RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 TNRC18O15417 2968 aaPredicted RBP6.9□□□□□ -1.31
RIMKLA-202ENST00000431473 CELSR2Q9HCU4 2923 aa6.89□□□□□ -1.31
RIMKLA-202ENST00000431473 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
RIMKLA-202ENST00000431473 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
RIMKLA-202ENST00000431473 LOC400499M0QZD8 3231 aa6.87□□□□□ -1.31
RIMKLA-202ENST00000431473 Q5VSD8 79 aa6.87□□□□□ -1.31
RIMKLA-202ENST00000431473 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
RIMKLA-202ENST00000431473 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
RIMKLA-202ENST00000431473 PANO1I0J062 215 aa6.85□□□□□ -1.31
RIMKLA-202ENST00000431473 A0A087X002 238 aa6.85□□□□□ -1.31
RIMKLA-202ENST00000431473 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
RIMKLA-202ENST00000431473 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
RIMKLA-202ENST00000431473 CSMD1Q96PZ7 3565 aa6.85□□□□□ -1.31
RIMKLA-202ENST00000431473 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.32
RIMKLA-202ENST00000431473 SEC61BP60468 96 aaKnown RBP6.83□□□□□ -1.32
RIMKLA-202ENST00000431473 FLNCQ14315 2725 aa6.82□□□□□ -1.32
RIMKLA-202ENST00000431473 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
RIMKLA-202ENST00000431473 A6NN06 94 aa6.8□□□□□ -1.32
RIMKLA-202ENST00000431473 DMDP11532 3685 aa6.79□□□□□ -1.32
RIMKLA-202ENST00000431473 A8MU10 97 aa6.79□□□□□ -1.32
RIMKLA-202ENST00000431473 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
RIMKLA-202ENST00000431473 RELNP78509 3460 aa6.77□□□□□ -1.33
RIMKLA-202ENST00000431473 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
RIMKLA-202ENST00000431473 SPENQ96T58 3664 aaKnown RBP6.76□□□□□ -1.33
RIMKLA-202ENST00000431473 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
RIMKLA-202ENST00000431473 NBPF19A0A087WUL8 3843 aa6.72□□□□□ -1.33
RIMKLA-202ENST00000431473 FBN2P35556 2912 aa6.72□□□□□ -1.33
RIMKLA-202ENST00000431473 SMG1Q96Q15 3661 aaKnown RBP6.72□□□□□ -1.33
RIMKLA-202ENST00000431473 DCHS2Q6V1P9 2916 aa6.71□□□□□ -1.34
RIMKLA-202ENST00000431473 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
RIMKLA-202ENST00000431473 ZANQ9Y493 2812 aa6.7□□□□□ -1.34
RIMKLA-202ENST00000431473 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
RIMKLA-202ENST00000431473 CELSR1Q9NYQ6 3014 aa6.66□□□□□ -1.34
RIMKLA-202ENST00000431473 A8MUU9 505 aa6.66□□□□□ -1.34
RIMKLA-202ENST00000431473 LCE6AA0A183 80 aa6.65□□□□□ -1.35
RIMKLA-202ENST00000431473 HRNRQ86YZ3 2850 aaPredicted RBP6.64□□□□□ -1.35
RIMKLA-202ENST00000431473 NIPBLQ6KC79 2804 aaeCLIP6.63□□□□□ -1.35
RIMKLA-202ENST00000431473 NF1P21359 2839 aa6.63□□□□□ -1.35
RIMKLA-202ENST00000431473 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
RIMKLA-202ENST00000431473 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
RIMKLA-202ENST00000431473 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
RIMKLA-202ENST00000431473 CUBNO60494 3623 aa6.54□□□□□ -1.36
RIMKLA-202ENST00000431473 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
RIMKLA-202ENST00000431473 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
RIMKLA-202ENST00000431473 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
RIMKLA-202ENST00000431473 Q6ZRN7 208 aaPredicted RBP6.52□□□□□ -1.37
RIMKLA-202ENST00000431473 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
RIMKLA-202ENST00000431473 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
RIMKLA-202ENST00000431473 TGP01266 2768 aa6.48□□□□□ -1.37
RIMKLA-202ENST00000431473 PDZD2O15018 2839 aa6.47□□□□□ -1.37
RIMKLA-202ENST00000431473 TNP1P09430 55 aa6.42□□□□□ -1.38
RIMKLA-202ENST00000431473 ZFHX3Q15911 3703 aa6.35□□□□□ -1.39
RIMKLA-202ENST00000431473 VWFP04275 2813 aa6.35□□□□□ -1.39
RIMKLA-202ENST00000431473 H0YAA0 97 aa6.34□□□□□ -1.39
RIMKLA-202ENST00000431473 VPS13CQ709C8 3753 aa6.34□□□□□ -1.39
RIMKLA-202ENST00000431473 TENM4Q6N022 2769 aa6.31□□□□□ -1.4
RIMKLA-202ENST00000431473 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
RIMKLA-202ENST00000431473 TENM3Q9P273 2699 aa6.28□□□□□ -1.4
RIMKLA-202ENST00000431473 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
RIMKLA-202ENST00000431473 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
RIMKLA-202ENST00000431473 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
RIMKLA-202ENST00000431473 A0A1B0GVY2 172 aa6.21□□□□□ -1.42
RIMKLA-202ENST00000431473 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
RIMKLA-202ENST00000431473 P0C880 135 aa6.19□□□□□ -1.42
RIMKLA-202ENST00000431473 XP32Q5T750 250 aa6.18□□□□□ -1.42
RIMKLA-202ENST00000431473 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
RIMKLA-202ENST00000431473 BSNQ9UPA5 3926 aa6.14□□□□□ -1.43
RIMKLA-202ENST00000431473 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
RIMKLA-202ENST00000431473 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
RIMKLA-202ENST00000431473 CSMD3Q7Z407 3707 aa6.06□□□□□ -1.44
RIMKLA-202ENST00000431473 FBN1P35555 2871 aaKnown RBP6.05□□□□□ -1.44
RIMKLA-202ENST00000431473 TENM2Q9NT68 2774 aa6.04□□□□□ -1.44
RIMKLA-202ENST00000431473 COL7A1Q02388 2944 aa6.01□□□□□ -1.45
RIMKLA-202ENST00000431473 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
RIMKLA-202ENST00000431473 AKAP9Q99996 3911 aa5.97□□□□□ -1.45
RIMKLA-202ENST00000431473 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
RIMKLA-202ENST00000431473 KRTAP12-2P59991 146 aa5.96□□□□□ -1.45
RIMKLA-202ENST00000431473 MEGF8Q7Z7M0 2845 aa5.94□□□□□ -1.46
RIMKLA-202ENST00000431473 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
RIMKLA-202ENST00000431473 OTOGQ6ZRI0 2925 aa5.91□□□□□ -1.46
RIMKLA-202ENST00000431473 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
RIMKLA-202ENST00000431473 FBN3Q75N90 2809 aa5.87□□□□□ -1.47
RIMKLA-202ENST00000431473 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
RIMKLA-202ENST00000431473 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
RIMKLA-202ENST00000431473 KRTAP21-3Q3LHN1 58 aa5.74□□□□□ -1.49
RIMKLA-202ENST00000431473 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
RIMKLA-202ENST00000431473 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
RIMKLA-202ENST00000431473 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
RIMKLA-202ENST00000431473 ANK3Q12955 4377 aaKnown RBP5.52□□□□□ -1.53
RIMKLA-202ENST00000431473 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
RIMKLA-202ENST00000431473 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
RIMKLA-202ENST00000431473 FRAS1Q86XX4 4008 aa5.34□□□□□ -1.55
RIMKLA-202ENST00000431473 LYSTQ99698 3801 aa5.34□□□□□ -1.55
RIMKLA-202ENST00000431473 INE1O15225 51 aa5.34□□□□□ -1.56
RIMKLA-202ENST00000431473 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
RIMKLA-202ENST00000431473 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
RIMKLA-202ENST00000431473 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
RIMKLA-202ENST00000431473 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
RIMKLA-202ENST00000431473 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
RIMKLA-202ENST00000431473 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms