RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 J3KT08 172 aa13.45□□□□□ -0.26
CPNE1-212ENST00000430570 LINC00313P59037 77 aa13.44□□□□□ -0.26
CPNE1-212ENST00000430570 NREPQ16612 68 aa13.44□□□□□ -0.26
CPNE1-212ENST00000430570 IGHV6-1A0A0B4J1U7 121 aa13.43□□□□□ -0.26
CPNE1-212ENST00000430570 A0A1B0GVX0 72 aa13.41□□□□□ -0.26
CPNE1-212ENST00000430570 Q75L30 129 aa13.41□□□□□ -0.26
CPNE1-212ENST00000430570 ETDBQ3ZM63 59 aa13.4□□□□□ -0.26
CPNE1-212ENST00000430570 KRTAP16-1A8MUX0 517 aa13.39□□□□□ -0.27
CPNE1-212ENST00000430570 C20orf166-AS1Q96NR2 134 aa13.39□□□□□ -0.27
CPNE1-212ENST00000430570 A8MUU9 505 aa13.37□□□□□ -0.27
CPNE1-212ENST00000430570 A0A1B0GV90 55 aa13.36□□□□□ -0.27
CPNE1-212ENST00000430570 A8MWP4 228 aa13.35□□□□□ -0.27
CPNE1-212ENST00000430570 C8orf87E5RJ46 101 aa13.34□□□□□ -0.27
CPNE1-212ENST00000430570 IGKV3D-7A0A0C4DH55 119 aa13.33□□□□□ -0.28
CPNE1-212ENST00000430570 NDUFB1O75438 58 aa13.33□□□□□ -0.28
CPNE1-212ENST00000430570 Q6ZVQ6 151 aa13.32□□□□□ -0.28
CPNE1-212ENST00000430570 LINC00846Q9NV44 126 aa13.3□□□□□ -0.28
CPNE1-212ENST00000430570 ATP11AUNQ6ZP68 121 aa13.29□□□□□ -0.28
CPNE1-212ENST00000430570 PRR15Q8IV56 129 aa13.26□□□□□ -0.29
CPNE1-212ENST00000430570 C8orf17Q9NRJ1 99 aa13.25□□□□□ -0.29
CPNE1-212ENST00000430570 BPY2O14599 106 aa13.24□□□□□ -0.29
CPNE1-212ENST00000430570 K7EQZ3 153 aa13.21□□□□□ -0.29
CPNE1-212ENST00000430570 A0A0U1RQV1 116 aa13.2□□□□□ -0.3
CPNE1-212ENST00000430570 UBL5Q9BZL1 73 aa13.19□□□□□ -0.3
CPNE1-212ENST00000430570 FAT4Q6V0I7 4981 aa13.19□□□□□ -0.3
CPNE1-212ENST00000430570 MMP24-AS1A0A0U1RRL7 71 aa13.14□□□□□ -0.31
CPNE1-212ENST00000430570 Q8N9L7 120 aa13.13□□□□□ -0.31
CPNE1-212ENST00000430570 Q8N9P0 234 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-212ENST00000430570 KRTAP19-2Q3LHN2 52 aa13.08□□□□□ -0.32
CPNE1-212ENST00000430570 TMEM254Q8TBM7 123 aa13.06□□□□□ -0.32
CPNE1-212ENST00000430570 hDV103S1A0JD37 113 aa13.05□□□□□ -0.32
CPNE1-212ENST00000430570 MRPL34Q9BQ48 92 aaKnown RBP13.05□□□□□ -0.32
CPNE1-212ENST00000430570 LCE2CQ5TA81 110 aa13.02□□□□□ -0.33
CPNE1-212ENST00000430570 ACYP1P07311 99 aa13.01□□□□□ -0.33
CPNE1-212ENST00000430570 ZCCHC13Q8WW36 166 aaKnown RBP13.01□□□□□ -0.33
CPNE1-212ENST00000430570 LCE2AQ5TA79 106 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-212ENST00000430570 WFDC13Q8IUB5 93 aa12.99□□□□□ -0.33
CPNE1-212ENST00000430570 FAM240AA0A1B0GVK7 77 aa12.98□□□□□ -0.33
CPNE1-212ENST00000430570 CXCL6P80162 114 aa12.95□□□□□ -0.34
CPNE1-212ENST00000430570 CASC2Q6XLA1 102 aa12.94□□□□□ -0.34
CPNE1-212ENST00000430570 NDUFS5O43920 106 aa12.91□□□□□ -0.34
CPNE1-212ENST00000430570 HCG22E2RYF7 251 aa12.88□□□□□ -0.35
CPNE1-212ENST00000430570 COX6B2Q6YFQ2 88 aa12.84□□□□□ -0.35
CPNE1-212ENST00000430570 HRES1P13985 223 aa12.82□□□□□ -0.36
CPNE1-212ENST00000430570 SPINK7P58062 85 aa12.81□□□□□ -0.36
CPNE1-212ENST00000430570 MT1HP80294 61 aa12.81□□□□□ -0.36
CPNE1-212ENST00000430570 Q5W150 140 aa12.79□□□□□ -0.36
CPNE1-212ENST00000430570 ATP5EP2Q5VTU8 51 aa12.77□□□□□ -0.37
CPNE1-212ENST00000430570 LINC00643Q86TS7 51 aa12.76□□□□□ -0.37
CPNE1-212ENST00000430570 MPLKIPQ8TAP9 179 aa12.75□□□□□ -0.37
CPNE1-212ENST00000430570 J3QR89 54 aa12.73□□□□□ -0.37
CPNE1-212ENST00000430570 HIST1H4AP62805 103 aaKnown RBP12.69□□□□□ -0.38
CPNE1-212ENST00000430570 FLGP20930 4061 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-212ENST00000430570 RBM12B-AS1Q9P1G2 102 aa12.65□□□□□ -0.38
CPNE1-212ENST00000430570 FAM236DA0A1B0GTK5 79 aa12.62□□□□□ -0.39
CPNE1-212ENST00000430570 FAM236CP0DP71 79 aa12.62□□□□□ -0.39
CPNE1-212ENST00000430570 IGKV2D-30A0A075B6S6 120 aa12.61□□□□□ -0.39
CPNE1-212ENST00000430570 A0A087WVE0 104 aa12.61□□□□□ -0.39
CPNE1-212ENST00000430570 IGKV2-30P06310 120 aa12.61□□□□□ -0.39
CPNE1-212ENST00000430570 TP53AIP1Q9HCN2 124 aa12.59□□□□□ -0.39
CPNE1-212ENST00000430570 M0R2T5 61 aa12.56□□□□□ -0.4
CPNE1-212ENST00000430570 C7orf65Q6ZTY9 151 aa12.55□□□□□ -0.4
CPNE1-212ENST00000430570 K7ERU9 68 aa12.48□□□□□ -0.41
CPNE1-212ENST00000430570 KRTAP10-6P60371 365 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-212ENST00000430570 LORP23490 312 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-212ENST00000430570 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
CPNE1-212ENST00000430570 UQCRQO14949 82 aa12.37□□□□□ -0.43
CPNE1-212ENST00000430570 C4orf26Q17RF5 130 aa12.36□□□□□ -0.43
CPNE1-212ENST00000430570 MT-ATP8P03928 68 aa12.35□□□□□ -0.43
CPNE1-212ENST00000430570 CYP4F30PQ9H0H9 118 aa12.31□□□□□ -0.44
CPNE1-212ENST00000430570 OCR1Q9BZK8 76 aa12.3□□□□□ -0.44
CPNE1-212ENST00000430570 H0Y9P7 68 aa12.29□□□□□ -0.44
CPNE1-212ENST00000430570 H1FX-AS1Q4G0G2 97 aa12.29□□□□□ -0.44
CPNE1-212ENST00000430570 IMUPQ9GZP8 106 aa12.27□□□□□ -0.45
CPNE1-212ENST00000430570 LOC101927531A0A1B0GV80 90 aa12.25□□□□□ -0.45
CPNE1-212ENST00000430570 KRTAP3-1Q9BYR8 98 aa12.23□□□□□ -0.45
CPNE1-212ENST00000430570 ATOX1O00244 68 aa12.21□□□□□ -0.45
CPNE1-212ENST00000430570 KRTAP9-2Q9BYQ4 174 aa12.21□□□□□ -0.45
CPNE1-212ENST00000430570 KRTAP9-8Q9BYQ0 159 aa12.2□□□□□ -0.46
CPNE1-212ENST00000430570 SCGB1A1P11684 91 aa12.19□□□□□ -0.46
CPNE1-212ENST00000430570 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
CPNE1-212ENST00000430570 LINC00208Q96KT6 92 aa12.15□□□□□ -0.46
CPNE1-212ENST00000430570 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-212ENST00000430570 C5orf47Q569G3 176 aa12.11□□□□□ -0.47
CPNE1-212ENST00000430570 MP68P56378 58 aa12.11□□□□□ -0.47
CPNE1-212ENST00000430570 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
CPNE1-212ENST00000430570 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
CPNE1-212ENST00000430570 MT2AP02795 61 aa12.07□□□□□ -0.48
CPNE1-212ENST00000430570 KLKP1Q107X0 134 aa12.05□□□□□ -0.48
CPNE1-212ENST00000430570 H3BPC8 53 aa11.99□□□□□ -0.49
CPNE1-212ENST00000430570 MT1FP04733 61 aa11.99□□□□□ -0.49
CPNE1-212ENST00000430570 S4R3F8 94 aa11.97□□□□□ -0.49
CPNE1-212ENST00000430570 TRAV7A0A075B6U4 112 aa11.95□□□□□ -0.5
CPNE1-212ENST00000430570 LCA10Q71F78 164 aa11.93□□□□□ -0.5
CPNE1-212ENST00000430570 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
CPNE1-212ENST00000430570 KRTAP10-10P60014 251 aa11.91□□□□□ -0.5
CPNE1-212ENST00000430570 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
CPNE1-212ENST00000430570 CSAG1Q6PB30 78 aa11.82□□□□□ -0.52
CPNE1-212ENST00000430570 KRTAP9-3Q9BYQ3 159 aa11.81□□□□□ -0.52
CPNE1-212ENST00000430570 A8MUN3 132 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms