RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 KALRNO60229 2985 aa3.72□□□□□ -1.81
CHD8-202ENST00000430710 DMXL2Q8TDJ6 3036 aa3.72□□□□□ -1.81
CHD8-202ENST00000430710 UNC79Q9P2D8 2635 aa3.71□□□□□ -1.81
CHD8-202ENST00000430710 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
CHD8-202ENST00000430710 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
CHD8-202ENST00000430710 TEP1Q99973 2627 aaKnown RBP3.7□□□□□ -1.82
CHD8-202ENST00000430710 LRBAP50851 2863 aa3.69□□□□□ -1.82
CHD8-202ENST00000430710 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
CHD8-202ENST00000430710 A8MU10 97 aa3.69□□□□□ -1.82
CHD8-202ENST00000430710 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
CHD8-202ENST00000430710 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CHD8-202ENST00000430710 COL6A5A8TX70 2615 aa3.66□□□□□ -1.82
CHD8-202ENST00000430710 CSMD2Q7Z408 3487 aa3.66□□□□□ -1.82
CHD8-202ENST00000430710 KRTAP10-2P60368 255 aa3.65□□□□□ -1.83
CHD8-202ENST00000430710 R4GN34 69 aa3.65□□□□□ -1.83
CHD8-202ENST00000430710 KMT2BQ9UMN6 2715 aaPredicted RBP3.65□□□□□ -1.83
CHD8-202ENST00000430710 ITPR1Q14643 2758 aa3.63□□□□□ -1.83
CHD8-202ENST00000430710 NBEAL2Q6ZNJ1 2754 aa3.62□□□□□ -1.83
CHD8-202ENST00000430710 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
CHD8-202ENST00000430710 ZNF469Q96JG9 3925 aaPredicted RBP3.61□□□□□ -1.83
CHD8-202ENST00000430710 PANO1I0J062 215 aa3.61□□□□□ -1.83
CHD8-202ENST00000430710 CUBNO60494 3623 aa3.61□□□□□ -1.83
CHD8-202ENST00000430710 APCP25054 2843 aa3.61□□□□□ -1.83
CHD8-202ENST00000430710 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
CHD8-202ENST00000430710 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.84
CHD8-202ENST00000430710 KRTAP21-3Q3LHN1 58 aa3.59□□□□□ -1.84
CHD8-202ENST00000430710 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
CHD8-202ENST00000430710 M0QZ58 72 aa3.57□□□□□ -1.84
CHD8-202ENST00000430710 NBEAQ8NFP9 2946 aa3.57□□□□□ -1.84
CHD8-202ENST00000430710 IGSF10Q6WRI0 2623 aa3.54□□□□□ -1.84
CHD8-202ENST00000430710 NSD1Q96L73 2696 aaPredicted RBP3.53□□□□□ -1.84
CHD8-202ENST00000430710 ITPR2Q14571 2701 aa3.53□□□□□ -1.84
CHD8-202ENST00000430710 ZNF292O60281 2723 aa3.53□□□□□ -1.85
CHD8-202ENST00000430710 KRTAP11-1Q8IUC1 163 aa3.52□□□□□ -1.85
CHD8-202ENST00000430710 A8MUU9 505 aa3.52□□□□□ -1.85
CHD8-202ENST00000430710 TACC2O95359 2948 aa3.51□□□□□ -1.85
CHD8-202ENST00000430710 KRTAP7-1Q8IUC3 87 aa3.51□□□□□ -1.85
CHD8-202ENST00000430710 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
CHD8-202ENST00000430710 CMYA5Q8N3K9 4069 aa3.5□□□□□ -1.85
CHD8-202ENST00000430710 CELSR1Q9NYQ6 3014 aa3.5□□□□□ -1.85
CHD8-202ENST00000430710 UBR5O95071 2799 aaPredicted RBP3.49□□□□□ -1.85
CHD8-202ENST00000430710 DCHS2Q6V1P9 2916 aa3.47□□□□□ -1.85
CHD8-202ENST00000430710 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
CHD8-202ENST00000430710 C20orf166-AS1Q96NR2 134 aa3.46□□□□□ -1.86
CHD8-202ENST00000430710 ANK2Q01484 3957 aa3.44□□□□□ -1.86
CHD8-202ENST00000430710 UTP20O75691 2785 aaKnown RBP3.44□□□□□ -1.86
CHD8-202ENST00000430710 Q6ZRN7 208 aaPredicted RBP3.44□□□□□ -1.86
CHD8-202ENST00000430710 KRTAP13-2Q52LG2 175 aa3.41□□□□□ -1.86
CHD8-202ENST00000430710 HRNRQ86YZ3 2850 aaPredicted RBP3.41□□□□□ -1.86
CHD8-202ENST00000430710 H0YAA0 97 aa3.4□□□□□ -1.87
CHD8-202ENST00000430710 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
CHD8-202ENST00000430710 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
CHD8-202ENST00000430710 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
CHD8-202ENST00000430710 TNP1P09430 55 aa3.38□□□□□ -1.87
CHD8-202ENST00000430710 FLNCQ14315 2725 aa3.37□□□□□ -1.87
CHD8-202ENST00000430710 CELSR2Q9HCU4 2923 aa3.36□□□□□ -1.87
CHD8-202ENST00000430710 P0C880 135 aa3.36□□□□□ -1.87
CHD8-202ENST00000430710 TENM4Q6N022 2769 aa3.32□□□□□ -1.88
CHD8-202ENST00000430710 NIPBLQ6KC79 2804 aaeCLIP3.31□□□□□ -1.881e-8■■■□□ 18.9
CHD8-202ENST00000430710 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
CHD8-202ENST00000430710 TRRAPQ9Y4A5 3859 aa3.29□□□□□ -1.88
CHD8-202ENST00000430710 TENM1Q9UKZ4 2725 aa3.29□□□□□ -1.88
CHD8-202ENST00000430710 LYSTQ99698 3801 aa3.28□□□□□ -1.88
CHD8-202ENST00000430710 TGP01266 2768 aa3.27□□□□□ -1.89
CHD8-202ENST00000430710 ZANQ9Y493 2812 aa3.27□□□□□ -1.89
CHD8-202ENST00000430710 FBN2P35556 2912 aa3.26□□□□□ -1.89
CHD8-202ENST00000430710 CSMD3Q7Z407 3707 aa3.26□□□□□ -1.89
CHD8-202ENST00000430710 NF1P21359 2839 aa3.26□□□□□ -1.89
CHD8-202ENST00000430710 KRTAP13-3Q3SY46 172 aa3.25□□□□□ -1.89
CHD8-202ENST00000430710 ANK3Q12955 4377 aaKnown RBP3.24□□□□□ -1.89
CHD8-202ENST00000430710 VWFP04275 2813 aa3.24□□□□□ -1.89
CHD8-202ENST00000430710 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
CHD8-202ENST00000430710 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
CHD8-202ENST00000430710 PKD1L1Q8TDX9 2849 aa3.23□□□□□ -1.89
CHD8-202ENST00000430710 TENM3Q9P273 2699 aa3.22□□□□□ -1.89
CHD8-202ENST00000430710 XP32Q5T750 250 aa3.19□□□□□ -1.9
CHD8-202ENST00000430710 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
CHD8-202ENST00000430710 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
CHD8-202ENST00000430710 PDZD2O15018 2839 aa3.17□□□□□ -1.9
CHD8-202ENST00000430710 DNAH3Q8TD57 4116 aa3.16□□□□□ -1.9
CHD8-202ENST00000430710 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
CHD8-202ENST00000430710 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
CHD8-202ENST00000430710 MXRA5Q9NR99 2828 aa3.15□□□□□ -1.91
CHD8-202ENST00000430710 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
CHD8-202ENST00000430710 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
CHD8-202ENST00000430710 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
CHD8-202ENST00000430710 KRTAP3-3Q9BYR6 98 aa3.11□□□□□ -1.91
CHD8-202ENST00000430710 KRTAP3-2Q9BYR7 98 aa3.11□□□□□ -1.91
CHD8-202ENST00000430710 PRKDCP78527 4128 aaKnown RBP3.1□□□□□ -1.91
CHD8-202ENST00000430710 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
CHD8-202ENST00000430710 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
CHD8-202ENST00000430710 KMT2AQ03164 3969 aa3.09□□□□□ -1.91
CHD8-202ENST00000430710 SRRM2Q9UQ35 2752 aaKnown RBP3.07□□□□□ -1.92
CHD8-202ENST00000430710 HECTD4Q9Y4D8 3996 aa3.07□□□□□ -1.92
CHD8-202ENST00000430710 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
CHD8-202ENST00000430710 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
CHD8-202ENST00000430710 LORP23490 312 aaPredicted RBP3.04□□□□□ -1.92
CHD8-202ENST00000430710 HUWE1Q7Z6Z7 4374 aaKnown RBP3.03□□□□□ -1.92
CHD8-202ENST00000430710 KRTAP15-1Q3LI76 137 aa3.03□□□□□ -1.92
CHD8-202ENST00000430710 KRTAP3-1Q9BYR8 98 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms