RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 K7EQZ3 153 aa14.74□□□□□ -0.05
TMEM248-205ENST00000433271 PRR4Q16378 134 aa14.74□□□□□ -0.05
TMEM248-205ENST00000433271 PRR15Q8IV56 129 aa14.74□□□□□ -0.05
TMEM248-205ENST00000433271 IGLV7-46A0A075B6I9 117 aa14.73□□□□□ -0.05
TMEM248-205ENST00000433271 Q8N9L7 120 aa14.73□□□□□ -0.05
TMEM248-205ENST00000433271 IGHV6-1A0A0B4J1U7 121 aa14.7□□□□□ -0.06
TMEM248-205ENST00000433271 MT-ATP8P03928 68 aa14.66□□□□□ -0.06
TMEM248-205ENST00000433271 HIST1H4AP62805 103 aaKnown RBP14.63□□□□□ -0.07
TMEM248-205ENST00000433271 C8orf87E5RJ46 101 aa14.62□□□□□ -0.07
TMEM248-205ENST00000433271 LINC00313P59037 77 aa14.61□□□□□ -0.07
TMEM248-205ENST00000433271 NOTCH2NLQ7Z3S9 236 aa14.61□□□□□ -0.07
TMEM248-205ENST00000433271 C8orf17Q9NRJ1 99 aa14.6□□□□□ -0.07
TMEM248-205ENST00000433271 HERC1Q15751 4861 aa14.59□□□□□ -0.07
TMEM248-205ENST00000433271 IMUPQ9GZP8 106 aa14.59□□□□□ -0.07
TMEM248-205ENST00000433271 KRTAP13-3Q3SY46 172 aa14.57□□□□□ -0.08
TMEM248-205ENST00000433271 C9orf92A6NGG3 77 aa14.56□□□□□ -0.08
TMEM248-205ENST00000433271 TPRXLQ17RH7 258 aa14.55□□□□□ -0.08
TMEM248-205ENST00000433271 MMP24-AS1A0A0U1RRL7 71 aa14.55□□□□□ -0.08
TMEM248-205ENST00000433271 A0A087WVE0 104 aa14.52□□□□□ -0.09
TMEM248-205ENST00000433271 HCG22E2RYF7 251 aa14.52□□□□□ -0.09
TMEM248-205ENST00000433271 hDV103S1A0JD37 113 aa14.48□□□□□ -0.09
TMEM248-205ENST00000433271 KRTAP16-1A8MUX0 517 aa14.47□□□□□ -0.09
TMEM248-205ENST00000433271 CASC2Q6XLA1 102 aa14.47□□□□□ -0.09
TMEM248-205ENST00000433271 WFDC13Q8IUB5 93 aa14.47□□□□□ -0.09
TMEM248-205ENST00000433271 TMEM254Q8TBM7 123 aa14.44□□□□□ -0.1
TMEM248-205ENST00000433271 MRPL34Q9BQ48 92 aaKnown RBP14.41□□□□□ -0.1
TMEM248-205ENST00000433271 XP32Q5T750 250 aa14.38□□□□□ -0.11
TMEM248-205ENST00000433271 Q8N9P0 234 aaPredicted RBP14.35□□□□□ -0.11
TMEM248-205ENST00000433271 C20orf166-AS1Q96NR2 134 aa14.34□□□□□ -0.11
TMEM248-205ENST00000433271 HMCN2Q8NDA2 5059 aa14.33□□□□□ -0.12
TMEM248-205ENST00000433271 LPAP08519 4548 aa14.32□□□□□ -0.12
TMEM248-205ENST00000433271 A8MUU9 505 aa14.32□□□□□ -0.12
TMEM248-205ENST00000433271 Q75L30 129 aa14.3□□□□□ -0.12
TMEM248-205ENST00000433271 FAM236AA0A1B0GUQ0 79 aa14.28□□□□□ -0.12
TMEM248-205ENST00000433271 FAM236BA0A1B0GV22 79 aa14.28□□□□□ -0.12
TMEM248-205ENST00000433271 NDUFS5O43920 106 aa14.26□□□□□ -0.13
TMEM248-205ENST00000433271 SCGB1A1P11684 91 aa14.24□□□□□ -0.13
TMEM248-205ENST00000433271 RPL37P61927 97 aaKnown RBP14.24□□□□□ -0.13
TMEM248-205ENST00000433271 TP53AIP1Q9HCN2 124 aa14.19□□□□□ -0.14
TMEM248-205ENST00000433271 LRP2P98164 4655 aa14.19□□□□□ -0.14
TMEM248-205ENST00000433271 OCR1Q9BZK8 76 aa14.14□□□□□ -0.15
TMEM248-205ENST00000433271 ATP11AUNQ6ZP68 121 aa14.13□□□□□ -0.15
TMEM248-205ENST00000433271 ATOX1O00244 68 aa14.11□□□□□ -0.15
TMEM248-205ENST00000433271 ZCCHC13Q8WW36 166 aaKnown RBP14.11□□□□□ -0.15
TMEM248-205ENST00000433271 UQCRQO14949 82 aa14.08□□□□□ -0.15
TMEM248-205ENST00000433271 SMIM20Q8N5G0 67 aa14.08□□□□□ -0.16
TMEM248-205ENST00000433271 SEC61BP60468 96 aaKnown RBP14.06□□□□□ -0.16
TMEM248-205ENST00000433271 Q5W150 140 aa14.06□□□□□ -0.16
TMEM248-205ENST00000433271 PCOTHQ58A44 107 aa14.04□□□□□ -0.16
TMEM248-205ENST00000433271 TRAV7A0A075B6U4 112 aa14.01□□□□□ -0.17
TMEM248-205ENST00000433271 TRAV22A0A0B4J277 110 aa13.98□□□□□ -0.17
TMEM248-205ENST00000433271 C5orf47Q569G3 176 aa13.94□□□□□ -0.18
TMEM248-205ENST00000433271 SERP2Q8N6R1 65 aa13.93□□□□□ -0.18
TMEM248-205ENST00000433271 H0Y9P7 68 aa13.91□□□□□ -0.18
TMEM248-205ENST00000433271 MP68P56378 58 aa13.88□□□□□ -0.19
TMEM248-205ENST00000433271 ANAPC13Q9BS18 74 aa13.86□□□□□ -0.19
TMEM248-205ENST00000433271 MUC17Q685J3 4493 aa13.85□□□□□ -0.19
TMEM248-205ENST00000433271 IGKV2-30P06310 120 aa13.8□□□□□ -0.2
TMEM248-205ENST00000433271 SPINK7P58062 85 aa13.8□□□□□ -0.2
TMEM248-205ENST00000433271 LINC00208Q96KT6 92 aa13.8□□□□□ -0.2
TMEM248-205ENST00000433271 IGKV2D-30A0A075B6S6 120 aa13.79□□□□□ -0.2
TMEM248-205ENST00000433271 H3BPC8 53 aa13.79□□□□□ -0.2
TMEM248-205ENST00000433271 C1orf64Q8NEQ6 169 aa13.79□□□□□ -0.2
TMEM248-205ENST00000433271 LOC101927531A0A1B0GV80 90 aa13.78□□□□□ -0.2
TMEM248-205ENST00000433271 COX7CP15954 63 aa13.78□□□□□ -0.2
TMEM248-205ENST00000433271 C7orf65Q6ZTY9 151 aa13.77□□□□□ -0.21
TMEM248-205ENST00000433271 UBR4Q5T4S7 5183 aa13.75□□□□□ -0.21
TMEM248-205ENST00000433271 KRTAP4-1Q9BYQ7 146 aa13.74□□□□□ -0.21
TMEM248-205ENST00000433271 CYP4F30PQ9H0H9 118 aa13.73□□□□□ -0.21
TMEM248-205ENST00000433271 A0A0U1RQV1 116 aa13.69□□□□□ -0.22
TMEM248-205ENST00000433271 C20orf197Q8N268 126 aa13.68□□□□□ -0.22
TMEM248-205ENST00000433271 SNURFQ9Y675 71 aa13.63□□□□□ -0.23
TMEM248-205ENST00000433271 KLKP1Q107X0 134 aa13.6□□□□□ -0.23
TMEM248-205ENST00000433271 HRES1P13985 223 aa13.58□□□□□ -0.24
TMEM248-205ENST00000433271 MUC2Q02817 5179 aa13.57□□□□□ -0.24
TMEM248-205ENST00000433271 RNF213Q63HN8 5207 aa13.54□□□□□ -0.24
TMEM248-205ENST00000433271 CCDC179H3BU77 68 aa13.53□□□□□ -0.24
TMEM248-205ENST00000433271 MPLKIPQ8TAP9 179 aa13.5□□□□□ -0.25
TMEM248-205ENST00000433271 C4orf26Q17RF5 130 aa13.46□□□□□ -0.25
TMEM248-205ENST00000433271 RBM12B-AS1Q9P1G2 102 aa13.44□□□□□ -0.26
TMEM248-205ENST00000433271 NDUFC1O43677 76 aa13.42□□□□□ -0.26
TMEM248-205ENST00000433271 CYSTM1Q9H1C7 97 aa13.42□□□□□ -0.26
TMEM248-205ENST00000433271 PCP4P48539 62 aa13.4□□□□□ -0.26
TMEM248-205ENST00000433271 COX6B2Q6YFQ2 88 aa13.38□□□□□ -0.27
TMEM248-205ENST00000433271 H7BZZ5 65 aa13.35□□□□□ -0.27
TMEM248-205ENST00000433271 KRTAP19-2Q3LHN2 52 aa13.31□□□□□ -0.28
TMEM248-205ENST00000433271 FAM236DA0A1B0GTK5 79 aa13.31□□□□□ -0.28
TMEM248-205ENST00000433271 FAM236CP0DP71 79 aa13.31□□□□□ -0.28
TMEM248-205ENST00000433271 SPANXA2-OT1Q8N9U9 137 aa13.29□□□□□ -0.28
TMEM248-205ENST00000433271 KRTAP3-1Q9BYR8 98 aa13.28□□□□□ -0.28
TMEM248-205ENST00000433271 A8MUN3 132 aa13.21□□□□□ -0.29
TMEM248-205ENST00000433271 H1FX-AS1Q4G0G2 97 aa13.2□□□□□ -0.3
TMEM248-205ENST00000433271 DMAC1Q96GE9 116 aa13.2□□□□□ -0.3
TMEM248-205ENST00000433271 LCE2CQ5TA81 110 aa13.19□□□□□ -0.3
TMEM248-205ENST00000433271 ACYP2P14621 99 aa13.08□□□□□ -0.32
TMEM248-205ENST00000433271 TMEM258P61165 79 aa13.08□□□□□ -0.32
TMEM248-205ENST00000433271 FAT4Q6V0I7 4981 aa13.04□□□□□ -0.32
TMEM248-205ENST00000433271 ATP5EP56381 51 aaPredicted RBP13.02□□□□□ -0.33
TMEM248-205ENST00000433271 FLGP20930 4061 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-205ENST00000433271 S4R3F8 94 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms