11 94 aa10.26□□□□□ -0.77
SEMA3B-204ENST00000433753 KRTAP10-2P60368 255 aa10.25□□□□□ -0.77
SEMA3B-204ENST00000433753 CD164Q04900 197 aa10.24□□□□□ -0.77
SEMA3B-204ENST00000433753 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
SEMA3B-204ENST00000433753 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
SEMA3B-204ENST00000433753 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
SEMA3B-204ENST00000433753 TP53AIP1Q9HCN2 124 aa10.22□□□□□ -0.77
SEMA3B-204ENST00000433753 COA5Q86WW8 74 aa10.2□□□□□ -0.78
SEMA3B-204ENST00000433753 HYDINQ4G0P3 5121 aa10.2□□□□□ -0.78
SEMA3B-204ENST00000433753 LRP1BQ9NZR2 4599 aa10.19□□□□□ -0.78
SEMA3B-204ENST00000433753 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
SEMA3B-204ENST00000433753 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
SEMA3B-204ENST00000433753 Q5W150 140 aa10.16□□□□□ -0.78
SEMA3B-204ENST00000433753 A8MU10 97 aa10.14□□□□□ -0.79
SEMA3B-204ENST00000433753 PMAIP1Q13794 54 aa10.14□□□□□ -0.79
SEMA3B-204ENST00000433753 PKD1P98161 4303 aa10.11□□□□□ -0.79
SEMA3B-204ENST00000433753 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
SEMA3B-204ENST00000433753 Q75L30 129 aa10.09□□□□□ -0.79
SEMA3B-204ENST00000433753 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
SEMA3B-204ENST00000433753 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
SEMA3B-204ENST00000433753 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
SEMA3B-204ENST00000433753 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
SEMA3B-204ENST00000433753 RETNLBQ9BQ08 111 aa10.07□□□□□ -0.8
SEMA3B-204ENST00000433753 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
SEMA3B-204ENST00000433753 HRES1P13985 223 aa10.04□□□□□ -0.8
SEMA3B-204ENST00000433753 SPAG11AQ6PDA7 123 aa10.04□□□□□ -0.8
SEMA3B-204ENST00000433753 A6NED7 52 aa10.03□□□□□ -0.8
SEMA3B-204ENST00000433753 KRTAP13-3Q3SY46 172 aa10.03□□□□□ -0.8
SEMA3B-204ENST00000433753 SEC61GP60059 68 aa10.02□□□□□ -0.81
SEMA3B-204ENST00000433753 LCA10Q71F78 164 aa10.02□□□□□ -0.81
SEMA3B-204ENST00000433753 LINC01558Q9Y6Z2 57 aa10.02□□□□□ -0.81
SEMA3B-204ENST00000433753 LINC00313P59037 77 aa9.99□□□□□ -0.81
SEMA3B-204ENST00000433753 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
SEMA3B-204ENST00000433753 Q6ZSA8 131 aa9.97□□□□□ -0.81
SEMA3B-204ENST00000433753 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.81
SEMA3B-204ENST00000433753 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
SEMA3B-204ENST00000433753 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
SEMA3B-204ENST00000433753 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
SEMA3B-204ENST00000433753 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
SEMA3B-204ENST00000433753 C8orf87E5RJ46 101 aa9.93□□□□□ -0.82
SEMA3B-204ENST00000433753 PLA2G1BP04054 148 aaKnown RBP9.87□□□□□ -0.83
SEMA3B-204ENST00000433753 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
SEMA3B-204ENST00000433753 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
SEMA3B-204ENST00000433753 SPINK7P58062 85 aa9.85□□□□□ -0.83
SEMA3B-204ENST00000433753 FAM229AH3BQW9 127 aa9.84□□□□□ -0.83
SEMA3B-204ENST00000433753 A6NN06 94 aa9.84□□□□□ -0.83
SEMA3B-204ENST00000433753 ACYP2P14621 99 aa9.82□□□□□ -0.84
SEMA3B-204ENST00000433753 TYMSOSQ8TAI1 123 aa9.81□□□□□ -0.84
SEMA3B-204ENST00000433753 IGKV2-30P06310 120 aa9.8□□□□□ -0.84
SEMA3B-204ENST00000433753 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
SEMA3B-204ENST00000433753 IGKV2D-30A0A075B6S6 120 aa9.79□□□□□ -0.84
SEMA3B-204ENST00000433753 DMAC1Q96GE9 116 aa9.77□□□□□ -0.85
SEMA3B-204ENST00000433753 SACSQ9NZJ4 4579 aa9.76□□□□□ -0.85
SEMA3B-204ENST00000433753 SMR3BP02814 79 aaPredicted RBP9.75□□□□□ -0.85
SEMA3B-204ENST00000433753 FAT1Q14517 4588 aa9.72□□□□□ -0.85
SEMA3B-204ENST00000433753 SPINK1P00995 79 aa9.69□□□□□ -0.86
SEMA3B-204ENST00000433753 DYNC1H1Q14204 4646 aaKnown RBP9.69□□□□□ -0.86
SEMA3B-204ENST00000433753 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
SEMA3B-204ENST00000433753 RBM12B-AS1Q9P1G2 102 aa9.68□□□□□ -0.86
SEMA3B-204ENST00000433753 LINC00304Q8N9R0 145 aa9.64□□□□□ -0.87
SEMA3B-204ENST00000433753 A0A1B0GU69 56 aa9.62□□□□□ -0.87
SEMA3B-204ENST00000433753 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
SEMA3B-204ENST00000433753 Q8N1X5 172 aa9.58□□□□□ -0.88
SEMA3B-204ENST00000433753 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
SEMA3B-204ENST00000433753 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
SEMA3B-204ENST00000433753 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
SEMA3B-204ENST00000433753 UQCR11O14957 56 aa9.47□□□□□ -0.89
SEMA3B-204ENST00000433753 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
SEMA3B-204ENST00000433753 A0A1B0GVY2 172 aa9.46□□□□□ -0.9
SEMA3B-204ENST00000433753 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
SEMA3B-204ENST00000433753 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
SEMA3B-204ENST00000433753 KMT2CQ8NEZ4 4911 aaKnown RBP9.45□□□□□ -0.9
SEMA3B-204ENST00000433753 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
SEMA3B-204ENST00000433753 RYR2Q92736 4967 aa9.4□□□□□ -0.91
SEMA3B-204ENST00000433753 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
SEMA3B-204ENST00000433753 LRP1Q07954 4544 aaKnown RBP9.38□□□□□ -0.91
SEMA3B-204ENST00000433753 A8MUU9 505 aa9.37□□□□□ -0.91
SEMA3B-204ENST00000433753 ADM2Q7Z4H4 148 aa9.37□□□□□ -0.91
SEMA3B-204ENST00000433753 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
SEMA3B-204ENST00000433753 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
SEMA3B-204ENST00000433753 KRTAP3-1Q9BYR8 98 aa9.34□□□□□ -0.91
SEMA3B-204ENST00000433753 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
SEMA3B-204ENST00000433753 TNXBP22105 4242 aa9.23□□□□□ -0.93
SEMA3B-204ENST00000433753 FAT3Q8TDW7 4589 aa9.23□□□□□ -0.93
SEMA3B-204ENST00000433753 MYCBP2O75592 4640 aa9.22□□□□□ -0.93
SEMA3B-204ENST00000433753 HSPG2P98160 4391 aa9.21□□□□□ -0.93
SEMA3B-204ENST00000433753 LINC01554Q52M75 96 aa9.16□□□□□ -0.94
SEMA3B-204ENST00000433753 H0YAA0 97 aa9.13□□□□□ -0.95
SEMA3B-204ENST00000433753 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
SEMA3B-204ENST00000433753 RYR3Q15413 4870 aa9.1□□□□□ -0.95
SEMA3B-204ENST00000433753 Q5VSD8 79 aa9.09□□□□□ -0.95
SEMA3B-204ENST00000433753 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms