RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
CDH13-203ENST00000431540 H3BMG7 143 aa4.09□□□□□ -1.75
CDH13-203ENST00000431540 DLEU1O43261 78 aa4.09□□□□□ -1.75
CDH13-203ENST00000431540 MT1FP04733 61 aa4.09□□□□□ -1.75
CDH13-203ENST00000431540 HRES1P13985 223 aa4.09□□□□□ -1.75
CDH13-203ENST00000431540 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
CDH13-203ENST00000431540 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
CDH13-203ENST00000431540 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
CDH13-203ENST00000431540 HIST1H4GQ99525 98 aa4.08□□□□□ -1.76
CDH13-203ENST00000431540 RAB37Q96AX2 223 aa4.07□□□□□ -1.76
CDH13-203ENST00000431540 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 A8MWP4 228 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 C8orf87E5RJ46 101 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 IGKV4-1P06312 121 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 S100A2P29034 98 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 DSCR10P59022 87 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
CDH13-203ENST00000431540 A0A1W2PNM2 257 aa4.05□□□□□ -1.76
CDH13-203ENST00000431540 COX8AP10176 69 aa4.05□□□□□ -1.76
CDH13-203ENST00000431540 ANKRD29Q8N6D5 301 aa4.05□□□□□ -1.76
CDH13-203ENST00000431540 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
CDH13-203ENST00000431540 TMEM256-PLSCR3K7ERE1 68 aa4.04□□□□□ -1.76
CDH13-203ENST00000431540 SIGMAR1Q99720 223 aa4.04□□□□□ -1.76
CDH13-203ENST00000431540 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
CDH13-203ENST00000431540 HIST3H2BBQ8N257 126 aa4.03□□□□□ -1.76
CDH13-203ENST00000431540 HIST1H2BLQ99880 126 aa4.03□□□□□ -1.76
CDH13-203ENST00000431540 FABP2P12104 132 aa4.02□□□□□ -1.77
CDH13-203ENST00000431540 PYY3Q5JQD4 70 aa4.02□□□□□ -1.77
CDH13-203ENST00000431540 PRO1854Q9UHT4 67 aa4.02□□□□□ -1.77
CDH13-203ENST00000431540 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
CDH13-203ENST00000431540 TSTD3H0UI37 97 aa4.01□□□□□ -1.77
CDH13-203ENST00000431540 J3KT08 172 aa4.01□□□□□ -1.77
CDH13-203ENST00000431540 FAM218AQ96MZ4 157 aa4.01□□□□□ -1.77
CDH13-203ENST00000431540 A0A1B0GW54 56 aa4□□□□□ -1.77
CDH13-203ENST00000431540 SPINK7P58062 85 aa4□□□□□ -1.77
CDH13-203ENST00000431540 UBE2V1Q13404 147 aa4□□□□□ -1.77
CDH13-203ENST00000431540 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
CDH13-203ENST00000431540 ORMDL1Q9P0S3 153 aa4□□□□□ -1.77
CDH13-203ENST00000431540 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
CDH13-203ENST00000431540 DNAL4O96015 105 aa3.99□□□□□ -1.77
CDH13-203ENST00000431540 TRACP01848 142 aa3.99□□□□□ -1.77
CDH13-203ENST00000431540 IGHV6-1A0A0B4J1U7 121 aa3.98□□□□□ -1.77
CDH13-203ENST00000431540 CCKP06307 115 aa3.98□□□□□ -1.77
CDH13-203ENST00000431540 COX6CP09669 75 aa3.98□□□□□ -1.77
CDH13-203ENST00000431540 C14orf144Q96I85 54 aa3.98□□□□□ -1.77
CDH13-203ENST00000431540 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
CDH13-203ENST00000431540 CEND1Q8N111 149 aa3.97□□□□□ -1.77
CDH13-203ENST00000431540 NDUFB1O75438 58 aa3.96□□□□□ -1.78
CDH13-203ENST00000431540 A0A1B0GV90 55 aa3.94□□□□□ -1.78
CDH13-203ENST00000431540 TRIAP1O43715 76 aa3.94□□□□□ -1.78
CDH13-203ENST00000431540 RBM3P98179 157 aaKnown RBP3.94□□□□□ -1.78
CDH13-203ENST00000431540 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
CDH13-203ENST00000431540 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
CDH13-203ENST00000431540 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
CDH13-203ENST00000431540 C2orf91Q6ZV80 131 aa3.92□□□□□ -1.78
CDH13-203ENST00000431540 H1FX-AS1Q4G0G2 97 aa3.91□□□□□ -1.78
CDH13-203ENST00000431540 Q6ZQT0 140 aa3.91□□□□□ -1.78
CDH13-203ENST00000431540 C9JAW5 83 aa3.9□□□□□ -1.79
CDH13-203ENST00000431540 M0R143 59 aa3.9□□□□□ -1.79
CDH13-203ENST00000431540 PDE6GP18545 87 aa3.9□□□□□ -1.79
CDH13-203ENST00000431540 PSMB2P49721 201 aa3.9□□□□□ -1.79
CDH13-203ENST00000431540 SPATA45Q537H7 98 aa3.9□□□□□ -1.79
CDH13-203ENST00000431540 IGKV3D-7A0A0C4DH55 119 aa3.89□□□□□ -1.79
CDH13-203ENST00000431540 VAMP8Q9BV40 100 aa3.89□□□□□ -1.79
CDH13-203ENST00000431540 LYRM7Q5U5X0 104 aa3.88□□□□□ -1.79
CDH13-203ENST00000431540 JMJD7-PLA2G4BH0Y9G9 81 aa3.87□□□□□ -1.79
CDH13-203ENST00000431540 FXYD2P54710 66 aa3.87□□□□□ -1.79
CDH13-203ENST00000431540 C8orf17Q9NRJ1 99 aa3.87□□□□□ -1.79
CDH13-203ENST00000431540 PAM16Q9Y3D7 125 aa3.87□□□□□ -1.79
CDH13-203ENST00000431540 HSD52Q0P140 79 aa3.86□□□□□ -1.79
CDH13-203ENST00000431540 Q6ZVQ6 151 aa3.86□□□□□ -1.79
CDH13-203ENST00000431540 COL5A1-AS1Q5SY13 56 aa3.85□□□□□ -1.79
CDH13-203ENST00000431540 VPS25Q9BRG1 176 aa3.85□□□□□ -1.79
CDH13-203ENST00000431540 UQCR10Q9UDW1 63 aa3.85□□□□□ -1.79
CDH13-203ENST00000431540 LOC110117498A0A087WWA1 95 aa3.84□□□□□ -1.79
CDH13-203ENST00000431540 BAALC-AS2P0C853 105 aa3.84□□□□□ -1.79
CDH13-203ENST00000431540 PRR15Q8IV56 129 aa3.84□□□□□ -1.79
CDH13-203ENST00000431540 TMEM254Q8TBM7 123 aa3.84□□□□□ -1.79
CDH13-203ENST00000431540 BATFQ16520 125 aa3.83□□□□□ -1.8
CDH13-203ENST00000431540 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
CDH13-203ENST00000431540 SCGB1C2P0DMR2 95 aa3.82□□□□□ -1.8
CDH13-203ENST00000431540 A0A1B0GV72 72 aa3.81□□□□□ -1.8
CDH13-203ENST00000431540 A6NN06 94 aa3.79□□□□□ -1.8
CDH13-203ENST00000431540 NREPQ16612 68 aa3.79□□□□□ -1.8
CDH13-203ENST00000431540 C7orf65Q6ZTY9 151 aa3.79□□□□□ -1.8
CDH13-203ENST00000431540 hDV103S1A0JD37 113 aa3.78□□□□□ -1.8
CDH13-203ENST00000431540 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
CDH13-203ENST00000431540 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
CDH13-203ENST00000431540 MMP24-AS1A0A0U1RRL7 71 aa3.77□□□□□ -1.81
CDH13-203ENST00000431540 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
CDH13-203ENST00000431540 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
CDH13-203ENST00000431540 Q5VV11 94 aa3.77□□□□□ -1.81
CDH13-203ENST00000431540 K7ERJ3 54 aa3.76□□□□□ -1.81
CDH13-203ENST00000431540 NEBP20929 6669 aa3.76□□□□□ -1.81
CDH13-203ENST00000431540 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
CDH13-203ENST00000431540 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
CDH13-203ENST00000431540 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
CDH13-203ENST00000431540 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
CDH13-203ENST00000431540 TAX1BP3O14907 124 aa3.73□□□□□ -1.81
CDH13-203ENST00000431540 NDUFS5O43920 106 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms